RNA–Protein interactions for RNA: ENST00000410020.7

DYSF-208, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-208ENST00000410020 NISCHQ9Y2I1 1504 aa21.54■■□□□ 1.04
DYSF-208ENST00000410020 DCAF8L2P0C7V8 631 aa21.28■■□□□ 1
DYSF-208ENST00000410020 SUPT5HO00267 1087 aaKnown RBP21.01■□□□□ 0.95
DYSF-208ENST00000410020 SHROOM4Q9ULL8 1493 aa20.59■□□□□ 0.89
DYSF-208ENST00000410020 PCGF6Q9BYE7 350 aa20.21■□□□□ 0.83
DYSF-208ENST00000410020 PELP1Q8IZL8 1130 aaKnown RBP20.03■□□□□ 0.8
DYSF-208ENST00000410020 EHMT2Q96KQ7 1210 aa19.92■□□□□ 0.78
DYSF-208ENST00000410020 ZEB1P37275 1124 aaPredicted RBP19.92■□□□□ 0.78
DYSF-208ENST00000410020 CENPBP07199 599 aaPredicted RBP19.75■□□□□ 0.75
DYSF-208ENST00000410020 HRCP23327 699 aa19.74■□□□□ 0.75
DYSF-208ENST00000410020 FAM9AQ8IZU1 332 aaPredicted RBP19.69■□□□□ 0.74
DYSF-208ENST00000410020 MYT1Q01538 1121 aa19.62■□□□□ 0.73
DYSF-208ENST00000410020 APLP2Q06481 763 aa19.57■□□□□ 0.72
DYSF-208ENST00000410020 CCER1Q8TC90 406 aaPredicted RBP19.5■□□□□ 0.71
DYSF-208ENST00000410020 TRIM41Q8WV44 630 aa19.48■□□□□ 0.71
DYSF-208ENST00000410020 TRIM26Q12899 539 aaPredicted RBP19.44■□□□□ 0.7
DYSF-208ENST00000410020 TTBK1Q5TCY1 1321 aaPredicted RBP19.38■□□□□ 0.69
DYSF-208ENST00000410020 CHIC1Q5VXU3 224 aa19.31■□□□□ 0.68
DYSF-208ENST00000410020 PPARGC1BQ86YN6 1023 aaKnown RBP19.19■□□□□ 0.66
DYSF-208ENST00000410020 YTHDC1Q96MU7 727 aaKnown RBP19.13■□□□□ 0.65
DYSF-208ENST00000410020 ERICH6Q7L0X2 663 aa19.09■□□□□ 0.65
DYSF-208ENST00000410020 LOC105371045A0A1W2PR82 267 aa19.09■□□□□ 0.65
DYSF-208ENST00000410020 UBTFP17480 764 aaKnown RBP19.01■□□□□ 0.63
DYSF-208ENST00000410020 NEFLP07196 543 aa18.95■□□□□ 0.62
DYSF-208ENST00000410020 RANGAP1P46060 587 aaPredicted RBP18.9■□□□□ 0.62
DYSF-208ENST00000410020 DIEXFQ68CQ4 756 aaKnown RBP18.76■□□□□ 0.59
DYSF-208ENST00000410020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.7■□□□□ 0.58
DYSF-208ENST00000410020 ATP1B4Q9UN42 357 aaPredicted RBP18.61■□□□□ 0.57
DYSF-208ENST00000410020 GTF3C3Q9Y5Q9 886 aa18.6■□□□□ 0.57
DYSF-208ENST00000410020 HNRNPUL2Q1KMD3 747 aaKnown RBP18.57■□□□□ 0.56
DYSF-208ENST00000410020 ACIN1Q9UKV3 1341 aaKnown RBP18.51■□□□□ 0.55
DYSF-208ENST00000410020 DCAF1Q9Y4B6 1507 aa18.4■□□□□ 0.54
DYSF-208ENST00000410020 ITGAEP38570 1179 aa18.36■□□□□ 0.53
DYSF-208ENST00000410020 ZNF316A6NFI3 1004 aaPredicted RBP18.34■□□□□ 0.53
DYSF-208ENST00000410020 SCAF1Q9H7N4 1312 aaKnown RBP18.15■□□□□ 0.5
DYSF-208ENST00000410020 DAXXQ9UER7 740 aaPredicted RBP18.14■□□□□ 0.49
DYSF-208ENST00000410020 BCANQ96GW7 911 aa18.11■□□□□ 0.49
DYSF-208ENST00000410020 RTL5Q5HYW3 569 aaPredicted RBP18.11■□□□□ 0.49
DYSF-208ENST00000410020 NEUROD1Q13562 356 aa18.1■□□□□ 0.49
DYSF-208ENST00000410020 CLSPNQ9HAW4 1339 aa18.1■□□□□ 0.49
DYSF-208ENST00000410020 POLR3GLQ9BT43 218 aa18.02■□□□□ 0.47
DYSF-208ENST00000410020 ZCCHC6Q5VYS8 1495 aaKnown RBP18■□□□□ 0.47
DYSF-208ENST00000410020 MYT1LQ9UL68 1186 aa18■□□□□ 0.47
DYSF-208ENST00000410020 ANP32CO43423 234 aa17.99■□□□□ 0.47
DYSF-208ENST00000410020 CDK11AQ9UQ88 783 aaPredicted RBP17.98■□□□□ 0.47
DYSF-208ENST00000410020 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
DYSF-208ENST00000410020 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
DYSF-208ENST00000410020 FAM50AQ14320 339 aaKnown RBP17.93■□□□□ 0.46
DYSF-208ENST00000410020 CNGB1Q14028 1251 aaPredicted RBP17.88■□□□□ 0.45
DYSF-208ENST00000410020 FKBP8Q14318 412 aa17.77■□□□□ 0.43
DYSF-208ENST00000410020 CCDC180Q9P1Z9 1646 aa17.76■□□□□ 0.43
DYSF-208ENST00000410020 MIER1Q8N108 512 aa17.74■□□□□ 0.43
DYSF-208ENST00000410020 TRIM52Q96A61 297 aa17.74■□□□□ 0.43
DYSF-208ENST00000410020 ANP32AP39687 249 aaKnown RBP17.65■□□□□ 0.42
DYSF-208ENST00000410020 ABCC9O60706 1549 aa17.65■□□□□ 0.42
DYSF-208ENST00000410020 DDX10Q13206 875 aaKnown RBP17.58■□□□□ 0.41
DYSF-208ENST00000410020 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
DYSF-208ENST00000410020 SLC4A1APQ9BWU0 796 aaKnown RBP17.55■□□□□ 0.4
DYSF-208ENST00000410020 HNRNPUQ00839 825 aaKnown RBP eCLIP17.54■□□□□ 0.4
DYSF-208ENST00000410020 TONSLQ96HA7 1378 aa17.5■□□□□ 0.39
DYSF-208ENST00000410020 ZNF326Q5BKZ1 582 aaKnown RBP17.5■□□□□ 0.39
DYSF-208ENST00000410020 ANP32EQ9BTT0 268 aa17.5■□□□□ 0.39
DYSF-208ENST00000410020 SCRIBQ14160 1630 aa17.47■□□□□ 0.39
DYSF-208ENST00000410020 RSF1Q96T23 1441 aaPredicted RBP17.46■□□□□ 0.39
DYSF-208ENST00000410020 CEP162Q5TB80 1403 aa17.45■□□□□ 0.38
DYSF-208ENST00000410020 CLIP1P30622 1438 aa17.42■□□□□ 0.38
DYSF-208ENST00000410020 EEA1Q15075 1411 aa17.42■□□□□ 0.38
DYSF-208ENST00000410020 NPM2Q86SE8 214 aaKnown RBP17.4■□□□□ 0.38
DYSF-208ENST00000410020 P3H3Q8IVL6 736 aa17.4■□□□□ 0.38
DYSF-208ENST00000410020 FAM9BQ8IZU0 186 aa17.36■□□□□ 0.37
DYSF-208ENST00000410020 TNIKQ9UKE5 1360 aa17.35■□□□□ 0.37
DYSF-208ENST00000410020 ZBTB47Q9UFB7 747 aaPredicted RBP17.33■□□□□ 0.37
DYSF-208ENST00000410020 GOLGA3Q08378 1498 aa17.33■□□□□ 0.36
DYSF-208ENST00000410020 CCDC136Q96JN2 1154 aa17.32■□□□□ 0.36
DYSF-208ENST00000410020 SUPT16HQ9Y5B9 1047 aaKnown RBP17.32■□□□□ 0.36
DYSF-208ENST00000410020 NBR1Q14596 966 aa17.3■□□□□ 0.36
DYSF-208ENST00000410020 EIF5BO60841 1220 aaKnown RBP17.28■□□□□ 0.36
DYSF-208ENST00000410020 MRS2Q9HD23 443 aa17.27■□□□□ 0.35
DYSF-208ENST00000410020 CANXP27824 592 aaKnown RBP17.26■□□□□ 0.35
DYSF-208ENST00000410020 IRX6P78412 446 aaPredicted RBP17.25■□□□□ 0.35
DYSF-208ENST00000410020 FBLN2P98095 1184 aa17.24■□□□□ 0.35
DYSF-208ENST00000410020 HIRIP3Q9BW71 556 aaPredicted RBP17.2■□□□□ 0.34
DYSF-208ENST00000410020 TMC1Q8TDI8 760 aa17.17■□□□□ 0.34
DYSF-208ENST00000410020 EIF4G2P78344 907 aaKnown RBP eCLIP17.15■□□□□ 0.34
DYSF-208ENST00000410020 RB1CC1Q8TDY2 1594 aa17.15■□□□□ 0.34
DYSF-208ENST00000410020 CEP164Q9UPV0 1460 aa17.14■□□□□ 0.33
DYSF-208ENST00000410020 ARID3CA6NKF2 412 aa17.13■□□□□ 0.33
DYSF-208ENST00000410020 WRNQ14191 1432 aaPredicted RBP eCLIP17.11■□□□□ 0.33
DYSF-208ENST00000410020 UPF2Q9HAU5 1272 aaKnown RBP17.1■□□□□ 0.33
DYSF-208ENST00000410020 GLIPR1L2Q4G1C9 344 aa17.09■□□□□ 0.33
DYSF-208ENST00000410020 BCL11AQ9H165 835 aa17.09■□□□□ 0.33
DYSF-208ENST00000410020 PPP4R2Q9NY27 417 aa17.08■□□□□ 0.32
DYSF-208ENST00000410020 CHIC2Q9UKJ5 165 aa17.08■□□□□ 0.32
DYSF-208ENST00000410020 ZNF777Q9ULD5 760 aaPredicted RBP17.08■□□□□ 0.32
DYSF-208ENST00000410020 MTUS2Q5JR59 1369 aa17.07■□□□□ 0.32
DYSF-208ENST00000410020 SALL2Q9Y467 1007 aaPredicted RBP17.06■□□□□ 0.32
DYSF-208ENST00000410020 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.05■□□□□ 0.32
DYSF-208ENST00000410020 RBM19Q9Y4C8 960 aaKnown RBP17.03■□□□□ 0.32
DYSF-208ENST00000410020 ANP32BQ92688 251 aaKnown RBP17.03■□□□□ 0.32
DYSF-208ENST00000410020 DDRGK1Q96HY6 314 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms