RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-223ENST00000637033 NISCHQ9Y2I1 1504 aa25.45■■□□□ 1.66
CHRNA7-223ENST00000637033 SHROOM4Q9ULL8 1493 aa22.97■■□□□ 1.27
CHRNA7-223ENST00000637033 SUPT5HO00267 1087 aaKnown RBP22.7■■□□□ 1.22
CHRNA7-223ENST00000637033 DCAF8L2P0C7V8 631 aa22.24■■□□□ 1.15
CHRNA7-223ENST00000637033 PCGF6Q9BYE7 350 aa21.84■■□□□ 1.09
CHRNA7-223ENST00000637033 CHIC1Q5VXU3 224 aa21.79■■□□□ 1.08
CHRNA7-223ENST00000637033 MYO15BQ96JP2 1530 aa21.77■■□□□ 1.08
CHRNA7-223ENST00000637033 PPARGC1BQ86YN6 1023 aaKnown RBP21.7■■□□□ 1.07
CHRNA7-223ENST00000637033 HRCP23327 699 aa21.67■■□□□ 1.06
CHRNA7-223ENST00000637033 LOC105371045A0A1W2PR82 267 aa21.57■■□□□ 1.04
CHRNA7-223ENST00000637033 ZCCHC6Q5VYS8 1495 aaKnown RBP21.5■■□□□ 1.03
CHRNA7-223ENST00000637033 EHMT2Q96KQ7 1210 aa21.33■■□□□ 1
CHRNA7-223ENST00000637033 FAM9AQ8IZU1 332 aaPredicted RBP21.13■□□□□ 0.97
CHRNA7-223ENST00000637033 CCDC180Q9P1Z9 1646 aa20.98■□□□□ 0.95
CHRNA7-223ENST00000637033 TRIM26Q12899 539 aaPredicted RBP20.91■□□□□ 0.94
CHRNA7-223ENST00000637033 TRIM41Q8WV44 630 aa20.82■□□□□ 0.92
CHRNA7-223ENST00000637033 DCAF1Q9Y4B6 1507 aa20.79■□□□□ 0.92
CHRNA7-223ENST00000637033 TTBK1Q5TCY1 1321 aaPredicted RBP20.63■□□□□ 0.89
CHRNA7-223ENST00000637033 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
CHRNA7-223ENST00000637033 RSF1Q96T23 1441 aaPredicted RBP20.48■□□□□ 0.87
CHRNA7-223ENST00000637033 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.44■□□□□ 0.86
CHRNA7-223ENST00000637033 SCAF1Q9H7N4 1312 aaKnown RBP20.39■□□□□ 0.85
CHRNA7-223ENST00000637033 ZEB1P37275 1124 aaPredicted RBP20.38■□□□□ 0.85
CHRNA7-223ENST00000637033 RB1CC1Q8TDY2 1594 aa20.34■□□□□ 0.85
CHRNA7-223ENST00000637033 ABCC9O60706 1549 aa20.3■□□□□ 0.84
CHRNA7-223ENST00000637033 CCER1Q8TC90 406 aaPredicted RBP20.29■□□□□ 0.84
CHRNA7-223ENST00000637033 CECR2Q9BXF3 1484 aa20.21■□□□□ 0.83
CHRNA7-223ENST00000637033 NEUROD1Q13562 356 aa20.06■□□□□ 0.8
CHRNA7-223ENST00000637033 MROH2BQ7Z745 1585 aa20.02■□□□□ 0.8
CHRNA7-223ENST00000637033 DIEXFQ68CQ4 756 aaKnown RBP19.97■□□□□ 0.79
CHRNA7-223ENST00000637033 YTHDC1Q96MU7 727 aaKnown RBP19.97■□□□□ 0.79
CHRNA7-223ENST00000637033 RANGAP1P46060 587 aaPredicted RBP19.95■□□□□ 0.78
CHRNA7-223ENST00000637033 GTF3C3Q9Y5Q9 886 aa19.93■□□□□ 0.78
CHRNA7-223ENST00000637033 ACIN1Q9UKV3 1341 aaKnown RBP19.93■□□□□ 0.78
CHRNA7-223ENST00000637033 UBTFP17480 764 aaKnown RBP19.92■□□□□ 0.78
CHRNA7-223ENST00000637033 WIZO95785 1651 aa19.92■□□□□ 0.78
CHRNA7-223ENST00000637033 PELP1Q8IZL8 1130 aaKnown RBP19.83■□□□□ 0.77
CHRNA7-223ENST00000637033 HNRNPUL2Q1KMD3 747 aaKnown RBP19.81■□□□□ 0.76
CHRNA7-223ENST00000637033 ABCC8Q09428 1581 aa19.8■□□□□ 0.76
CHRNA7-223ENST00000637033 CCDC88BA6NC98 1476 aa19.76■□□□□ 0.75
CHRNA7-223ENST00000637033 SOGA1O94964 1423 aa19.74■□□□□ 0.75
CHRNA7-223ENST00000637033 CENPBP07199 599 aaPredicted RBP19.72■□□□□ 0.75
CHRNA7-223ENST00000637033 PABPN1Q86U42 306 aaKnown RBP eCLIP19.7■□□□□ 0.74
CHRNA7-223ENST00000637033 CEP162Q5TB80 1403 aa19.67■□□□□ 0.74
CHRNA7-223ENST00000637033 RUSC2Q8N2Y8 1516 aa19.66■□□□□ 0.74
CHRNA7-223ENST00000637033 CSRNP3Q8WYN3 585 aa19.64■□□□□ 0.73
CHRNA7-223ENST00000637033 ZNF316A6NFI3 1004 aaPredicted RBP19.59■□□□□ 0.73
CHRNA7-223ENST00000637033 MIER1Q8N108 512 aa19.58■□□□□ 0.72
CHRNA7-223ENST00000637033 NACADO15069 1562 aa19.55■□□□□ 0.72
CHRNA7-223ENST00000637033 BAZ1AQ9NRL2 1556 aaPredicted RBP19.48■□□□□ 0.71
CHRNA7-223ENST00000637033 TNIKQ9UKE5 1360 aa19.44■□□□□ 0.7
CHRNA7-223ENST00000637033 APLP2Q06481 763 aa19.43■□□□□ 0.7
CHRNA7-223ENST00000637033 WRNQ14191 1432 aaPredicted RBP eCLIP19.37■□□□□ 0.69
CHRNA7-223ENST00000637033 EIF4G1Q04637 1599 aaKnown RBP19.37■□□□□ 0.69
CHRNA7-223ENST00000637033 SMARCA2P51531 1590 aa19.33■□□□□ 0.69
CHRNA7-223ENST00000637033 ITGAEP38570 1179 aa19.32■□□□□ 0.68
CHRNA7-223ENST00000637033 TOP2AP11388 1531 aaKnown RBP19.32■□□□□ 0.68
CHRNA7-223ENST00000637033 SMARCA4P51532 1647 aa19.26■□□□□ 0.67
CHRNA7-223ENST00000637033 GOLGA3Q08378 1498 aa19.26■□□□□ 0.67
CHRNA7-223ENST00000637033 CLIP1P30622 1438 aa19.25■□□□□ 0.67
CHRNA7-223ENST00000637033 KANK4Q5T7N3 995 aaPredicted RBP19.14■□□□□ 0.66
CHRNA7-223ENST00000637033 RAPGEF2Q9Y4G8 1499 aa19.14■□□□□ 0.65
CHRNA7-223ENST00000637033 EEA1Q15075 1411 aa19.12■□□□□ 0.65
CHRNA7-223ENST00000637033 CEP164Q9UPV0 1460 aa19.07■□□□□ 0.64
CHRNA7-223ENST00000637033 SYNJ1O43426 1573 aa19.07■□□□□ 0.64
CHRNA7-223ENST00000637033 KCNH8Q96L42 1107 aa19.06■□□□□ 0.64
CHRNA7-223ENST00000637033 VPS8Q8N3P4 1428 aa19.05■□□□□ 0.64
CHRNA7-223ENST00000637033 BCANQ96GW7 911 aa19.03■□□□□ 0.64
CHRNA7-223ENST00000637033 ATP1B4Q9UN42 357 aaPredicted RBP18.99■□□□□ 0.63
CHRNA7-223ENST00000637033 HIRIP3Q9BW71 556 aaPredicted RBP18.98■□□□□ 0.63
CHRNA7-223ENST00000637033 UNC13AQ9UPW8 1703 aa18.96■□□□□ 0.63
CHRNA7-223ENST00000637033 SUPT16HQ9Y5B9 1047 aaKnown RBP18.96■□□□□ 0.63
CHRNA7-223ENST00000637033 DHX57Q6P158 1386 aaKnown RBP18.94■□□□□ 0.62
CHRNA7-223ENST00000637033 KIF21BO75037 1637 aa18.92■□□□□ 0.62
CHRNA7-223ENST00000637033 P3H3Q8IVL6 736 aa18.9■□□□□ 0.62
CHRNA7-223ENST00000637033 BAZ1BQ9UIG0 1483 aaKnown RBP18.87■□□□□ 0.61
CHRNA7-223ENST00000637033 DDX10Q13206 875 aaKnown RBP18.85■□□□□ 0.61
CHRNA7-223ENST00000637033 SIN3AQ96ST3 1273 aa18.84■□□□□ 0.61
CHRNA7-223ENST00000637033 ATAD2BQ9ULI0 1458 aa18.84■□□□□ 0.61
CHRNA7-223ENST00000637033 FAM50AQ14320 339 aaKnown RBP18.83■□□□□ 0.61
CHRNA7-223ENST00000637033 BICRAQ9NZM4 1560 aa18.82■□□□□ 0.6
CHRNA7-223ENST00000637033 ARAP1Q96P48 1450 aa18.77■□□□□ 0.6
CHRNA7-223ENST00000637033 MYT1Q01538 1121 aa18.76■□□□□ 0.59
CHRNA7-223ENST00000637033 TRIM52Q96A61 297 aa18.74■□□□□ 0.59
CHRNA7-223ENST00000637033 TSHZ2Q9NRE2 1034 aa18.74■□□□□ 0.59
CHRNA7-223ENST00000637033 FKBP8Q14318 412 aa18.73■□□□□ 0.59
CHRNA7-223ENST00000637033 CCNB3Q8WWL7 1395 aa18.7■□□□□ 0.58
CHRNA7-223ENST00000637033 RAB3GAP2Q9H2M9 1393 aa18.68■□□□□ 0.58
CHRNA7-223ENST00000637033 CLSPNQ9HAW4 1339 aa18.64■□□□□ 0.57
CHRNA7-223ENST00000637033 PRXQ9BXM0 1461 aa18.62■□□□□ 0.57
CHRNA7-223ENST00000637033 KIF27Q86VH2 1401 aa18.59■□□□□ 0.57
CHRNA7-223ENST00000637033 TOP2BQ02880 1626 aa18.58■□□□□ 0.57
CHRNA7-223ENST00000637033 ARHGAP35Q9NRY4 1499 aa18.57■□□□□ 0.56
CHRNA7-223ENST00000637033 PEG3Q9GZU2 1588 aa18.56■□□□□ 0.56
CHRNA7-223ENST00000637033 IRX6P78412 446 aaPredicted RBP18.56■□□□□ 0.56
CHRNA7-223ENST00000637033 RRBP1Q9P2E9 1410 aaKnown RBP18.55■□□□□ 0.56
CHRNA7-223ENST00000637033 CUX1P39880 1505 aa18.54■□□□□ 0.56
CHRNA7-223ENST00000637033 PHLDB1Q86UU1 1377 aa18.51■□□□□ 0.55
CHRNA7-223ENST00000637033 CUX2O14529 1486 aa18.5■□□□□ 0.55
CHRNA7-223ENST00000637033 CNGB1Q14028 1251 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms