RNA–Protein interactions for RNA: ENST00000620630.1

VCX-203, Transcript of variable charge X-linked, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX, Length 812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX-203ENST00000620630 NISCHQ9Y2I1 1504 aa39.48■■■■□ 3.91
VCX-203ENST00000620630 ABCC9O60706 1549 aa35.67■■■■□ 3.3
VCX-203ENST00000620630 CCDC180Q9P1Z9 1646 aa35.53■■■■□ 3.28
VCX-203ENST00000620630 RB1CC1Q8TDY2 1594 aa33.87■■■■□ 3.01
VCX-203ENST00000620630 NACADO15069 1562 aa33.59■■■□□ 2.97
VCX-203ENST00000620630 DNAJC5BQ9UF47 199 aa33.55■■■□□ 2.96
VCX-203ENST00000620630 DCAF8L2P0C7V8 631 aa33.39■■■□□ 2.94
VCX-203ENST00000620630 UNC13AQ9UPW8 1703 aa33.17■■■□□ 2.9
VCX-203ENST00000620630 PABPN1Q86U42 306 aaKnown RBP eCLIP33.16■■■□□ 2.9
VCX-203ENST00000620630 MYO15BQ96JP2 1530 aa33.05■■■□□ 2.88
VCX-203ENST00000620630 BICRAQ9NZM4 1560 aa32.9■■■□□ 2.86
VCX-203ENST00000620630 ZCCHC6Q5VYS8 1495 aaKnown RBP32.69■■■□□ 2.82
VCX-203ENST00000620630 DCAF1Q9Y4B6 1507 aa32.58■■■□□ 2.81
VCX-203ENST00000620630 SHROOM4Q9ULL8 1493 aa32.4■■■□□ 2.78
VCX-203ENST00000620630 SCRIBQ14160 1630 aa32.38■■■□□ 2.77
VCX-203ENST00000620630 CC2D2AQ9P2K1 1620 aa32.21■■■□□ 2.75
VCX-203ENST00000620630 CECR2Q9BXF3 1484 aa32.12■■■□□ 2.73
VCX-203ENST00000620630 EIF4G1Q04637 1599 aaKnown RBP32.1■■■□□ 2.73
VCX-203ENST00000620630 NCAPD3P42695 1498 aa30.99■■■□□ 2.55
VCX-203ENST00000620630 DNAJC5Q9H3Z4 198 aa30.9■■■□□ 2.54
VCX-203ENST00000620630 ATAD2BQ9ULI0 1458 aa30.89■■■□□ 2.54
VCX-203ENST00000620630 SMARCA4P51532 1647 aa30.86■■■□□ 2.53
VCX-203ENST00000620630 SMARCA2P51531 1590 aa30.81■■■□□ 2.52
VCX-203ENST00000620630 ERCC6Q03468 1493 aa30.8■■■□□ 2.52
VCX-203ENST00000620630 HMGXB3Q12766 1538 aa30.78■■■□□ 2.52
VCX-203ENST00000620630 CUX2O14529 1486 aa30.76■■■□□ 2.52
VCX-203ENST00000620630 BAZ1AQ9NRL2 1556 aaPredicted RBP30.66■■■□□ 2.5
VCX-203ENST00000620630 BAZ1BQ9UIG0 1483 aaKnown RBP30.61■■■□□ 2.49
VCX-203ENST00000620630 NESP48681 1621 aa30.6■■■□□ 2.49
VCX-203ENST00000620630 PEG3Q9GZU2 1588 aa30.53■■■□□ 2.48
VCX-203ENST00000620630 MROH2BQ7Z745 1585 aa30.44■■■□□ 2.46
VCX-203ENST00000620630 LAMC3Q9Y6N6 1575 aa30.35■■■□□ 2.45
VCX-203ENST00000620630 THOC2Q8NI27 1593 aaKnown RBP30.32■■■□□ 2.45
VCX-203ENST00000620630 KIF21AQ7Z4S6 1674 aa30.23■■■□□ 2.43
VCX-203ENST00000620630 PDS5BQ9NTI5 1447 aa30.14■■■□□ 2.42
VCX-203ENST00000620630 WIZO95785 1651 aa30.08■■■□□ 2.41
VCX-203ENST00000620630 CADPSQ9ULU8 1353 aa30.04■■■□□ 2.4
VCX-203ENST00000620630 MRC2Q9UBG0 1479 aa29.93■■■□□ 2.38
VCX-203ENST00000620630 WDR62O43379 1518 aa29.86■■■□□ 2.37
VCX-203ENST00000620630 CEP164Q9UPV0 1460 aa29.78■■■□□ 2.36
VCX-203ENST00000620630 FANCD2Q9BXW9 1451 aa29.73■■■□□ 2.35
VCX-203ENST00000620630 RSF1Q96T23 1441 aaPredicted RBP29.72■■■□□ 2.35
VCX-203ENST00000620630 CFTRP13569 1480 aa29.68■■■□□ 2.34
VCX-203ENST00000620630 TOP2AP11388 1531 aaKnown RBP29.67■■■□□ 2.34
VCX-203ENST00000620630 TRIM41Q8WV44 630 aa29.53■■■□□ 2.32
VCX-203ENST00000620630 URB2Q14146 1524 aaKnown RBP29.5■■■□□ 2.31
VCX-203ENST00000620630 PRDM2Q13029 1718 aa29.45■■■□□ 2.31
VCX-203ENST00000620630 CCDC88BA6NC98 1476 aa29.32■■■□□ 2.28
VCX-203ENST00000620630 OSCARQ8IYS5 282 aa29.32■■■□□ 2.28
VCX-203ENST00000620630 IFT140Q96RY7 1462 aa29.17■■■□□ 2.26
VCX-203ENST00000620630 TOPBP1Q92547 1522 aa29.16■■■□□ 2.26
VCX-203ENST00000620630 ZNF608Q9ULD9 1512 aaPredicted RBP29.16■■■□□ 2.26
VCX-203ENST00000620630 ABCC8Q09428 1581 aa29.05■■■□□ 2.24
VCX-203ENST00000620630 DNMBPQ6XZF7 1577 aa29.05■■■□□ 2.24
VCX-203ENST00000620630 EIF4G3O43432 1585 aaKnown RBP29.02■■■□□ 2.24
VCX-203ENST00000620630 RIMBP3CA6NJZ7 1639 aa29.02■■■□□ 2.24
VCX-203ENST00000620630 RIMBP3BA6NNM3 1639 aa29.02■■■□□ 2.24
VCX-203ENST00000620630 RIMBP3Q9UFD9 1639 aa29.02■■■□□ 2.24
VCX-203ENST00000620630 TARBP1Q13395 1621 aaKnown RBP28.92■■■□□ 2.22
VCX-203ENST00000620630 ARHGEF11O15085 1522 aa28.89■■■□□ 2.22
VCX-203ENST00000620630 CHD1O14646 1710 aa28.86■■■□□ 2.21
VCX-203ENST00000620630 AQRO60306 1485 aaKnown RBP eCLIP28.86■■■□□ 2.21
VCX-203ENST00000620630 POLA1P09884 1462 aaPredicted RBP28.85■■■□□ 2.21
VCX-203ENST00000620630 RAD54L2Q9Y4B4 1467 aa28.75■■■□□ 2.19
VCX-203ENST00000620630 FBLN2P98095 1184 aa28.71■■■□□ 2.19
VCX-203ENST00000620630 SOGA1O94964 1423 aa28.69■■■□□ 2.18
VCX-203ENST00000620630 TDRD9Q8NDG6 1382 aaKnown RBP28.67■■■□□ 2.18
VCX-203ENST00000620630 CYB5RLQ6IPT4 315 aa28.66■■■□□ 2.18
VCX-203ENST00000620630 FGD5Q6ZNL6 1462 aa28.66■■■□□ 2.18
VCX-203ENST00000620630 CUX1P39880 1505 aa28.61■■■□□ 2.17
VCX-203ENST00000620630 ARAP1Q96P48 1450 aa28.6■■■□□ 2.17
VCX-203ENST00000620630 WDR97A6NE52 1622 aa28.59■■■□□ 2.17
VCX-203ENST00000620630 SNAPC4Q5SXM2 1469 aa28.59■■■□□ 2.17
VCX-203ENST00000620630 MAGI1Q96QZ7 1491 aaPredicted RBP28.49■■■□□ 2.15
VCX-203ENST00000620630 CLASP1Q7Z460 1538 aa28.48■■■□□ 2.15
VCX-203ENST00000620630 GRIN2BQ13224 1484 aa28.47■■■□□ 2.15
VCX-203ENST00000620630 CHMP7Q8WUX9 453 aaPredicted RBP28.46■■■□□ 2.15
VCX-203ENST00000620630 SYNJ1O43426 1573 aa28.45■■■□□ 2.14
VCX-203ENST00000620630 PBRM1Q86U86 1689 aa28.41■■■□□ 2.14
VCX-203ENST00000620630 TRHP20396 242 aaPredicted RBP28.4■■■□□ 2.14
VCX-203ENST00000620630 SYNJ2O15056 1496 aa28.4■■■□□ 2.14
VCX-203ENST00000620630 GAPVD1Q14C86 1478 aa28.35■■■□□ 2.13
VCX-203ENST00000620630 SUPT5HO00267 1087 aaKnown RBP28.32■■■□□ 2.12
VCX-203ENST00000620630 ABCA5Q8WWZ7 1642 aa28.3■■■□□ 2.12
VCX-203ENST00000620630 ABCA10Q8WWZ4 1543 aa28.3■■■□□ 2.12
VCX-203ENST00000620630 WRNQ14191 1432 aaPredicted RBP eCLIP28.15■■■□□ 2.1
VCX-203ENST00000620630 BIVM-ERCC5R4GMW8 1640 aa28.12■■■□□ 2.09
VCX-203ENST00000620630 GRIN2AQ12879 1464 aa28.11■■■□□ 2.09
VCX-203ENST00000620630 ADAMTS12P58397 1594 aa28.11■■■□□ 2.09
VCX-203ENST00000620630 TOP2BQ02880 1626 aa28.1■■■□□ 2.09
VCX-203ENST00000620630 ERCC6L2Q5T890 1561 aa28.04■■■□□ 2.08
VCX-203ENST00000620630 CEP170Q5SW79 1584 aa28.03■■■□□ 2.08
VCX-203ENST00000620630 NUP160Q12769 1436 aa28.01■■■□□ 2.08
VCX-203ENST00000620630 FHAD1B1AJZ9 1412 aa27.98■■■□□ 2.07
VCX-203ENST00000620630 ERICH3Q5RHP9 1530 aa27.94■■■□□ 2.06
VCX-203ENST00000620630 SHROOM2Q13796 1616 aa27.93■■■□□ 2.06
VCX-203ENST00000620630 PRG4Q92954 1404 aaPredicted RBP27.76■■■□□ 2.04
VCX-203ENST00000620630 RUSC2Q8N2Y8 1516 aa27.72■■■□□ 2.03
VCX-203ENST00000620630 JPH4Q96JJ6 628 aa27.7■■■□□ 2.02
VCX-203ENST00000620630 KIF13AQ9H1H9 1805 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms