Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CCDC144NLQ6NUI1 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC11.24□□□□□ -0.61
CCDC144NLQ6NUI1 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 PES1P2-201ENST00000449745 1735 ntBASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 HLA-DMA-203ENST00000395305 777 ntBASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 HPGD-203ENST00000422112 805 ntTSL 2 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 AC105129.2-201ENST00000559536 390 ntBASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 HERC2P11-201ENST00000562845 725 ntBASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 AC100756.2-201ENST00000569537 736 ntBASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 MIR4522-201ENST00000584932 87 ntBASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 HCG18-245ENST00000602550 559 ntTSL 4 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 AC068587.10-201ENST00000641210 219 ntBASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 ODCP-201ENST00000459650 1639 ntBASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CCDC144NLQ6NUI1 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 AC020763.3-201ENST00000625095 2904 ntBASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 GUSBP10-201ENST00000417412 665 ntBASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CCDC144NLQ6NUI1 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms