RNA–Protein interactions for RNA: ENST00000523627.1

AC055854.1-201, humanhuman

TSL 4 BASIC

Gene AC055854.1, Length 570 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-201ENST00000523627 NISCHQ9Y2I1 1504 aa40.61■■■■■ 4.09
AC055854.1-201ENST00000523627 ABCC9O60706 1549 aa36.82■■■■□ 3.48
AC055854.1-201ENST00000523627 CCDC180Q9P1Z9 1646 aa36.52■■■■□ 3.44
AC055854.1-201ENST00000523627 DNAJC5BQ9UF47 199 aa34.92■■■■□ 3.18
AC055854.1-201ENST00000523627 RB1CC1Q8TDY2 1594 aa34.87■■■■□ 3.17
AC055854.1-201ENST00000523627 NACADO15069 1562 aa34.58■■■■□ 3.13
AC055854.1-201ENST00000523627 DCAF8L2P0C7V8 631 aa34.23■■■■□ 3.07
AC055854.1-201ENST00000523627 PABPN1Q86U42 306 aaKnown RBP eCLIP34.23■■■■□ 3.07
AC055854.1-201ENST00000523627 UNC13AQ9UPW8 1703 aa34.18■■■■□ 3.06
AC055854.1-201ENST00000523627 MYO15BQ96JP2 1530 aa34.05■■■■□ 3.04
AC055854.1-201ENST00000523627 BICRAQ9NZM4 1560 aa34.02■■■■□ 3.04
AC055854.1-201ENST00000523627 ZCCHC6Q5VYS8 1495 aaKnown RBP33.61■■■□□ 2.97
AC055854.1-201ENST00000523627 DCAF1Q9Y4B6 1507 aa33.52■■■□□ 2.96
AC055854.1-201ENST00000523627 SHROOM4Q9ULL8 1493 aa33.38■■■□□ 2.93
AC055854.1-201ENST00000523627 SCRIBQ14160 1630 aa33.27■■■□□ 2.92
AC055854.1-201ENST00000523627 CC2D2AQ9P2K1 1620 aa33.26■■■□□ 2.91
AC055854.1-201ENST00000523627 CECR2Q9BXF3 1484 aa33.18■■■□□ 2.9
AC055854.1-201ENST00000523627 EIF4G1Q04637 1599 aaKnown RBP33.13■■■□□ 2.89
AC055854.1-201ENST00000523627 DNAJC5Q9H3Z4 198 aa32.16■■■□□ 2.74
AC055854.1-201ENST00000523627 NCAPD3P42695 1498 aa31.98■■■□□ 2.71
AC055854.1-201ENST00000523627 ATAD2BQ9ULI0 1458 aa31.84■■■□□ 2.69
AC055854.1-201ENST00000523627 CUX2O14529 1486 aa31.81■■■□□ 2.68
AC055854.1-201ENST00000523627 SMARCA4P51532 1647 aa31.73■■■□□ 2.67
AC055854.1-201ENST00000523627 ERCC6Q03468 1493 aa31.71■■■□□ 2.67
AC055854.1-201ENST00000523627 HMGXB3Q12766 1538 aa31.69■■■□□ 2.66
AC055854.1-201ENST00000523627 SMARCA2P51531 1590 aa31.66■■■□□ 2.66
AC055854.1-201ENST00000523627 NESP48681 1621 aa31.6■■■□□ 2.65
AC055854.1-201ENST00000523627 BAZ1AQ9NRL2 1556 aaPredicted RBP31.48■■■□□ 2.63
AC055854.1-201ENST00000523627 PEG3Q9GZU2 1588 aa31.46■■■□□ 2.63
AC055854.1-201ENST00000523627 BAZ1BQ9UIG0 1483 aaKnown RBP31.45■■■□□ 2.62
AC055854.1-201ENST00000523627 THOC2Q8NI27 1593 aaKnown RBP31.34■■■□□ 2.61
AC055854.1-201ENST00000523627 MROH2BQ7Z745 1585 aa31.32■■■□□ 2.6
AC055854.1-201ENST00000523627 LAMC3Q9Y6N6 1575 aa31.26■■■□□ 2.59
AC055854.1-201ENST00000523627 KIF21AQ7Z4S6 1674 aa31.14■■■□□ 2.58
AC055854.1-201ENST00000523627 PDS5BQ9NTI5 1447 aa31.04■■■□□ 2.56
AC055854.1-201ENST00000523627 CADPSQ9ULU8 1353 aa30.95■■■□□ 2.55
AC055854.1-201ENST00000523627 WIZO95785 1651 aa30.9■■■□□ 2.54
AC055854.1-201ENST00000523627 MRC2Q9UBG0 1479 aa30.84■■■□□ 2.53
AC055854.1-201ENST00000523627 WDR62O43379 1518 aa30.82■■■□□ 2.52
AC055854.1-201ENST00000523627 CEP164Q9UPV0 1460 aa30.63■■■□□ 2.49
AC055854.1-201ENST00000523627 FANCD2Q9BXW9 1451 aa30.6■■■□□ 2.49
AC055854.1-201ENST00000523627 CFTRP13569 1480 aa30.58■■■□□ 2.49
AC055854.1-201ENST00000523627 RSF1Q96T23 1441 aaPredicted RBP30.55■■■□□ 2.48
AC055854.1-201ENST00000523627 TRIM41Q8WV44 630 aa30.54■■■□□ 2.48
AC055854.1-201ENST00000523627 TOP2AP11388 1531 aaKnown RBP30.47■■■□□ 2.47
AC055854.1-201ENST00000523627 URB2Q14146 1524 aaKnown RBP30.43■■■□□ 2.46
AC055854.1-201ENST00000523627 OSCARQ8IYS5 282 aa30.26■■■□□ 2.43
AC055854.1-201ENST00000523627 PRDM2Q13029 1718 aa30.19■■■□□ 2.42
AC055854.1-201ENST00000523627 CCDC88BA6NC98 1476 aa30.15■■■□□ 2.42
AC055854.1-201ENST00000523627 ZNF608Q9ULD9 1512 aaPredicted RBP30.12■■■□□ 2.41
AC055854.1-201ENST00000523627 IFT140Q96RY7 1462 aa30.04■■■□□ 2.4
AC055854.1-201ENST00000523627 TOPBP1Q92547 1522 aa30.01■■■□□ 2.4
AC055854.1-201ENST00000523627 RIMBP3CA6NJZ7 1639 aa30■■■□□ 2.39
AC055854.1-201ENST00000523627 RIMBP3BA6NNM3 1639 aa30■■■□□ 2.39
AC055854.1-201ENST00000523627 RIMBP3Q9UFD9 1639 aa30■■■□□ 2.39
AC055854.1-201ENST00000523627 EIF4G3O43432 1585 aaKnown RBP29.89■■■□□ 2.38
AC055854.1-201ENST00000523627 ARHGEF11O15085 1522 aa29.86■■■□□ 2.37
AC055854.1-201ENST00000523627 DNMBPQ6XZF7 1577 aa29.86■■■□□ 2.37
AC055854.1-201ENST00000523627 ABCC8Q09428 1581 aa29.83■■■□□ 2.37
AC055854.1-201ENST00000523627 TARBP1Q13395 1621 aaKnown RBP29.82■■■□□ 2.36
AC055854.1-201ENST00000523627 AQRO60306 1485 aaKnown RBP eCLIP29.76■■■□□ 2.35
AC055854.1-201ENST00000523627 CHD1O14646 1710 aa29.71■■■□□ 2.35
AC055854.1-201ENST00000523627 POLA1P09884 1462 aaPredicted RBP29.7■■■□□ 2.35
AC055854.1-201ENST00000523627 RAD54L2Q9Y4B4 1467 aa29.61■■■□□ 2.33
AC055854.1-201ENST00000523627 CYB5RLQ6IPT4 315 aa29.6■■■□□ 2.33
AC055854.1-201ENST00000523627 ARAP1Q96P48 1450 aa29.59■■■□□ 2.33
AC055854.1-201ENST00000523627 TDRD9Q8NDG6 1382 aaKnown RBP29.52■■■□□ 2.32
AC055854.1-201ENST00000523627 SOGA1O94964 1423 aa29.51■■■□□ 2.31
AC055854.1-201ENST00000523627 FBLN2P98095 1184 aa29.49■■■□□ 2.31
AC055854.1-201ENST00000523627 FGD5Q6ZNL6 1462 aa29.46■■■□□ 2.31
AC055854.1-201ENST00000523627 SNAPC4Q5SXM2 1469 aa29.43■■■□□ 2.3
AC055854.1-201ENST00000523627 CUX1P39880 1505 aa29.43■■■□□ 2.3
AC055854.1-201ENST00000523627 CLASP1Q7Z460 1538 aa29.41■■■□□ 2.3
AC055854.1-201ENST00000523627 WDR97A6NE52 1622 aa29.39■■■□□ 2.3
AC055854.1-201ENST00000523627 MAGI1Q96QZ7 1491 aaPredicted RBP29.31■■■□□ 2.28
AC055854.1-201ENST00000523627 GRIN2BQ13224 1484 aa29.29■■■□□ 2.28
AC055854.1-201ENST00000523627 TRHP20396 242 aaPredicted RBP29.28■■■□□ 2.28
AC055854.1-201ENST00000523627 SYNJ1O43426 1573 aa29.26■■■□□ 2.27
AC055854.1-201ENST00000523627 CHMP7Q8WUX9 453 aaPredicted RBP29.24■■■□□ 2.27
AC055854.1-201ENST00000523627 SYNJ2O15056 1496 aa29.23■■■□□ 2.27
AC055854.1-201ENST00000523627 PBRM1Q86U86 1689 aa29.16■■■□□ 2.26
AC055854.1-201ENST00000523627 GAPVD1Q14C86 1478 aa29.15■■■□□ 2.26
AC055854.1-201ENST00000523627 ABCA5Q8WWZ7 1642 aa29.12■■■□□ 2.25
AC055854.1-201ENST00000523627 ABCA10Q8WWZ4 1543 aa29.11■■■□□ 2.25
AC055854.1-201ENST00000523627 ERCC6L2Q5T890 1561 aa28.98■■■□□ 2.23
AC055854.1-201ENST00000523627 GRIN2AQ12879 1464 aa28.94■■■□□ 2.22
AC055854.1-201ENST00000523627 ADAMTS12P58397 1594 aa28.9■■■□□ 2.22
AC055854.1-201ENST00000523627 CEP170Q5SW79 1584 aa28.9■■■□□ 2.22
AC055854.1-201ENST00000523627 NUP160Q12769 1436 aa28.88■■■□□ 2.21
AC055854.1-201ENST00000523627 WRNQ14191 1432 aaPredicted RBP eCLIP28.87■■■□□ 2.21
AC055854.1-201ENST00000523627 BIVM-ERCC5R4GMW8 1640 aa28.85■■■□□ 2.21
AC055854.1-201ENST00000523627 SUPT5HO00267 1087 aaKnown RBP28.85■■■□□ 2.21
AC055854.1-201ENST00000523627 TOP2BQ02880 1626 aa28.84■■■□□ 2.21
AC055854.1-201ENST00000523627 SHROOM2Q13796 1616 aa28.8■■■□□ 2.2
AC055854.1-201ENST00000523627 FHAD1B1AJZ9 1412 aa28.77■■■□□ 2.2
AC055854.1-201ENST00000523627 ERICH3Q5RHP9 1530 aa28.71■■■□□ 2.19
AC055854.1-201ENST00000523627 PRG4Q92954 1404 aaPredicted RBP28.57■■■□□ 2.16
AC055854.1-201ENST00000523627 AEBP2Q6ZN18 517 aaPredicted RBP28.56■■■□□ 2.16
AC055854.1-201ENST00000523627 KIF13AQ9H1H9 1805 aa28.55■■■□□ 2.16
AC055854.1-201ENST00000523627 JPH4Q96JJ6 628 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms