RNA–Protein interactions for RNA: ENST00000440244.1

LINC01623-201, Transcript of long intergenic non-protein coding RNA 1623, humanhuman

TSL 1 (best) BASIC

Gene LINC01623, Length 2,458 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01623-201ENST00000440244 NISCHQ9Y2I1 1504 aa29.38■■■□□ 2.29
LINC01623-201ENST00000440244 CCDC180Q9P1Z9 1646 aa25.44■■□□□ 1.66
LINC01623-201ENST00000440244 ZCCHC6Q5VYS8 1495 aaKnown RBP24.8■■□□□ 1.56
LINC01623-201ENST00000440244 DCAF1Q9Y4B6 1507 aa24.4■■□□□ 1.5
LINC01623-201ENST00000440244 SHROOM4Q9ULL8 1493 aa24.14■■□□□ 1.45
LINC01623-201ENST00000440244 MYO15BQ96JP2 1530 aa23.95■■□□□ 1.42
LINC01623-201ENST00000440244 DCAF8L2P0C7V8 631 aa23.93■■□□□ 1.42
LINC01623-201ENST00000440244 NACADO15069 1562 aa23.57■■□□□ 1.36
LINC01623-201ENST00000440244 SUPT5HO00267 1087 aaKnown RBP23.53■■□□□ 1.36
LINC01623-201ENST00000440244 ABCC9O60706 1549 aa23.42■■□□□ 1.34
LINC01623-201ENST00000440244 SCRIBQ14160 1630 aa23.32■■□□□ 1.32
LINC01623-201ENST00000440244 RB1CC1Q8TDY2 1594 aa23.22■■□□□ 1.31
LINC01623-201ENST00000440244 RSF1Q96T23 1441 aaPredicted RBP22.97■■□□□ 1.27
LINC01623-201ENST00000440244 CHIC1Q5VXU3 224 aa22.88■■□□□ 1.25
LINC01623-201ENST00000440244 CECR2Q9BXF3 1484 aa22.69■■□□□ 1.22
LINC01623-201ENST00000440244 UNC13AQ9UPW8 1703 aa22.68■■□□□ 1.22
LINC01623-201ENST00000440244 BAZ1AQ9NRL2 1556 aaPredicted RBP22.68■■□□□ 1.22
LINC01623-201ENST00000440244 MROH2BQ7Z745 1585 aa22.65■■□□□ 1.22
LINC01623-201ENST00000440244 WIZO95785 1651 aa22.48■■□□□ 1.19
LINC01623-201ENST00000440244 SMARCA4P51532 1647 aa22.47■■□□□ 1.19
LINC01623-201ENST00000440244 BICRAQ9NZM4 1560 aa22.44■■□□□ 1.18
LINC01623-201ENST00000440244 TOP2AP11388 1531 aaKnown RBP22.35■■□□□ 1.17
LINC01623-201ENST00000440244 PEG3Q9GZU2 1588 aa22.24■■□□□ 1.15
LINC01623-201ENST00000440244 TRIM41Q8WV44 630 aa22.18■■□□□ 1.14
LINC01623-201ENST00000440244 EIF4G1Q04637 1599 aaKnown RBP22.17■■□□□ 1.14
LINC01623-201ENST00000440244 PABPN1Q86U42 306 aaKnown RBP eCLIP22.14■■□□□ 1.13
LINC01623-201ENST00000440244 SMARCA2P51531 1590 aa22.12■■□□□ 1.13
LINC01623-201ENST00000440244 CCDC88BA6NC98 1476 aa22.08■■□□□ 1.13
LINC01623-201ENST00000440244 ATAD2BQ9ULI0 1458 aa21.97■■□□□ 1.11
LINC01623-201ENST00000440244 LOC105371045A0A1W2PR82 267 aa21.92■■□□□ 1.1
LINC01623-201ENST00000440244 BAZ1BQ9UIG0 1483 aaKnown RBP21.87■■□□□ 1.09
LINC01623-201ENST00000440244 HMGXB3Q12766 1538 aa21.77■■□□□ 1.08
LINC01623-201ENST00000440244 NCAPD3P42695 1498 aa21.74■■□□□ 1.07
LINC01623-201ENST00000440244 ABCC8Q09428 1581 aa21.72■■□□□ 1.07
LINC01623-201ENST00000440244 EEA1Q15075 1411 aa21.7■■□□□ 1.06
LINC01623-201ENST00000440244 FAM9AQ8IZU1 332 aaPredicted RBP21.65■■□□□ 1.06
LINC01623-201ENST00000440244 WRNQ14191 1432 aaPredicted RBP eCLIP21.62■■□□□ 1.05
LINC01623-201ENST00000440244 PCGF6Q9BYE7 350 aa21.52■■□□□ 1.04
LINC01623-201ENST00000440244 TRIM26Q12899 539 aaPredicted RBP21.51■■□□□ 1.03
LINC01623-201ENST00000440244 HRCP23327 699 aa21.5■■□□□ 1.03
LINC01623-201ENST00000440244 SYNJ1O43426 1573 aa21.46■■□□□ 1.03
LINC01623-201ENST00000440244 SOGA1O94964 1423 aa21.44■■□□□ 1.02
LINC01623-201ENST00000440244 CSRNP3Q8WYN3 585 aa21.41■■□□□ 1.02
LINC01623-201ENST00000440244 TOP2BQ02880 1626 aa21.4■■□□□ 1.02
LINC01623-201ENST00000440244 TNIKQ9UKE5 1360 aa21.39■■□□□ 1.01
LINC01623-201ENST00000440244 CFTRP13569 1480 aa21.38■■□□□ 1.01
LINC01623-201ENST00000440244 BIVM-ERCC5R4GMW8 1640 aa21.38■■□□□ 1.01
LINC01623-201ENST00000440244 GOLGA3Q08378 1498 aa21.34■■□□□ 1.01
LINC01623-201ENST00000440244 PRDM2Q13029 1718 aa21.32■■□□□ 1
LINC01623-201ENST00000440244 KIF21BO75037 1637 aa21.32■■□□□ 1
LINC01623-201ENST00000440244 CEP164Q9UPV0 1460 aa21.3■■□□□ 1
LINC01623-201ENST00000440244 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
LINC01623-201ENST00000440244 CC2D2AQ9P2K1 1620 aa21.26■□□□□ 0.99
LINC01623-201ENST00000440244 CEP162Q5TB80 1403 aa21.25■□□□□ 0.99
LINC01623-201ENST00000440244 EHMT2Q96KQ7 1210 aa21.22■□□□□ 0.99
LINC01623-201ENST00000440244 CADPSQ9ULU8 1353 aa21.19■□□□□ 0.98
LINC01623-201ENST00000440244 CUX1P39880 1505 aa21.16■□□□□ 0.98
LINC01623-201ENST00000440244 PPARGC1BQ86YN6 1023 aaKnown RBP21.15■□□□□ 0.98
LINC01623-201ENST00000440244 UBTFP17480 764 aaKnown RBP21.14■□□□□ 0.97
LINC01623-201ENST00000440244 ERICH3Q5RHP9 1530 aa21.11■□□□□ 0.97
LINC01623-201ENST00000440244 PELP1Q8IZL8 1130 aaKnown RBP21.11■□□□□ 0.97
LINC01623-201ENST00000440244 KIF27Q86VH2 1401 aa21.06■□□□□ 0.96
LINC01623-201ENST00000440244 PRXQ9BXM0 1461 aa21.04■□□□□ 0.96
LINC01623-201ENST00000440244 ZEB1P37275 1124 aaPredicted RBP21.02■□□□□ 0.96
LINC01623-201ENST00000440244 RAPGEF2Q9Y4G8 1499 aa21.01■□□□□ 0.95
LINC01623-201ENST00000440244 CLIP1P30622 1438 aa20.98■□□□□ 0.95
LINC01623-201ENST00000440244 FANCD2Q9BXW9 1451 aa20.93■□□□□ 0.94
LINC01623-201ENST00000440244 LAMC3Q9Y6N6 1575 aa20.91■□□□□ 0.94
LINC01623-201ENST00000440244 VPS8Q8N3P4 1428 aa20.9■□□□□ 0.94
LINC01623-201ENST00000440244 DNMBPQ6XZF7 1577 aa20.87■□□□□ 0.93
LINC01623-201ENST00000440244 FGD5Q6ZNL6 1462 aa20.86■□□□□ 0.93
LINC01623-201ENST00000440244 CUX2O14529 1486 aa20.82■□□□□ 0.92
LINC01623-201ENST00000440244 IGF1RP08069 1367 aa20.77■□□□□ 0.92
LINC01623-201ENST00000440244 TOPBP1Q92547 1522 aa20.76■□□□□ 0.91
LINC01623-201ENST00000440244 ABCA10Q8WWZ4 1543 aa20.75■□□□□ 0.91
LINC01623-201ENST00000440244 PDS5BQ9NTI5 1447 aa20.73■□□□□ 0.91
LINC01623-201ENST00000440244 APLP2Q06481 763 aa20.71■□□□□ 0.91
LINC01623-201ENST00000440244 NESP48681 1621 aa20.71■□□□□ 0.91
LINC01623-201ENST00000440244 POLA1P09884 1462 aaPredicted RBP20.69■□□□□ 0.9
LINC01623-201ENST00000440244 CARMIL1Q5VZK9 1371 aa20.69■□□□□ 0.9
LINC01623-201ENST00000440244 ARAP1Q96P48 1450 aa20.68■□□□□ 0.9
LINC01623-201ENST00000440244 CUL7Q14999 1698 aa20.63■□□□□ 0.89
LINC01623-201ENST00000440244 WDR97A6NE52 1622 aa20.61■□□□□ 0.89
LINC01623-201ENST00000440244 URB2Q14146 1524 aaKnown RBP20.6■□□□□ 0.89
LINC01623-201ENST00000440244 ARHGAP35Q9NRY4 1499 aa20.6■□□□□ 0.89
LINC01623-201ENST00000440244 SCAF1Q9H7N4 1312 aaKnown RBP20.59■□□□□ 0.89
LINC01623-201ENST00000440244 RAD54L2Q9Y4B4 1467 aa20.57■□□□□ 0.88
LINC01623-201ENST00000440244 MAP3K1Q13233 1512 aa20.53■□□□□ 0.88
LINC01623-201ENST00000440244 ABCA5Q8WWZ7 1642 aa20.51■□□□□ 0.87
LINC01623-201ENST00000440244 KIF21AQ7Z4S6 1674 aa20.51■□□□□ 0.87
LINC01623-201ENST00000440244 CCER1Q8TC90 406 aaPredicted RBP20.51■□□□□ 0.87
LINC01623-201ENST00000440244 TTBK1Q5TCY1 1321 aaPredicted RBP20.49■□□□□ 0.87
LINC01623-201ENST00000440244 RANGAP1P46060 587 aaPredicted RBP20.48■□□□□ 0.87
LINC01623-201ENST00000440244 EFCAB5A4FU69 1503 aa20.48■□□□□ 0.87
LINC01623-201ENST00000440244 FHAD1B1AJZ9 1412 aa20.47■□□□□ 0.87
LINC01623-201ENST00000440244 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.45■□□□□ 0.86
LINC01623-201ENST00000440244 CTTNBP2Q8WZ74 1663 aa20.43■□□□□ 0.86
LINC01623-201ENST00000440244 GAPVD1Q14C86 1478 aa20.43■□□□□ 0.86
LINC01623-201ENST00000440244 TARBP1Q13395 1621 aaKnown RBP20.41■□□□□ 0.86
LINC01623-201ENST00000440244 MRC2Q9UBG0 1479 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms