RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 NISCHQ9Y2I1 1504 aa34.61■■■■□ 3.13
LAMA4-208ENST00000431543 CCDC180Q9P1Z9 1646 aa30.7■■■□□ 2.51
LAMA4-208ENST00000431543 ABCC9O60706 1549 aa30.27■■■□□ 2.44
LAMA4-208ENST00000431543 DCAF8L2P0C7V8 631 aa29.09■■■□□ 2.25
LAMA4-208ENST00000431543 RB1CC1Q8TDY2 1594 aa28.97■■■□□ 2.23
LAMA4-208ENST00000431543 NACADO15069 1562 aa28.92■■■□□ 2.22
LAMA4-208ENST00000431543 ZCCHC6Q5VYS8 1495 aaKnown RBP28.78■■■□□ 2.2
LAMA4-208ENST00000431543 MYO15BQ96JP2 1530 aa28.69■■■□□ 2.18
LAMA4-208ENST00000431543 DCAF1Q9Y4B6 1507 aa28.56■■■□□ 2.16
LAMA4-208ENST00000431543 UNC13AQ9UPW8 1703 aa28.37■■■□□ 2.13
LAMA4-208ENST00000431543 PABPN1Q86U42 306 aaKnown RBP eCLIP28.35■■■□□ 2.13
LAMA4-208ENST00000431543 BICRAQ9NZM4 1560 aa28.17■■■□□ 2.1
LAMA4-208ENST00000431543 SCRIBQ14160 1630 aa28.12■■■□□ 2.09
LAMA4-208ENST00000431543 DNAJC5BQ9UF47 199 aa27.96■■■□□ 2.07
LAMA4-208ENST00000431543 SHROOM4Q9ULL8 1493 aa27.71■■■□□ 2.03
LAMA4-208ENST00000431543 EIF4G1Q04637 1599 aaKnown RBP27.4■■□□□ 1.98
LAMA4-208ENST00000431543 CC2D2AQ9P2K1 1620 aa27.33■■□□□ 1.97
LAMA4-208ENST00000431543 CECR2Q9BXF3 1484 aa27.16■■□□□ 1.94
LAMA4-208ENST00000431543 SMARCA4P51532 1647 aa26.85■■□□□ 1.89
LAMA4-208ENST00000431543 BAZ1AQ9NRL2 1556 aaPredicted RBP26.79■■□□□ 1.88
LAMA4-208ENST00000431543 ATAD2BQ9ULI0 1458 aa26.75■■□□□ 1.87
LAMA4-208ENST00000431543 NCAPD3P42695 1498 aa26.74■■□□□ 1.87
LAMA4-208ENST00000431543 MROH2BQ7Z745 1585 aa26.72■■□□□ 1.87
LAMA4-208ENST00000431543 SMARCA2P51531 1590 aa26.65■■□□□ 1.86
LAMA4-208ENST00000431543 PEG3Q9GZU2 1588 aa26.55■■□□□ 1.84
LAMA4-208ENST00000431543 HMGXB3Q12766 1538 aa26.54■■□□□ 1.84
LAMA4-208ENST00000431543 BAZ1BQ9UIG0 1483 aaKnown RBP26.5■■□□□ 1.83
LAMA4-208ENST00000431543 WIZO95785 1651 aa26.42■■□□□ 1.82
LAMA4-208ENST00000431543 RSF1Q96T23 1441 aaPredicted RBP26.39■■□□□ 1.82
LAMA4-208ENST00000431543 NESP48681 1621 aa26.2■■□□□ 1.78
LAMA4-208ENST00000431543 TOP2AP11388 1531 aaKnown RBP26.07■■□□□ 1.76
LAMA4-208ENST00000431543 ERCC6Q03468 1493 aa26.04■■□□□ 1.76
LAMA4-208ENST00000431543 LAMC3Q9Y6N6 1575 aa25.99■■□□□ 1.75
LAMA4-208ENST00000431543 CADPSQ9ULU8 1353 aa25.97■■□□□ 1.75
LAMA4-208ENST00000431543 PDS5BQ9NTI5 1447 aa25.85■■□□□ 1.73
LAMA4-208ENST00000431543 CCDC88BA6NC98 1476 aa25.84■■□□□ 1.73
LAMA4-208ENST00000431543 KIF21AQ7Z4S6 1674 aa25.81■■□□□ 1.72
LAMA4-208ENST00000431543 CFTRP13569 1480 aa25.79■■□□□ 1.72
LAMA4-208ENST00000431543 SUPT5HO00267 1087 aaKnown RBP25.75■■□□□ 1.71
LAMA4-208ENST00000431543 CUX2O14529 1486 aa25.73■■□□□ 1.71
LAMA4-208ENST00000431543 THOC2Q8NI27 1593 aaKnown RBP25.71■■□□□ 1.71
LAMA4-208ENST00000431543 FANCD2Q9BXW9 1451 aa25.67■■□□□ 1.7
LAMA4-208ENST00000431543 CEP164Q9UPV0 1460 aa25.6■■□□□ 1.69
LAMA4-208ENST00000431543 MRC2Q9UBG0 1479 aa25.6■■□□□ 1.69
LAMA4-208ENST00000431543 PRDM2Q13029 1718 aa25.49■■□□□ 1.67
LAMA4-208ENST00000431543 WDR62O43379 1518 aa25.49■■□□□ 1.67
LAMA4-208ENST00000431543 URB2Q14146 1524 aaKnown RBP25.44■■□□□ 1.66
LAMA4-208ENST00000431543 TOPBP1Q92547 1522 aa25.25■■□□□ 1.63
LAMA4-208ENST00000431543 ABCC8Q09428 1581 aa25.17■■□□□ 1.62
LAMA4-208ENST00000431543 DNMBPQ6XZF7 1577 aa25.17■■□□□ 1.62
LAMA4-208ENST00000431543 DNAJC5Q9H3Z4 198 aa25.15■■□□□ 1.62
LAMA4-208ENST00000431543 IFT140Q96RY7 1462 aa25.08■■□□□ 1.6
LAMA4-208ENST00000431543 CUX1P39880 1505 aa25.06■■□□□ 1.6
LAMA4-208ENST00000431543 ZNF608Q9ULD9 1512 aaPredicted RBP25.05■■□□□ 1.6
LAMA4-208ENST00000431543 POLA1P09884 1462 aaPredicted RBP25.02■■□□□ 1.6
LAMA4-208ENST00000431543 RAD54L2Q9Y4B4 1467 aa24.98■■□□□ 1.59
LAMA4-208ENST00000431543 TARBP1Q13395 1621 aaKnown RBP24.97■■□□□ 1.59
LAMA4-208ENST00000431543 FGD5Q6ZNL6 1462 aa24.96■■□□□ 1.59
LAMA4-208ENST00000431543 SOGA1O94964 1423 aa24.95■■□□□ 1.59
LAMA4-208ENST00000431543 AQRO60306 1485 aaKnown RBP eCLIP24.91■■□□□ 1.58
LAMA4-208ENST00000431543 TDRD9Q8NDG6 1382 aaKnown RBP24.87■■□□□ 1.57
LAMA4-208ENST00000431543 EIF4G3O43432 1585 aaKnown RBP24.87■■□□□ 1.57
LAMA4-208ENST00000431543 WRNQ14191 1432 aaPredicted RBP eCLIP24.85■■□□□ 1.57
LAMA4-208ENST00000431543 SYNJ1O43426 1573 aa24.8■■□□□ 1.56
LAMA4-208ENST00000431543 TOP2BQ02880 1626 aa24.77■■□□□ 1.56
LAMA4-208ENST00000431543 OSCARQ8IYS5 282 aa24.76■■□□□ 1.55
LAMA4-208ENST00000431543 BIVM-ERCC5R4GMW8 1640 aa24.75■■□□□ 1.55
LAMA4-208ENST00000431543 WDR97A6NE52 1622 aa24.7■■□□□ 1.54
LAMA4-208ENST00000431543 ABCA10Q8WWZ4 1543 aa24.69■■□□□ 1.54
LAMA4-208ENST00000431543 FBLN2P98095 1184 aa24.65■■□□□ 1.54
LAMA4-208ENST00000431543 GAPVD1Q14C86 1478 aa24.64■■□□□ 1.53
LAMA4-208ENST00000431543 GRIN2BQ13224 1484 aa24.63■■□□□ 1.53
LAMA4-208ENST00000431543 SNAPC4Q5SXM2 1469 aa24.63■■□□□ 1.53
LAMA4-208ENST00000431543 CHD1O14646 1710 aa24.58■■□□□ 1.53
LAMA4-208ENST00000431543 ABCA5Q8WWZ7 1642 aa24.58■■□□□ 1.53
LAMA4-208ENST00000431543 PBRM1Q86U86 1689 aa24.55■■□□□ 1.52
LAMA4-208ENST00000431543 MAGI1Q96QZ7 1491 aaPredicted RBP24.53■■□□□ 1.52
LAMA4-208ENST00000431543 CHMP7Q8WUX9 453 aaPredicted RBP24.53■■□□□ 1.52
LAMA4-208ENST00000431543 SYNJ2O15056 1496 aa24.46■■□□□ 1.51
LAMA4-208ENST00000431543 ERICH3Q5RHP9 1530 aa24.37■■□□□ 1.49
LAMA4-208ENST00000431543 ADAMTS12P58397 1594 aa24.35■■□□□ 1.49
LAMA4-208ENST00000431543 TRIM41Q8WV44 630 aa24.34■■□□□ 1.49
LAMA4-208ENST00000431543 FHAD1B1AJZ9 1412 aa24.34■■□□□ 1.49
LAMA4-208ENST00000431543 RIMBP3CA6NJZ7 1639 aa24.33■■□□□ 1.49
LAMA4-208ENST00000431543 RIMBP3BA6NNM3 1639 aa24.33■■□□□ 1.49
LAMA4-208ENST00000431543 RIMBP3Q9UFD9 1639 aa24.33■■□□□ 1.49
LAMA4-208ENST00000431543 KIF27Q86VH2 1401 aa24.32■■□□□ 1.48
LAMA4-208ENST00000431543 GRIN2AQ12879 1464 aa24.32■■□□□ 1.48
LAMA4-208ENST00000431543 ARHGEF11O15085 1522 aa24.31■■□□□ 1.48
LAMA4-208ENST00000431543 CLASP1Q7Z460 1538 aa24.31■■□□□ 1.48
LAMA4-208ENST00000431543 IGF1RP08069 1367 aa24.3■■□□□ 1.48
LAMA4-208ENST00000431543 CEP170Q5SW79 1584 aa24.21■■□□□ 1.47
LAMA4-208ENST00000431543 NUP160Q12769 1436 aa24.2■■□□□ 1.46
LAMA4-208ENST00000431543 RUSC2Q8N2Y8 1516 aa24.2■■□□□ 1.46
LAMA4-208ENST00000431543 CYB5RLQ6IPT4 315 aa24.19■■□□□ 1.46
LAMA4-208ENST00000431543 ARAP1Q96P48 1450 aa24.13■■□□□ 1.45
LAMA4-208ENST00000431543 CARMIL1Q5VZK9 1371 aa24.13■■□□□ 1.45
LAMA4-208ENST00000431543 CUL7Q14999 1698 aa24.11■■□□□ 1.45
LAMA4-208ENST00000431543 ERCC6L2Q5T890 1561 aa24.05■■□□□ 1.44
LAMA4-208ENST00000431543 JPH4Q96JJ6 628 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms