Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC25Q86WR0 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC25Q86WR0 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.23□□□□□ -0.13
CCDC25Q86WR0 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC25Q86WR0 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC25Q86WR0 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CCDC25Q86WR0 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC25Q86WR0 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC25Q86WR0 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
CCDC25Q86WR0 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC25Q86WR0 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC25Q86WR0 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC25Q86WR0 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC14.23□□□□□ -0.13
CCDC25Q86WR0 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC25Q86WR0 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.23□□□□□ -0.13
CCDC25Q86WR0 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 AC003958.1-201ENST00000435883 421 ntBASIC14.22□□□□□ -0.13
CCDC25Q86WR0 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 MIR4741-201ENST00000579822 90 ntBASIC14.22□□□□□ -0.13
CCDC25Q86WR0 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 AMACR-201ENST00000335606 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC25Q86WR0 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 BRD7P5-201ENST00000299197 1822 ntBASIC14.21□□□□□ -0.13
CCDC25Q86WR0 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 TUBB2BP1-201ENST00000404155 871 ntBASIC14.21□□□□□ -0.13
CCDC25Q86WR0 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.21□□□□□ -0.13
CCDC25Q86WR0 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 HLA-V-201ENST00000429037 534 ntBASIC14.21□□□□□ -0.13
CCDC25Q86WR0 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 RPL18P13-201ENST00000478088 569 ntBASIC14.21□□□□□ -0.13
CCDC25Q86WR0 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.21□□□□□ -0.13
CCDC25Q86WR0 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms