RNA–Protein interactions for RNA: ENST00000400304.1

PCBP3-201, Transcript of poly(rC) binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCBP3, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP3-201ENST00000400304 NISCHQ9Y2I1 1504 aa34.66■■■■□ 3.14
PCBP3-201ENST00000400304 CCDC180Q9P1Z9 1646 aa30.83■■■□□ 2.53
PCBP3-201ENST00000400304 ABCC9O60706 1549 aa30.28■■■□□ 2.44
PCBP3-201ENST00000400304 RB1CC1Q8TDY2 1594 aa29.05■■■□□ 2.24
PCBP3-201ENST00000400304 NACADO15069 1562 aa29.02■■■□□ 2.24
PCBP3-201ENST00000400304 DCAF8L2P0C7V8 631 aa28.9■■■□□ 2.22
PCBP3-201ENST00000400304 MYO15BQ96JP2 1530 aa28.86■■■□□ 2.21
PCBP3-201ENST00000400304 ZCCHC6Q5VYS8 1495 aaKnown RBP28.85■■■□□ 2.21
PCBP3-201ENST00000400304 DCAF1Q9Y4B6 1507 aa28.69■■■□□ 2.18
PCBP3-201ENST00000400304 UNC13AQ9UPW8 1703 aa28.48■■■□□ 2.15
PCBP3-201ENST00000400304 PABPN1Q86U42 306 aaKnown RBP eCLIP28.3■■■□□ 2.12
PCBP3-201ENST00000400304 BICRAQ9NZM4 1560 aa28.29■■■□□ 2.12
PCBP3-201ENST00000400304 SCRIBQ14160 1630 aa28.09■■■□□ 2.09
PCBP3-201ENST00000400304 DNAJC5BQ9UF47 199 aa28.05■■■□□ 2.08
PCBP3-201ENST00000400304 SHROOM4Q9ULL8 1493 aa27.89■■■□□ 2.05
PCBP3-201ENST00000400304 EIF4G1Q04637 1599 aaKnown RBP27.48■■□□□ 1.99
PCBP3-201ENST00000400304 CC2D2AQ9P2K1 1620 aa27.41■■□□□ 1.98
PCBP3-201ENST00000400304 CECR2Q9BXF3 1484 aa27.22■■□□□ 1.95
PCBP3-201ENST00000400304 SMARCA4P51532 1647 aa26.9■■□□□ 1.9
PCBP3-201ENST00000400304 NCAPD3P42695 1498 aa26.83■■□□□ 1.89
PCBP3-201ENST00000400304 BAZ1AQ9NRL2 1556 aaPredicted RBP26.82■■□□□ 1.88
PCBP3-201ENST00000400304 ATAD2BQ9ULI0 1458 aa26.81■■□□□ 1.88
PCBP3-201ENST00000400304 MROH2BQ7Z745 1585 aa26.73■■□□□ 1.87
PCBP3-201ENST00000400304 SMARCA2P51531 1590 aa26.71■■□□□ 1.87
PCBP3-201ENST00000400304 PEG3Q9GZU2 1588 aa26.68■■□□□ 1.86
PCBP3-201ENST00000400304 HMGXB3Q12766 1538 aa26.64■■□□□ 1.85
PCBP3-201ENST00000400304 BAZ1BQ9UIG0 1483 aaKnown RBP26.51■■□□□ 1.83
PCBP3-201ENST00000400304 WIZO95785 1651 aa26.41■■□□□ 1.82
PCBP3-201ENST00000400304 RSF1Q96T23 1441 aaPredicted RBP26.39■■□□□ 1.81
PCBP3-201ENST00000400304 NESP48681 1621 aa26.21■■□□□ 1.79
PCBP3-201ENST00000400304 TOP2AP11388 1531 aaKnown RBP26.09■■□□□ 1.77
PCBP3-201ENST00000400304 LAMC3Q9Y6N6 1575 aa26.07■■□□□ 1.76
PCBP3-201ENST00000400304 CADPSQ9ULU8 1353 aa26.02■■□□□ 1.76
PCBP3-201ENST00000400304 ERCC6Q03468 1493 aa26.02■■□□□ 1.76
PCBP3-201ENST00000400304 PDS5BQ9NTI5 1447 aa25.88■■□□□ 1.73
PCBP3-201ENST00000400304 KIF21AQ7Z4S6 1674 aa25.87■■□□□ 1.73
PCBP3-201ENST00000400304 CUX2O14529 1486 aa25.86■■□□□ 1.73
PCBP3-201ENST00000400304 CFTRP13569 1480 aa25.85■■□□□ 1.73
PCBP3-201ENST00000400304 CCDC88BA6NC98 1476 aa25.84■■□□□ 1.73
PCBP3-201ENST00000400304 THOC2Q8NI27 1593 aaKnown RBP25.82■■□□□ 1.72
PCBP3-201ENST00000400304 FANCD2Q9BXW9 1451 aa25.68■■□□□ 1.7
PCBP3-201ENST00000400304 MRC2Q9UBG0 1479 aa25.64■■□□□ 1.69
PCBP3-201ENST00000400304 CEP164Q9UPV0 1460 aa25.63■■□□□ 1.69
PCBP3-201ENST00000400304 WDR62O43379 1518 aa25.59■■□□□ 1.69
PCBP3-201ENST00000400304 PRDM2Q13029 1718 aa25.59■■□□□ 1.69
PCBP3-201ENST00000400304 SUPT5HO00267 1087 aaKnown RBP25.52■■□□□ 1.68
PCBP3-201ENST00000400304 URB2Q14146 1524 aaKnown RBP25.48■■□□□ 1.67
PCBP3-201ENST00000400304 DNAJC5Q9H3Z4 198 aa25.29■■□□□ 1.64
PCBP3-201ENST00000400304 TOPBP1Q92547 1522 aa25.28■■□□□ 1.64
PCBP3-201ENST00000400304 ABCC8Q09428 1581 aa25.23■■□□□ 1.63
PCBP3-201ENST00000400304 DNMBPQ6XZF7 1577 aa25.22■■□□□ 1.63
PCBP3-201ENST00000400304 IFT140Q96RY7 1462 aa25.12■■□□□ 1.61
PCBP3-201ENST00000400304 CUX1P39880 1505 aa25.07■■□□□ 1.6
PCBP3-201ENST00000400304 ZNF608Q9ULD9 1512 aaPredicted RBP25.07■■□□□ 1.6
PCBP3-201ENST00000400304 POLA1P09884 1462 aaPredicted RBP25.07■■□□□ 1.6
PCBP3-201ENST00000400304 TARBP1Q13395 1621 aaKnown RBP25.05■■□□□ 1.6
PCBP3-201ENST00000400304 FGD5Q6ZNL6 1462 aa24.96■■□□□ 1.59
PCBP3-201ENST00000400304 RAD54L2Q9Y4B4 1467 aa24.96■■□□□ 1.59
PCBP3-201ENST00000400304 SOGA1O94964 1423 aa24.95■■□□□ 1.58
PCBP3-201ENST00000400304 EIF4G3O43432 1585 aaKnown RBP24.91■■□□□ 1.58
PCBP3-201ENST00000400304 AQRO60306 1485 aaKnown RBP eCLIP24.9■■□□□ 1.58
PCBP3-201ENST00000400304 TDRD9Q8NDG6 1382 aaKnown RBP24.83■■□□□ 1.57
PCBP3-201ENST00000400304 WRNQ14191 1432 aaPredicted RBP eCLIP24.81■■□□□ 1.56
PCBP3-201ENST00000400304 BIVM-ERCC5R4GMW8 1640 aa24.8■■□□□ 1.56
PCBP3-201ENST00000400304 SYNJ1O43426 1573 aa24.8■■□□□ 1.56
PCBP3-201ENST00000400304 WDR97A6NE52 1622 aa24.79■■□□□ 1.56
PCBP3-201ENST00000400304 TOP2BQ02880 1626 aa24.79■■□□□ 1.56
PCBP3-201ENST00000400304 OSCARQ8IYS5 282 aa24.78■■□□□ 1.56
PCBP3-201ENST00000400304 ABCA10Q8WWZ4 1543 aa24.74■■□□□ 1.55
PCBP3-201ENST00000400304 ABCA5Q8WWZ7 1642 aa24.65■■□□□ 1.54
PCBP3-201ENST00000400304 GRIN2BQ13224 1484 aa24.64■■□□□ 1.54
PCBP3-201ENST00000400304 GAPVD1Q14C86 1478 aa24.64■■□□□ 1.54
PCBP3-201ENST00000400304 CHD1O14646 1710 aa24.63■■□□□ 1.53
PCBP3-201ENST00000400304 SNAPC4Q5SXM2 1469 aa24.63■■□□□ 1.53
PCBP3-201ENST00000400304 MAGI1Q96QZ7 1491 aaPredicted RBP24.59■■□□□ 1.53
PCBP3-201ENST00000400304 PBRM1Q86U86 1689 aa24.58■■□□□ 1.53
PCBP3-201ENST00000400304 FBLN2P98095 1184 aa24.53■■□□□ 1.52
PCBP3-201ENST00000400304 SYNJ2O15056 1496 aa24.51■■□□□ 1.51
PCBP3-201ENST00000400304 CHMP7Q8WUX9 453 aaPredicted RBP24.47■■□□□ 1.51
PCBP3-201ENST00000400304 ERICH3Q5RHP9 1530 aa24.42■■□□□ 1.5
PCBP3-201ENST00000400304 CLASP1Q7Z460 1538 aa24.4■■□□□ 1.5
PCBP3-201ENST00000400304 RIMBP3CA6NJZ7 1639 aa24.4■■□□□ 1.5
PCBP3-201ENST00000400304 RIMBP3BA6NNM3 1639 aa24.4■■□□□ 1.5
PCBP3-201ENST00000400304 RIMBP3Q9UFD9 1639 aa24.4■■□□□ 1.5
PCBP3-201ENST00000400304 ADAMTS12P58397 1594 aa24.4■■□□□ 1.5
PCBP3-201ENST00000400304 ARHGEF11O15085 1522 aa24.39■■□□□ 1.49
PCBP3-201ENST00000400304 FHAD1B1AJZ9 1412 aa24.35■■□□□ 1.49
PCBP3-201ENST00000400304 GRIN2AQ12879 1464 aa24.34■■□□□ 1.49
PCBP3-201ENST00000400304 IGF1RP08069 1367 aa24.3■■□□□ 1.48
PCBP3-201ENST00000400304 NUP160Q12769 1436 aa24.28■■□□□ 1.48
PCBP3-201ENST00000400304 KIF27Q86VH2 1401 aa24.28■■□□□ 1.48
PCBP3-201ENST00000400304 TRIM41Q8WV44 630 aa24.28■■□□□ 1.48
PCBP3-201ENST00000400304 CEP170Q5SW79 1584 aa24.25■■□□□ 1.47
PCBP3-201ENST00000400304 ARAP1Q96P48 1450 aa24.2■■□□□ 1.47
PCBP3-201ENST00000400304 CYB5RLQ6IPT4 315 aa24.16■■□□□ 1.46
PCBP3-201ENST00000400304 RUSC2Q8N2Y8 1516 aa24.14■■□□□ 1.45
PCBP3-201ENST00000400304 CUL7Q14999 1698 aa24.13■■□□□ 1.45
PCBP3-201ENST00000400304 SHROOM2Q13796 1616 aa24.11■■□□□ 1.45
PCBP3-201ENST00000400304 CARMIL1Q5VZK9 1371 aa24.09■■□□□ 1.45
PCBP3-201ENST00000400304 ERCC6L2Q5T890 1561 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms