RNA–Protein interactions for RNA: ENST00000335606.10

AMACR-201, Transcript of alpha-methylacyl-CoA racemase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMACR, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMACR-201ENST00000335606 NISCHQ9Y2I1 1504 aa23.68■■□□□ 1.38
AMACR-201ENST00000335606 DCAF8L2P0C7V8 631 aa23.07■■□□□ 1.28
AMACR-201ENST00000335606 SHROOM4Q9ULL8 1493 aa22.48■■□□□ 1.19
AMACR-201ENST00000335606 SUPT5HO00267 1087 aaKnown RBP22.41■■□□□ 1.18
AMACR-201ENST00000335606 EHMT2Q96KQ7 1210 aa21.6■■□□□ 1.05
AMACR-201ENST00000335606 FAM9AQ8IZU1 332 aaPredicted RBP21.07■□□□□ 0.96
AMACR-201ENST00000335606 PCGF6Q9BYE7 350 aa20.92■□□□□ 0.94
AMACR-201ENST00000335606 TTBK1Q5TCY1 1321 aaPredicted RBP20.77■□□□□ 0.92
AMACR-201ENST00000335606 LOC105371045A0A1W2PR82 267 aa20.58■□□□□ 0.89
AMACR-201ENST00000335606 PPARGC1BQ86YN6 1023 aaKnown RBP20.51■□□□□ 0.87
AMACR-201ENST00000335606 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
AMACR-201ENST00000335606 TRIM41Q8WV44 630 aa20.47■□□□□ 0.87
AMACR-201ENST00000335606 RANGAP1P46060 587 aaPredicted RBP20.41■□□□□ 0.86
AMACR-201ENST00000335606 ABCC9O60706 1549 aa20.02■□□□□ 0.8
AMACR-201ENST00000335606 UBTFP17480 764 aaKnown RBP19.97■□□□□ 0.79
AMACR-201ENST00000335606 HRCP23327 699 aa19.95■□□□□ 0.78
AMACR-201ENST00000335606 CCER1Q8TC90 406 aaPredicted RBP19.89■□□□□ 0.77
AMACR-201ENST00000335606 PABPN1Q86U42 306 aaKnown RBP eCLIP19.87■□□□□ 0.77
AMACR-201ENST00000335606 APLP2Q06481 763 aa19.85■□□□□ 0.77
AMACR-201ENST00000335606 TRIM26Q12899 539 aaPredicted RBP19.81■□□□□ 0.76
AMACR-201ENST00000335606 ZCCHC6Q5VYS8 1495 aaKnown RBP19.72■□□□□ 0.75
AMACR-201ENST00000335606 ATP1B4Q9UN42 357 aaPredicted RBP19.69■□□□□ 0.74
AMACR-201ENST00000335606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.63■□□□□ 0.73
AMACR-201ENST00000335606 MYO15BQ96JP2 1530 aa19.61■□□□□ 0.73
AMACR-201ENST00000335606 YTHDC1Q96MU7 727 aaKnown RBP19.54■□□□□ 0.72
AMACR-201ENST00000335606 HNRNPUL2Q1KMD3 747 aaKnown RBP19.53■□□□□ 0.72
AMACR-201ENST00000335606 ITGAEP38570 1179 aa19.48■□□□□ 0.71
AMACR-201ENST00000335606 SCRIBQ14160 1630 aa19.48■□□□□ 0.71
AMACR-201ENST00000335606 ZEB1P37275 1124 aaPredicted RBP19.47■□□□□ 0.71
AMACR-201ENST00000335606 CCDC180Q9P1Z9 1646 aa19.2■□□□□ 0.66
AMACR-201ENST00000335606 CENPBP07199 599 aaPredicted RBP19.12■□□□□ 0.65
AMACR-201ENST00000335606 RSF1Q96T23 1441 aaPredicted RBP19.1■□□□□ 0.65
AMACR-201ENST00000335606 CSRNP3Q8WYN3 585 aa19.02■□□□□ 0.64
AMACR-201ENST00000335606 DIEXFQ68CQ4 756 aaKnown RBP19.01■□□□□ 0.63
AMACR-201ENST00000335606 CECR2Q9BXF3 1484 aa18.98■□□□□ 0.63
AMACR-201ENST00000335606 P3H3Q8IVL6 736 aa18.96■□□□□ 0.63
AMACR-201ENST00000335606 CNGB1Q14028 1251 aaPredicted RBP18.95■□□□□ 0.62
AMACR-201ENST00000335606 DCAF1Q9Y4B6 1507 aa18.86■□□□□ 0.61
AMACR-201ENST00000335606 FAM50AQ14320 339 aaKnown RBP18.85■□□□□ 0.61
AMACR-201ENST00000335606 ARID3CA6NKF2 412 aa18.83■□□□□ 0.6
AMACR-201ENST00000335606 NEUROD1Q13562 356 aa18.8■□□□□ 0.6
AMACR-201ENST00000335606 POLR3GLQ9BT43 218 aa18.72■□□□□ 0.59
AMACR-201ENST00000335606 GTF3C3Q9Y5Q9 886 aa18.71■□□□□ 0.59
AMACR-201ENST00000335606 RB1CC1Q8TDY2 1594 aa18.71■□□□□ 0.59
AMACR-201ENST00000335606 PELP1Q8IZL8 1130 aaKnown RBP18.64■□□□□ 0.58
AMACR-201ENST00000335606 MROH2BQ7Z745 1585 aa18.64■□□□□ 0.57
AMACR-201ENST00000335606 ZNF316A6NFI3 1004 aaPredicted RBP18.6■□□□□ 0.57
AMACR-201ENST00000335606 SOGA1O94964 1423 aa18.56■□□□□ 0.56
AMACR-201ENST00000335606 FBLN2P98095 1184 aa18.52■□□□□ 0.56
AMACR-201ENST00000335606 BCANQ96GW7 911 aa18.52■□□□□ 0.56
AMACR-201ENST00000335606 CEP162Q5TB80 1403 aa18.5■□□□□ 0.55
AMACR-201ENST00000335606 ABCC8Q09428 1581 aa18.5■□□□□ 0.55
AMACR-201ENST00000335606 TRIM52Q96A61 297 aa18.49■□□□□ 0.55
AMACR-201ENST00000335606 HIRIP3Q9BW71 556 aaPredicted RBP18.48■□□□□ 0.55
AMACR-201ENST00000335606 ACIN1Q9UKV3 1341 aaKnown RBP18.47■□□□□ 0.55
AMACR-201ENST00000335606 SCAF1Q9H7N4 1312 aaKnown RBP18.46■□□□□ 0.55
AMACR-201ENST00000335606 NACADO15069 1562 aa18.45■□□□□ 0.54
AMACR-201ENST00000335606 CCDC88BA6NC98 1476 aa18.43■□□□□ 0.54
AMACR-201ENST00000335606 NEFLP07196 543 aa18.42■□□□□ 0.54
AMACR-201ENST00000335606 WIZO95785 1651 aa18.42■□□□□ 0.54
AMACR-201ENST00000335606 CLIP1P30622 1438 aa18.4■□□□□ 0.54
AMACR-201ENST00000335606 WRNQ14191 1432 aaPredicted RBP eCLIP18.39■□□□□ 0.54
AMACR-201ENST00000335606 MIER1Q8N108 512 aa18.39■□□□□ 0.54
AMACR-201ENST00000335606 ZNF326Q5BKZ1 582 aaKnown RBP18.39■□□□□ 0.53
AMACR-201ENST00000335606 MYT1LQ9UL68 1186 aa18.35■□□□□ 0.53
AMACR-201ENST00000335606 CHIC2Q9UKJ5 165 aa18.32■□□□□ 0.52
AMACR-201ENST00000335606 BAZ1AQ9NRL2 1556 aaPredicted RBP18.3■□□□□ 0.52
AMACR-201ENST00000335606 DDX10Q13206 875 aaKnown RBP18.28■□□□□ 0.52
AMACR-201ENST00000335606 RUSC2Q8N2Y8 1516 aa18.28■□□□□ 0.52
AMACR-201ENST00000335606 ZNF777Q9ULD5 760 aaPredicted RBP18.26■□□□□ 0.51
AMACR-201ENST00000335606 BAZ1BQ9UIG0 1483 aaKnown RBP18.25■□□□□ 0.51
AMACR-201ENST00000335606 TNIKQ9UKE5 1360 aa18.23■□□□□ 0.51
AMACR-201ENST00000335606 GOLGA3Q08378 1498 aa18.21■□□□□ 0.51
AMACR-201ENST00000335606 KANK4Q5T7N3 995 aaPredicted RBP18.19■□□□□ 0.5
AMACR-201ENST00000335606 ERICH6Q7L0X2 663 aa18.17■□□□□ 0.5
AMACR-201ENST00000335606 SENP3-EIF4A1A0A087X0R7 540 aa18.16■□□□□ 0.5
AMACR-201ENST00000335606 SIN3AQ96ST3 1273 aa18.13■□□□□ 0.49
AMACR-201ENST00000335606 ANP32CO43423 234 aa18.1■□□□□ 0.49
AMACR-201ENST00000335606 RRP7BPQ9NSQ0 103 aa18.09■□□□□ 0.49
AMACR-201ENST00000335606 CEP164Q9UPV0 1460 aa18.04■□□□□ 0.48
AMACR-201ENST00000335606 EEA1Q15075 1411 aa18.03■□□□□ 0.48
AMACR-201ENST00000335606 SLC4A1APQ9BWU0 796 aaKnown RBP17.99■□□□□ 0.47
AMACR-201ENST00000335606 FKBP8Q14318 412 aa17.98■□□□□ 0.47
AMACR-201ENST00000335606 MTUS2Q5JR59 1369 aa17.97■□□□□ 0.47
AMACR-201ENST00000335606 TONSLQ96HA7 1378 aa17.97■□□□□ 0.47
AMACR-201ENST00000335606 IRX6P78412 446 aaPredicted RBP17.97■□□□□ 0.47
AMACR-201ENST00000335606 KIF27Q86VH2 1401 aa17.97■□□□□ 0.47
AMACR-201ENST00000335606 RAPGEF2Q9Y4G8 1499 aa17.95■□□□□ 0.46
AMACR-201ENST00000335606 FAM9BQ8IZU0 186 aa17.93■□□□□ 0.46
AMACR-201ENST00000335606 SALL2Q9Y467 1007 aaPredicted RBP17.93■□□□□ 0.46
AMACR-201ENST00000335606 TOP2AP11388 1531 aaKnown RBP17.92■□□□□ 0.46
AMACR-201ENST00000335606 CUX2O14529 1486 aa17.92■□□□□ 0.46
AMACR-201ENST00000335606 HNRNPUQ00839 825 aaKnown RBP eCLIP17.91■□□□□ 0.46
AMACR-201ENST00000335606 KDM2AQ9Y2K7 1162 aa17.88■□□□□ 0.45
AMACR-201ENST00000335606 SMARCA4P51532 1647 aa17.88■□□□□ 0.45
AMACR-201ENST00000335606 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
AMACR-201ENST00000335606 VPS8Q8N3P4 1428 aa17.86■□□□□ 0.45
AMACR-201ENST00000335606 CARMIL1Q5VZK9 1371 aa17.85■□□□□ 0.45
AMACR-201ENST00000335606 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.85■□□□□ 0.45
AMACR-201ENST00000335606 ATAD2BQ9ULI0 1458 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms