RNA–Protein interactions for RNA: ENST00000602735.2

IFITM3-204, Transcript of interferon induced transmembrane protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene IFITM3, Length 713 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM3-204ENST00000602735 NISCHQ9Y2I1 1504 aa36.01■■■■□ 3.36
IFITM3-204ENST00000602735 ABCC9O60706 1549 aa32.75■■■□□ 2.83
IFITM3-204ENST00000602735 CCDC180Q9P1Z9 1646 aa32.33■■■□□ 2.77
IFITM3-204ENST00000602735 RB1CC1Q8TDY2 1594 aa31■■■□□ 2.55
IFITM3-204ENST00000602735 DCAF8L2P0C7V8 631 aa30.91■■■□□ 2.54
IFITM3-204ENST00000602735 DNAJC5BQ9UF47 199 aa30.9■■■□□ 2.54
IFITM3-204ENST00000602735 NACADO15069 1562 aa30.7■■■□□ 2.5
IFITM3-204ENST00000602735 PABPN1Q86U42 306 aaKnown RBP eCLIP30.56■■■□□ 2.48
IFITM3-204ENST00000602735 UNC13AQ9UPW8 1703 aa30.17■■■□□ 2.42
IFITM3-204ENST00000602735 MYO15BQ96JP2 1530 aa30.11■■■□□ 2.41
IFITM3-204ENST00000602735 BICRAQ9NZM4 1560 aa29.99■■■□□ 2.39
IFITM3-204ENST00000602735 ZCCHC6Q5VYS8 1495 aaKnown RBP29.74■■■□□ 2.35
IFITM3-204ENST00000602735 DCAF1Q9Y4B6 1507 aa29.66■■■□□ 2.34
IFITM3-204ENST00000602735 SCRIBQ14160 1630 aa29.57■■■□□ 2.32
IFITM3-204ENST00000602735 SHROOM4Q9ULL8 1493 aa29.57■■■□□ 2.32
IFITM3-204ENST00000602735 CECR2Q9BXF3 1484 aa29.5■■■□□ 2.31
IFITM3-204ENST00000602735 CC2D2AQ9P2K1 1620 aa29.49■■■□□ 2.31
IFITM3-204ENST00000602735 EIF4G1Q04637 1599 aaKnown RBP29.35■■■□□ 2.29
IFITM3-204ENST00000602735 DNAJC5Q9H3Z4 198 aa28.6■■■□□ 2.17
IFITM3-204ENST00000602735 ERCC6Q03468 1493 aa28.36■■■□□ 2.13
IFITM3-204ENST00000602735 NCAPD3P42695 1498 aa28.34■■■□□ 2.13
IFITM3-204ENST00000602735 CUX2O14529 1486 aa28.24■■■□□ 2.11
IFITM3-204ENST00000602735 ATAD2BQ9ULI0 1458 aa28.24■■■□□ 2.11
IFITM3-204ENST00000602735 SMARCA2P51531 1590 aa28.16■■■□□ 2.1
IFITM3-204ENST00000602735 SMARCA4P51532 1647 aa28.12■■■□□ 2.09
IFITM3-204ENST00000602735 HMGXB3Q12766 1538 aa28.07■■■□□ 2.08
IFITM3-204ENST00000602735 BAZ1BQ9UIG0 1483 aaKnown RBP28.02■■■□□ 2.08
IFITM3-204ENST00000602735 NESP48681 1621 aa28.01■■■□□ 2.07
IFITM3-204ENST00000602735 BAZ1AQ9NRL2 1556 aaPredicted RBP27.99■■■□□ 2.07
IFITM3-204ENST00000602735 PEG3Q9GZU2 1588 aa27.77■■■□□ 2.04
IFITM3-204ENST00000602735 MROH2BQ7Z745 1585 aa27.75■■■□□ 2.03
IFITM3-204ENST00000602735 LAMC3Q9Y6N6 1575 aa27.74■■■□□ 2.03
IFITM3-204ENST00000602735 PDS5BQ9NTI5 1447 aa27.71■■■□□ 2.03
IFITM3-204ENST00000602735 THOC2Q8NI27 1593 aaKnown RBP27.65■■■□□ 2.02
IFITM3-204ENST00000602735 KIF21AQ7Z4S6 1674 aa27.59■■■□□ 2.01
IFITM3-204ENST00000602735 CADPSQ9ULU8 1353 aa27.55■■■□□ 2
IFITM3-204ENST00000602735 TRIM41Q8WV44 630 aa27.42■■□□□ 1.98
IFITM3-204ENST00000602735 WIZO95785 1651 aa27.42■■□□□ 1.98
IFITM3-204ENST00000602735 MRC2Q9UBG0 1479 aa27.4■■□□□ 1.98
IFITM3-204ENST00000602735 CEP164Q9UPV0 1460 aa27.28■■□□□ 1.96
IFITM3-204ENST00000602735 WDR62O43379 1518 aa27.26■■□□□ 1.96
IFITM3-204ENST00000602735 FANCD2Q9BXW9 1451 aa27.23■■□□□ 1.95
IFITM3-204ENST00000602735 RSF1Q96T23 1441 aaPredicted RBP27.12■■□□□ 1.93
IFITM3-204ENST00000602735 CFTRP13569 1480 aa27.12■■□□□ 1.93
IFITM3-204ENST00000602735 OSCARQ8IYS5 282 aa27.11■■□□□ 1.93
IFITM3-204ENST00000602735 TOP2AP11388 1531 aaKnown RBP27.03■■□□□ 1.92
IFITM3-204ENST00000602735 URB2Q14146 1524 aaKnown RBP26.95■■□□□ 1.91
IFITM3-204ENST00000602735 CCDC88BA6NC98 1476 aa26.79■■□□□ 1.88
IFITM3-204ENST00000602735 PRDM2Q13029 1718 aa26.74■■□□□ 1.87
IFITM3-204ENST00000602735 IFT140Q96RY7 1462 aa26.74■■□□□ 1.87
IFITM3-204ENST00000602735 ZNF608Q9ULD9 1512 aaPredicted RBP26.69■■□□□ 1.86
IFITM3-204ENST00000602735 TOPBP1Q92547 1522 aa26.65■■□□□ 1.86
IFITM3-204ENST00000602735 ABCC8Q09428 1581 aa26.63■■□□□ 1.85
IFITM3-204ENST00000602735 RIMBP3CA6NJZ7 1639 aa26.59■■□□□ 1.85
IFITM3-204ENST00000602735 RIMBP3BA6NNM3 1639 aa26.59■■□□□ 1.85
IFITM3-204ENST00000602735 RIMBP3Q9UFD9 1639 aa26.59■■□□□ 1.85
IFITM3-204ENST00000602735 FBLN2P98095 1184 aa26.58■■□□□ 1.85
IFITM3-204ENST00000602735 CYB5RLQ6IPT4 315 aa26.53■■□□□ 1.84
IFITM3-204ENST00000602735 DNMBPQ6XZF7 1577 aa26.51■■□□□ 1.83
IFITM3-204ENST00000602735 ARHGEF11O15085 1522 aa26.49■■□□□ 1.83
IFITM3-204ENST00000602735 AQRO60306 1485 aaKnown RBP eCLIP26.49■■□□□ 1.831e-6■■■■■ 29.8
IFITM3-204ENST00000602735 EIF4G3O43432 1585 aaKnown RBP26.48■■□□□ 1.83
IFITM3-204ENST00000602735 TRHP20396 242 aaPredicted RBP26.4■■□□□ 1.82
IFITM3-204ENST00000602735 POLA1P09884 1462 aaPredicted RBP26.36■■□□□ 1.81
IFITM3-204ENST00000602735 TARBP1Q13395 1621 aaKnown RBP26.36■■□□□ 1.81
IFITM3-204ENST00000602735 CHD1O14646 1710 aa26.34■■□□□ 1.81
IFITM3-204ENST00000602735 SOGA1O94964 1423 aa26.34■■□□□ 1.81
IFITM3-204ENST00000602735 TDRD9Q8NDG6 1382 aaKnown RBP26.33■■□□□ 1.81
IFITM3-204ENST00000602735 RAD54L2Q9Y4B4 1467 aa26.32■■□□□ 1.8
IFITM3-204ENST00000602735 CHMP7Q8WUX9 453 aaPredicted RBP26.29■■□□□ 1.8
IFITM3-204ENST00000602735 ARAP1Q96P48 1450 aa26.19■■□□□ 1.78
IFITM3-204ENST00000602735 FGD5Q6ZNL6 1462 aa26.18■■□□□ 1.78
IFITM3-204ENST00000602735 SNAPC4Q5SXM2 1469 aa26.17■■□□□ 1.78
IFITM3-204ENST00000602735 GRIN2BQ13224 1484 aa26.09■■□□□ 1.77
IFITM3-204ENST00000602735 CUX1P39880 1505 aa26.08■■□□□ 1.77
IFITM3-204ENST00000602735 MAGI1Q96QZ7 1491 aaPredicted RBP26.07■■□□□ 1.76
IFITM3-204ENST00000602735 SYNJ1O43426 1573 aa26.07■■□□□ 1.76
IFITM3-204ENST00000602735 WDR97A6NE52 1622 aa26.06■■□□□ 1.76
IFITM3-204ENST00000602735 SUPT5HO00267 1087 aaKnown RBP26.04■■□□□ 1.76
IFITM3-204ENST00000602735 SYNJ2O15056 1496 aa26■■□□□ 1.75
IFITM3-204ENST00000602735 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
IFITM3-204ENST00000602735 GAPVD1Q14C86 1478 aa25.98■■□□□ 1.75
IFITM3-204ENST00000602735 PBRM1Q86U86 1689 aa25.88■■□□□ 1.73
IFITM3-204ENST00000602735 AEBP2Q6ZN18 517 aaPredicted RBP25.85■■□□□ 1.73
IFITM3-204ENST00000602735 ABCA10Q8WWZ4 1543 aa25.83■■□□□ 1.73
IFITM3-204ENST00000602735 WRNQ14191 1432 aaPredicted RBP eCLIP25.8■■□□□ 1.72
IFITM3-204ENST00000602735 ABCA5Q8WWZ7 1642 aa25.75■■□□□ 1.71
IFITM3-204ENST00000602735 GRIN2AQ12879 1464 aa25.72■■□□□ 1.71
IFITM3-204ENST00000602735 FHAD1B1AJZ9 1412 aa25.63■■□□□ 1.69
IFITM3-204ENST00000602735 ERCC6L2Q5T890 1561 aa25.61■■□□□ 1.69
IFITM3-204ENST00000602735 ADAMTS12P58397 1594 aa25.6■■□□□ 1.69
IFITM3-204ENST00000602735 TOP2BQ02880 1626 aa25.59■■□□□ 1.69
IFITM3-204ENST00000602735 NUP160Q12769 1436 aa25.59■■□□□ 1.69
IFITM3-204ENST00000602735 CEP170Q5SW79 1584 aa25.58■■□□□ 1.69
IFITM3-204ENST00000602735 BIVM-ERCC5R4GMW8 1640 aa25.56■■□□□ 1.68
IFITM3-204ENST00000602735 JPH4Q96JJ6 628 aa25.52■■□□□ 1.68
IFITM3-204ENST00000602735 ERICH3Q5RHP9 1530 aa25.52■■□□□ 1.68
IFITM3-204ENST00000602735 PRG4Q92954 1404 aaPredicted RBP25.49■■□□□ 1.67
IFITM3-204ENST00000602735 NPM1P06748 294 aaKnown RBP eCLIP25.49■■□□□ 1.67
IFITM3-204ENST00000602735 SHROOM2Q13796 1616 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms