RNA–Protein interactions for RNA: ENST00000478088.1

RPL18P13-201, Transcript of ribosomal protein L18 pseudogene 13, humanhuman

BASIC

Gene RPL18P13, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL18P13-201ENST00000478088 NISCHQ9Y2I1 1504 aa35.33■■■■□ 3.25
RPL18P13-201ENST00000478088 CCDC180Q9P1Z9 1646 aa31.36■■■□□ 2.61
RPL18P13-201ENST00000478088 ABCC9O60706 1549 aa31.26■■■□□ 2.59
RPL18P13-201ENST00000478088 RB1CC1Q8TDY2 1594 aa29.85■■■□□ 2.37
RPL18P13-201ENST00000478088 DCAF8L2P0C7V8 631 aa29.69■■■□□ 2.34
RPL18P13-201ENST00000478088 NACADO15069 1562 aa29.6■■■□□ 2.33
RPL18P13-201ENST00000478088 ZCCHC6Q5VYS8 1495 aaKnown RBP29.42■■■□□ 2.3
RPL18P13-201ENST00000478088 MYO15BQ96JP2 1530 aa29.26■■■□□ 2.27
RPL18P13-201ENST00000478088 DNAJC5BQ9UF47 199 aa29.18■■■□□ 2.26
RPL18P13-201ENST00000478088 DCAF1Q9Y4B6 1507 aa29.17■■■□□ 2.26
RPL18P13-201ENST00000478088 UNC13AQ9UPW8 1703 aa29.14■■■□□ 2.26
RPL18P13-201ENST00000478088 PABPN1Q86U42 306 aaKnown RBP eCLIP29.02■■■□□ 2.24
RPL18P13-201ENST00000478088 BICRAQ9NZM4 1560 aa28.85■■■□□ 2.21
RPL18P13-201ENST00000478088 SCRIBQ14160 1630 aa28.65■■■□□ 2.18
RPL18P13-201ENST00000478088 SHROOM4Q9ULL8 1493 aa28.61■■■□□ 2.17
RPL18P13-201ENST00000478088 CC2D2AQ9P2K1 1620 aa28.28■■■□□ 2.12
RPL18P13-201ENST00000478088 EIF4G1Q04637 1599 aaKnown RBP28.21■■■□□ 2.11
RPL18P13-201ENST00000478088 CECR2Q9BXF3 1484 aa28.2■■■□□ 2.1
RPL18P13-201ENST00000478088 SMARCA4P51532 1647 aa27.37■■□□□ 1.97
RPL18P13-201ENST00000478088 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
RPL18P13-201ENST00000478088 ATAD2BQ9ULI0 1458 aa27.27■■□□□ 1.96
RPL18P13-201ENST00000478088 MROH2BQ7Z745 1585 aa27.26■■□□□ 1.96
RPL18P13-201ENST00000478088 NCAPD3P42695 1498 aa27.25■■□□□ 1.95
RPL18P13-201ENST00000478088 SMARCA2P51531 1590 aa27.19■■□□□ 1.94
RPL18P13-201ENST00000478088 HMGXB3Q12766 1538 aa27.13■■□□□ 1.93
RPL18P13-201ENST00000478088 ERCC6Q03468 1493 aa27.09■■□□□ 1.93
RPL18P13-201ENST00000478088 PEG3Q9GZU2 1588 aa27.07■■□□□ 1.92
RPL18P13-201ENST00000478088 CUX2O14529 1486 aa27.04■■□□□ 1.92
RPL18P13-201ENST00000478088 BAZ1BQ9UIG0 1483 aaKnown RBP27.03■■□□□ 1.92
RPL18P13-201ENST00000478088 RSF1Q96T23 1441 aaPredicted RBP26.99■■□□□ 1.91
RPL18P13-201ENST00000478088 DNAJC5Q9H3Z4 198 aa26.94■■□□□ 1.9
RPL18P13-201ENST00000478088 WIZO95785 1651 aa26.93■■□□□ 1.9
RPL18P13-201ENST00000478088 NESP48681 1621 aa26.8■■□□□ 1.88
RPL18P13-201ENST00000478088 LAMC3Q9Y6N6 1575 aa26.74■■□□□ 1.87
RPL18P13-201ENST00000478088 TOP2AP11388 1531 aaKnown RBP26.63■■□□□ 1.85
RPL18P13-201ENST00000478088 THOC2Q8NI27 1593 aaKnown RBP26.63■■□□□ 1.85
RPL18P13-201ENST00000478088 KIF21AQ7Z4S6 1674 aa26.57■■□□□ 1.84
RPL18P13-201ENST00000478088 PDS5BQ9NTI5 1447 aa26.56■■□□□ 1.84
RPL18P13-201ENST00000478088 CADPSQ9ULU8 1353 aa26.48■■□□□ 1.83
RPL18P13-201ENST00000478088 SUPT5HO00267 1087 aaKnown RBP26.44■■□□□ 1.82
RPL18P13-201ENST00000478088 CCDC88BA6NC98 1476 aa26.39■■□□□ 1.82
RPL18P13-201ENST00000478088 MRC2Q9UBG0 1479 aa26.33■■□□□ 1.81
RPL18P13-201ENST00000478088 CFTRP13569 1480 aa26.3■■□□□ 1.8
RPL18P13-201ENST00000478088 WDR62O43379 1518 aa26.26■■□□□ 1.79
RPL18P13-201ENST00000478088 CEP164Q9UPV0 1460 aa26.23■■□□□ 1.79
RPL18P13-201ENST00000478088 FANCD2Q9BXW9 1451 aa26.16■■□□□ 1.78
RPL18P13-201ENST00000478088 PRDM2Q13029 1718 aa26.03■■□□□ 1.76
RPL18P13-201ENST00000478088 URB2Q14146 1524 aaKnown RBP25.9■■□□□ 1.74
RPL18P13-201ENST00000478088 TRIM41Q8WV44 630 aa25.8■■□□□ 1.72
RPL18P13-201ENST00000478088 OSCARQ8IYS5 282 aa25.74■■□□□ 1.71
RPL18P13-201ENST00000478088 TOPBP1Q92547 1522 aa25.73■■□□□ 1.71
RPL18P13-201ENST00000478088 IFT140Q96RY7 1462 aa25.7■■□□□ 1.7
RPL18P13-201ENST00000478088 ABCC8Q09428 1581 aa25.69■■□□□ 1.7
RPL18P13-201ENST00000478088 DNMBPQ6XZF7 1577 aa25.66■■□□□ 1.7
RPL18P13-201ENST00000478088 ZNF608Q9ULD9 1512 aaPredicted RBP25.57■■□□□ 1.68
RPL18P13-201ENST00000478088 CUX1P39880 1505 aa25.56■■□□□ 1.68
RPL18P13-201ENST00000478088 EIF4G3O43432 1585 aaKnown RBP25.54■■□□□ 1.68
RPL18P13-201ENST00000478088 POLA1P09884 1462 aaPredicted RBP25.53■■□□□ 1.68
RPL18P13-201ENST00000478088 FGD5Q6ZNL6 1462 aa25.47■■□□□ 1.67
RPL18P13-201ENST00000478088 RAD54L2Q9Y4B4 1467 aa25.47■■□□□ 1.67
RPL18P13-201ENST00000478088 SOGA1O94964 1423 aa25.46■■□□□ 1.67
RPL18P13-201ENST00000478088 RIMBP3CA6NJZ7 1639 aa25.45■■□□□ 1.66
RPL18P13-201ENST00000478088 RIMBP3BA6NNM3 1639 aa25.45■■□□□ 1.66
RPL18P13-201ENST00000478088 RIMBP3Q9UFD9 1639 aa25.45■■□□□ 1.66
RPL18P13-201ENST00000478088 TARBP1Q13395 1621 aaKnown RBP25.43■■□□□ 1.66
RPL18P13-201ENST00000478088 WRNQ14191 1432 aaPredicted RBP eCLIP25.42■■□□□ 1.66
RPL18P13-201ENST00000478088 CHD1O14646 1710 aa25.37■■□□□ 1.65
RPL18P13-201ENST00000478088 AQRO60306 1485 aaKnown RBP eCLIP25.37■■□□□ 1.65
RPL18P13-201ENST00000478088 TDRD9Q8NDG6 1382 aaKnown RBP25.35■■□□□ 1.65
RPL18P13-201ENST00000478088 ARHGEF11O15085 1522 aa25.34■■□□□ 1.65
RPL18P13-201ENST00000478088 SYNJ1O43426 1573 aa25.33■■□□□ 1.65
RPL18P13-201ENST00000478088 TOP2BQ02880 1626 aa25.3■■□□□ 1.64
RPL18P13-201ENST00000478088 WDR97A6NE52 1622 aa25.28■■□□□ 1.64
RPL18P13-201ENST00000478088 BIVM-ERCC5R4GMW8 1640 aa25.26■■□□□ 1.63
RPL18P13-201ENST00000478088 FBLN2P98095 1184 aa25.24■■□□□ 1.63
RPL18P13-201ENST00000478088 ABCA10Q8WWZ4 1543 aa25.2■■□□□ 1.62
RPL18P13-201ENST00000478088 SNAPC4Q5SXM2 1469 aa25.14■■□□□ 1.61
RPL18P13-201ENST00000478088 GAPVD1Q14C86 1478 aa25.13■■□□□ 1.61
RPL18P13-201ENST00000478088 GRIN2BQ13224 1484 aa25.12■■□□□ 1.61
RPL18P13-201ENST00000478088 MAGI1Q96QZ7 1491 aaPredicted RBP25.11■■□□□ 1.61
RPL18P13-201ENST00000478088 CYB5RLQ6IPT4 315 aa25.11■■□□□ 1.61
RPL18P13-201ENST00000478088 PBRM1Q86U86 1689 aa25.06■■□□□ 1.6
RPL18P13-201ENST00000478088 ABCA5Q8WWZ7 1642 aa25.05■■□□□ 1.6
RPL18P13-201ENST00000478088 ARAP1Q96P48 1450 aa25.05■■□□□ 1.6
RPL18P13-201ENST00000478088 CHMP7Q8WUX9 453 aaPredicted RBP25.05■■□□□ 1.6
RPL18P13-201ENST00000478088 SYNJ2O15056 1496 aa25.02■■□□□ 1.6
RPL18P13-201ENST00000478088 CLASP1Q7Z460 1538 aa25.02■■□□□ 1.6
RPL18P13-201ENST00000478088 TRHP20396 242 aaPredicted RBP24.91■■□□□ 1.58
RPL18P13-201ENST00000478088 KIF27Q86VH2 1401 aa24.89■■□□□ 1.58
RPL18P13-201ENST00000478088 ERICH3Q5RHP9 1530 aa24.87■■□□□ 1.57
RPL18P13-201ENST00000478088 IGF1RP08069 1367 aa24.84■■□□□ 1.57
RPL18P13-201ENST00000478088 FHAD1B1AJZ9 1412 aa24.84■■□□□ 1.57
RPL18P13-201ENST00000478088 ADAMTS12P58397 1594 aa24.82■■□□□ 1.56
RPL18P13-201ENST00000478088 GRIN2AQ12879 1464 aa24.78■■□□□ 1.56
RPL18P13-201ENST00000478088 RUSC2Q8N2Y8 1516 aa24.74■■□□□ 1.55
RPL18P13-201ENST00000478088 CHIC1Q5VXU3 224 aa24.68■■□□□ 1.54
RPL18P13-201ENST00000478088 NUP160Q12769 1436 aa24.68■■□□□ 1.54
RPL18P13-201ENST00000478088 CARMIL1Q5VZK9 1371 aa24.67■■□□□ 1.54
RPL18P13-201ENST00000478088 CEP170Q5SW79 1584 aa24.64■■□□□ 1.54
RPL18P13-201ENST00000478088 CUL7Q14999 1698 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms