RNA–Protein interactions for RNA: ENST00000562845.1

HERC2P11-201, Transcript of hect domain and RLD 2 pseudogene 11, humanhuman

BASIC

Gene HERC2P11, Length 725 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P11-201ENST00000562845 NISCHQ9Y2I1 1504 aa33.83■■■■□ 3.01
HERC2P11-201ENST00000562845 CCDC180Q9P1Z9 1646 aa30.06■■■□□ 2.4
HERC2P11-201ENST00000562845 ABCC9O60706 1549 aa29.73■■■□□ 2.35
HERC2P11-201ENST00000562845 DCAF8L2P0C7V8 631 aa28.67■■■□□ 2.18
HERC2P11-201ENST00000562845 RB1CC1Q8TDY2 1594 aa28.45■■■□□ 2.15
HERC2P11-201ENST00000562845 NACADO15069 1562 aa28.36■■■□□ 2.13
HERC2P11-201ENST00000562845 ZCCHC6Q5VYS8 1495 aaKnown RBP28.08■■■□□ 2.09
HERC2P11-201ENST00000562845 MYO15BQ96JP2 1530 aa28.05■■■□□ 2.08
HERC2P11-201ENST00000562845 DCAF1Q9Y4B6 1507 aa27.89■■■□□ 2.06
HERC2P11-201ENST00000562845 PABPN1Q86U42 306 aaKnown RBP eCLIP27.86■■■□□ 2.05
HERC2P11-201ENST00000562845 UNC13AQ9UPW8 1703 aa27.77■■■□□ 2.04
HERC2P11-201ENST00000562845 BICRAQ9NZM4 1560 aa27.54■■■□□ 2
HERC2P11-201ENST00000562845 SCRIBQ14160 1630 aa27.53■■■□□ 2
HERC2P11-201ENST00000562845 DNAJC5BQ9UF47 199 aa27.47■■□□□ 1.99
HERC2P11-201ENST00000562845 SHROOM4Q9ULL8 1493 aa27.17■■□□□ 1.94
HERC2P11-201ENST00000562845 EIF4G1Q04637 1599 aaKnown RBP26.87■■□□□ 1.89
HERC2P11-201ENST00000562845 CC2D2AQ9P2K1 1620 aa26.83■■□□□ 1.88
HERC2P11-201ENST00000562845 CECR2Q9BXF3 1484 aa26.71■■□□□ 1.87
HERC2P11-201ENST00000562845 SMARCA4P51532 1647 aa26.26■■□□□ 1.79
HERC2P11-201ENST00000562845 BAZ1AQ9NRL2 1556 aaPredicted RBP26.23■■□□□ 1.79
HERC2P11-201ENST00000562845 NCAPD3P42695 1498 aa26.18■■□□□ 1.78
HERC2P11-201ENST00000562845 ATAD2BQ9ULI0 1458 aa26.18■■□□□ 1.78
HERC2P11-201ENST00000562845 SMARCA2P51531 1590 aa26.14■■□□□ 1.78
HERC2P11-201ENST00000562845 MROH2BQ7Z745 1585 aa26.08■■□□□ 1.77
HERC2P11-201ENST00000562845 BAZ1BQ9UIG0 1483 aaKnown RBP26■■□□□ 1.75
HERC2P11-201ENST00000562845 HMGXB3Q12766 1538 aa25.98■■□□□ 1.75
HERC2P11-201ENST00000562845 PEG3Q9GZU2 1588 aa25.94■■□□□ 1.74
HERC2P11-201ENST00000562845 WIZO95785 1651 aa25.82■■□□□ 1.72
HERC2P11-201ENST00000562845 RSF1Q96T23 1441 aaPredicted RBP25.74■■□□□ 1.71
HERC2P11-201ENST00000562845 NESP48681 1621 aa25.66■■□□□ 1.7
HERC2P11-201ENST00000562845 ERCC6Q03468 1493 aa25.66■■□□□ 1.7
HERC2P11-201ENST00000562845 LAMC3Q9Y6N6 1575 aa25.51■■□□□ 1.67
HERC2P11-201ENST00000562845 TOP2AP11388 1531 aaKnown RBP25.47■■□□□ 1.67
HERC2P11-201ENST00000562845 CADPSQ9ULU8 1353 aa25.46■■□□□ 1.67
HERC2P11-201ENST00000562845 PDS5BQ9NTI5 1447 aa25.42■■□□□ 1.66
HERC2P11-201ENST00000562845 CUX2O14529 1486 aa25.34■■□□□ 1.65
HERC2P11-201ENST00000562845 KIF21AQ7Z4S6 1674 aa25.3■■□□□ 1.64
HERC2P11-201ENST00000562845 CCDC88BA6NC98 1476 aa25.25■■□□□ 1.63
HERC2P11-201ENST00000562845 CFTRP13569 1480 aa25.22■■□□□ 1.63
HERC2P11-201ENST00000562845 SUPT5HO00267 1087 aaKnown RBP25.22■■□□□ 1.63
HERC2P11-201ENST00000562845 THOC2Q8NI27 1593 aaKnown RBP25.18■■□□□ 1.62
HERC2P11-201ENST00000562845 FANCD2Q9BXW9 1451 aa25.16■■□□□ 1.62
HERC2P11-201ENST00000562845 CEP164Q9UPV0 1460 aa25.14■■□□□ 1.61
HERC2P11-201ENST00000562845 MRC2Q9UBG0 1479 aa25.12■■□□□ 1.61
HERC2P11-201ENST00000562845 WDR62O43379 1518 aa24.98■■□□□ 1.59
HERC2P11-201ENST00000562845 PRDM2Q13029 1718 aa24.98■■□□□ 1.59
HERC2P11-201ENST00000562845 URB2Q14146 1524 aaKnown RBP24.89■■□□□ 1.57
HERC2P11-201ENST00000562845 DNAJC5Q9H3Z4 198 aa24.86■■□□□ 1.57
HERC2P11-201ENST00000562845 ABCC8Q09428 1581 aa24.73■■□□□ 1.55
HERC2P11-201ENST00000562845 TOPBP1Q92547 1522 aa24.72■■□□□ 1.55
HERC2P11-201ENST00000562845 DNMBPQ6XZF7 1577 aa24.65■■□□□ 1.54
HERC2P11-201ENST00000562845 IFT140Q96RY7 1462 aa24.61■■□□□ 1.53
HERC2P11-201ENST00000562845 ZNF608Q9ULD9 1512 aaPredicted RBP24.53■■□□□ 1.52
HERC2P11-201ENST00000562845 POLA1P09884 1462 aaPredicted RBP24.5■■□□□ 1.51
HERC2P11-201ENST00000562845 SOGA1O94964 1423 aa24.49■■□□□ 1.51
HERC2P11-201ENST00000562845 CUX1P39880 1505 aa24.46■■□□□ 1.51
HERC2P11-201ENST00000562845 RAD54L2Q9Y4B4 1467 aa24.45■■□□□ 1.51
HERC2P11-201ENST00000562845 OSCARQ8IYS5 282 aa24.44■■□□□ 1.5
HERC2P11-201ENST00000562845 FGD5Q6ZNL6 1462 aa24.44■■□□□ 1.5
HERC2P11-201ENST00000562845 AQRO60306 1485 aaKnown RBP eCLIP24.43■■□□□ 1.5
HERC2P11-201ENST00000562845 TARBP1Q13395 1621 aaKnown RBP24.42■■□□□ 1.5
HERC2P11-201ENST00000562845 TDRD9Q8NDG6 1382 aaKnown RBP24.39■■□□□ 1.49
HERC2P11-201ENST00000562845 EIF4G3O43432 1585 aaKnown RBP24.37■■□□□ 1.49
HERC2P11-201ENST00000562845 FBLN2P98095 1184 aa24.33■■□□□ 1.49
HERC2P11-201ENST00000562845 WRNQ14191 1432 aaPredicted RBP eCLIP24.3■■□□□ 1.48
HERC2P11-201ENST00000562845 TOP2BQ02880 1626 aa24.2■■□□□ 1.46
HERC2P11-201ENST00000562845 SYNJ1O43426 1573 aa24.2■■□□□ 1.46
HERC2P11-201ENST00000562845 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
HERC2P11-201ENST00000562845 CHMP7Q8WUX9 453 aaPredicted RBP24.17■■□□□ 1.46
HERC2P11-201ENST00000562845 WDR97A6NE52 1622 aa24.17■■□□□ 1.46
HERC2P11-201ENST00000562845 ABCA10Q8WWZ4 1543 aa24.15■■□□□ 1.46
HERC2P11-201ENST00000562845 GRIN2BQ13224 1484 aa24.15■■□□□ 1.46
HERC2P11-201ENST00000562845 GAPVD1Q14C86 1478 aa24.15■■□□□ 1.46
HERC2P11-201ENST00000562845 SNAPC4Q5SXM2 1469 aa24.13■■□□□ 1.45
HERC2P11-201ENST00000562845 CHD1O14646 1710 aa24.13■■□□□ 1.45
HERC2P11-201ENST00000562845 TRIM41Q8WV44 630 aa24.11■■□□□ 1.45
HERC2P11-201ENST00000562845 MAGI1Q96QZ7 1491 aaPredicted RBP24.07■■□□□ 1.44
HERC2P11-201ENST00000562845 PBRM1Q86U86 1689 aa24.05■■□□□ 1.44
HERC2P11-201ENST00000562845 ABCA5Q8WWZ7 1642 aa24.02■■□□□ 1.44
HERC2P11-201ENST00000562845 SYNJ2O15056 1496 aa24■■□□□ 1.43
HERC2P11-201ENST00000562845 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
HERC2P11-201ENST00000562845 RIMBP3BA6NNM3 1639 aa23.92■■□□□ 1.42
HERC2P11-201ENST00000562845 RIMBP3Q9UFD9 1639 aa23.92■■□□□ 1.42
HERC2P11-201ENST00000562845 ARHGEF11O15085 1522 aa23.89■■□□□ 1.41
HERC2P11-201ENST00000562845 CYB5RLQ6IPT4 315 aa23.87■■□□□ 1.41
HERC2P11-201ENST00000562845 ERICH3Q5RHP9 1530 aa23.86■■□□□ 1.41
HERC2P11-201ENST00000562845 FHAD1B1AJZ9 1412 aa23.85■■□□□ 1.41
HERC2P11-201ENST00000562845 KIF27Q86VH2 1401 aa23.83■■□□□ 1.4
HERC2P11-201ENST00000562845 ADAMTS12P58397 1594 aa23.82■■□□□ 1.4
HERC2P11-201ENST00000562845 GRIN2AQ12879 1464 aa23.82■■□□□ 1.4
HERC2P11-201ENST00000562845 CLASP1Q7Z460 1538 aa23.79■■□□□ 1.4
HERC2P11-201ENST00000562845 IGF1RP08069 1367 aa23.75■■□□□ 1.39
HERC2P11-201ENST00000562845 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
HERC2P11-201ENST00000562845 NUP160Q12769 1436 aa23.68■■□□□ 1.38
HERC2P11-201ENST00000562845 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
HERC2P11-201ENST00000562845 CARMIL1Q5VZK9 1371 aa23.64■■□□□ 1.37
HERC2P11-201ENST00000562845 JPH4Q96JJ6 628 aa23.61■■□□□ 1.37
HERC2P11-201ENST00000562845 CUL7Q14999 1698 aa23.6■■□□□ 1.37
HERC2P11-201ENST00000562845 RUSC2Q8N2Y8 1516 aa23.58■■□□□ 1.36
HERC2P11-201ENST00000562845 ERCC6L2Q5T890 1561 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms