RNA–Protein interactions for RNA: ENST00000396658.8

UBN1-202, Transcript of ubinuclein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBN1, Length 6,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBN1-202ENST00000396658 DCAF8L2P0C7V8 631 aa21.59■■□□□ 1.05
UBN1-202ENST00000396658 SUPT5HO00267 1087 aaKnown RBP20.32■□□□□ 0.84
UBN1-202ENST00000396658 EHMT2Q96KQ7 1210 aa20.26■□□□□ 0.83
UBN1-202ENST00000396658 PELP1Q8IZL8 1130 aaKnown RBP20.1■□□□□ 0.81
UBN1-202ENST00000396658 SHROOM4Q9ULL8 1493 aa19.79■□□□□ 0.76
UBN1-202ENST00000396658 APLP2Q06481 763 aa19.67■□□□□ 0.74
UBN1-202ENST00000396658 TTBK1Q5TCY1 1321 aaPredicted RBP19.57■□□□□ 0.72
UBN1-202ENST00000396658 ERICH6Q7L0X2 663 aa19.51■□□□□ 0.71
UBN1-202ENST00000396658 FAM9AQ8IZU1 332 aaPredicted RBP19.36■□□□□ 0.69
UBN1-202ENST00000396658 RANGAP1P46060 587 aaPredicted RBP19.28■□□□□ 0.68
UBN1-202ENST00000396658 PCGF6Q9BYE7 350 aa19.23■□□□□ 0.67
UBN1-202ENST00000396658 CCER1Q8TC90 406 aaPredicted RBP19.22■□□□□ 0.67
UBN1-202ENST00000396658 ATP1B4Q9UN42 357 aaPredicted RBP19.14■□□□□ 0.65
UBN1-202ENST00000396658 CENPBP07199 599 aaPredicted RBP19.07■□□□□ 0.64
UBN1-202ENST00000396658 YTHDC1Q96MU7 727 aaKnown RBP18.9■□□□□ 0.62
UBN1-202ENST00000396658 NEFLP07196 543 aa18.88■□□□□ 0.61
UBN1-202ENST00000396658 MYT1Q01538 1121 aa18.79■□□□□ 0.6
UBN1-202ENST00000396658 NISCHQ9Y2I1 1504 aa18.75■□□□□ 0.59
UBN1-202ENST00000396658 ZEB1P37275 1124 aaPredicted RBP18.72■□□□□ 0.59
UBN1-202ENST00000396658 UBTFP17480 764 aaKnown RBP18.68■□□□□ 0.58
UBN1-202ENST00000396658 TRIM41Q8WV44 630 aa18.66■□□□□ 0.58
UBN1-202ENST00000396658 DAXXQ9UER7 740 aaPredicted RBP18.58■□□□□ 0.56
UBN1-202ENST00000396658 POLR3GLQ9BT43 218 aa18.55■□□□□ 0.56
UBN1-202ENST00000396658 MYT1LQ9UL68 1186 aa18.54■□□□□ 0.56
UBN1-202ENST00000396658 PPARGC1BQ86YN6 1023 aaKnown RBP18.54■□□□□ 0.56
UBN1-202ENST00000396658 CNGB1Q14028 1251 aaPredicted RBP18.44■□□□□ 0.54
UBN1-202ENST00000396658 CHIC1Q5VXU3 224 aa18.38■□□□□ 0.53
UBN1-202ENST00000396658 ITGAEP38570 1179 aa18.35■□□□□ 0.53
UBN1-202ENST00000396658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.34■□□□□ 0.53
UBN1-202ENST00000396658 HNRNPUL2Q1KMD3 747 aaKnown RBP18.34■□□□□ 0.53
UBN1-202ENST00000396658 SLC4A1APQ9BWU0 796 aaKnown RBP18.28■□□□□ 0.52
UBN1-202ENST00000396658 ZNF316A6NFI3 1004 aaPredicted RBP18.13■□□□□ 0.49
UBN1-202ENST00000396658 CLSPNQ9HAW4 1339 aa18.12■□□□□ 0.49
UBN1-202ENST00000396658 RTL5Q5HYW3 569 aaPredicted RBP18.02■□□□□ 0.48
UBN1-202ENST00000396658 TRIM26Q12899 539 aaPredicted RBP18.01■□□□□ 0.47
UBN1-202ENST00000396658 HRCP23327 699 aa17.96■□□□□ 0.47
UBN1-202ENST00000396658 BCL11AQ9H165 835 aa17.82■□□□□ 0.44
UBN1-202ENST00000396658 SLC24A1O60721 1099 aa17.77■□□□□ 0.44
UBN1-202ENST00000396658 LOC105371045A0A1W2PR82 267 aa17.76■□□□□ 0.43
UBN1-202ENST00000396658 BCANQ96GW7 911 aa17.75■□□□□ 0.43
UBN1-202ENST00000396658 TRIM52Q96A61 297 aa17.72■□□□□ 0.43
UBN1-202ENST00000396658 FAM50AQ14320 339 aaKnown RBP17.72■□□□□ 0.43
UBN1-202ENST00000396658 ZBTB47Q9UFB7 747 aaPredicted RBP17.72■□□□□ 0.43
UBN1-202ENST00000396658 NEUROD1Q13562 356 aa17.67■□□□□ 0.42
UBN1-202ENST00000396658 DIEXFQ68CQ4 756 aaKnown RBP17.65■□□□□ 0.42
UBN1-202ENST00000396658 ZNF326Q5BKZ1 582 aaKnown RBP17.65■□□□□ 0.42
UBN1-202ENST00000396658 CANXP27824 592 aaKnown RBP17.57■□□□□ 0.4
UBN1-202ENST00000396658 CDK11AQ9UQ88 783 aaPredicted RBP17.51■□□□□ 0.39
UBN1-202ENST00000396658 ANP32CO43423 234 aa17.46■□□□□ 0.39
UBN1-202ENST00000396658 NEFMP07197 916 aa17.4■□□□□ 0.38
UBN1-202ENST00000396658 GTF3C3Q9Y5Q9 886 aa17.39■□□□□ 0.37
UBN1-202ENST00000396658 FBLN2P98095 1184 aa17.36■□□□□ 0.37
UBN1-202ENST00000396658 NPM2Q86SE8 214 aaKnown RBP17.36■□□□□ 0.37
UBN1-202ENST00000396658 ARID3CA6NKF2 412 aa17.28■□□□□ 0.36
UBN1-202ENST00000396658 ANP32AP39687 249 aaKnown RBP17.26■□□□□ 0.35
UBN1-202ENST00000396658 EIF5BO60841 1220 aaKnown RBP17.24■□□□□ 0.35
UBN1-202ENST00000396658 PLPPR3Q6T4P5 718 aa17.24■□□□□ 0.35
UBN1-202ENST00000396658 HSP90AA1P07900 732 aaKnown RBP17.2■□□□□ 0.34
UBN1-202ENST00000396658 ANP32BQ92688 251 aaKnown RBP17.19■□□□□ 0.34
UBN1-202ENST00000396658 ZNF777Q9ULD5 760 aaPredicted RBP17.14■□□□□ 0.33
UBN1-202ENST00000396658 PABPN1Q86U42 306 aaKnown RBP eCLIP17.13■□□□□ 0.33
UBN1-202ENST00000396658 P3H3Q8IVL6 736 aa17.13■□□□□ 0.33
UBN1-202ENST00000396658 CHGAP10645 457 aaKnown RBP17.08■□□□□ 0.33
UBN1-202ENST00000396658 ESF1Q9H501 851 aaKnown RBP17.08■□□□□ 0.32
UBN1-202ENST00000396658 ARXQ96QS3 562 aa17.06■□□□□ 0.32
UBN1-202ENST00000396658 STAG3Q9UJ98 1225 aa17.06■□□□□ 0.32
UBN1-202ENST00000396658 SALL2Q9Y467 1007 aaPredicted RBP17.03■□□□□ 0.32
UBN1-202ENST00000396658 UPF2Q9HAU5 1272 aaKnown RBP17.02■□□□□ 0.31
UBN1-202ENST00000396658 FKBP8Q14318 412 aa16.99■□□□□ 0.31
UBN1-202ENST00000396658 A0A0G2JS52 829 aa16.96■□□□□ 0.31
UBN1-202ENST00000396658 SCAF1Q9H7N4 1312 aaKnown RBP16.95■□□□□ 0.3
UBN1-202ENST00000396658 FAM9BQ8IZU0 186 aa16.94■□□□□ 0.3
UBN1-202ENST00000396658 NBR1Q14596 966 aa16.93■□□□□ 0.3
UBN1-202ENST00000396658 ACIN1Q9UKV3 1341 aaKnown RBP16.91■□□□□ 0.3
UBN1-202ENST00000396658 CDK11BP21127 795 aaKnown RBP16.9■□□□□ 0.3
UBN1-202ENST00000396658 HNRNPUQ00839 825 aaKnown RBP eCLIP16.89■□□□□ 0.29
UBN1-202ENST00000396658 PLEKHG5O94827 1062 aa16.87■□□□□ 0.29
UBN1-202ENST00000396658 GLIPR1L2Q4G1C9 344 aa16.87■□□□□ 0.29
UBN1-202ENST00000396658 ZBTB7CA1YPR0 619 aa16.83■□□□□ 0.29
UBN1-202ENST00000396658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.81■□□□□ 0.281e-6■■■□□ 17.6
UBN1-202ENST00000396658 SENP3Q9H4L4 574 aaPredicted RBP16.8■□□□□ 0.28
UBN1-202ENST00000396658 TONSLQ96HA7 1378 aa16.8■□□□□ 0.28
UBN1-202ENST00000396658 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.8■□□□□ 0.28
UBN1-202ENST00000396658 CCDC136Q96JN2 1154 aa16.79■□□□□ 0.28
UBN1-202ENST00000396658 DDX10Q13206 875 aaKnown RBP16.78■□□□□ 0.28
UBN1-202ENST00000396658 ABCC9O60706 1549 aa16.77■□□□□ 0.28
UBN1-202ENST00000396658 WDR43Q15061 677 aaKnown RBP eCLIP16.76■□□□□ 0.27
UBN1-202ENST00000396658 TMC1Q8TDI8 760 aa16.75■□□□□ 0.27
UBN1-202ENST00000396658 TULP1O00294 542 aaPredicted RBP16.74■□□□□ 0.27
UBN1-202ENST00000396658 MYH16Q9H6N6 1097 aa16.72■□□□□ 0.27
UBN1-202ENST00000396658 IRX6P78412 446 aaPredicted RBP16.71■□□□□ 0.26
UBN1-202ENST00000396658 KDM2AQ9Y2K7 1162 aa16.71■□□□□ 0.26
UBN1-202ENST00000396658 NPM1P06748 294 aaKnown RBP eCLIP16.7■□□□□ 0.26
UBN1-202ENST00000396658 C14orf37Q86TY3 774 aa16.7■□□□□ 0.26
UBN1-202ENST00000396658 CHIC2Q9UKJ5 165 aa16.7■□□□□ 0.26
UBN1-202ENST00000396658 TPRNQ4KMQ1 711 aa16.68■□□□□ 0.26
UBN1-202ENST00000396658 NCLP19338 710 aaKnown RBP16.62■□□□□ 0.25
UBN1-202ENST00000396658 CSRNP3Q8WYN3 585 aa16.62■□□□□ 0.25
UBN1-202ENST00000396658 MRS2Q9HD23 443 aa16.61■□□□□ 0.25
UBN1-202ENST00000396658 TRIM44Q96DX7 344 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms