RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 PELP1Q8IZL8 1130 aaKnown RBP22.81■■□□□ 1.24
PPP4R3B-205ENST00000616288 MYT1Q01538 1121 aa22.27■■□□□ 1.16
PPP4R3B-205ENST00000616288 PCGF6Q9BYE7 350 aa22.24■■□□□ 1.15
PPP4R3B-205ENST00000616288 HRCP23327 699 aa22.21■■□□□ 1.15
PPP4R3B-205ENST00000616288 PPARGC1BQ86YN6 1023 aaKnown RBP22.02■■□□□ 1.12
PPP4R3B-205ENST00000616288 SUPT5HO00267 1087 aaKnown RBP21.96■■□□□ 1.11
PPP4R3B-205ENST00000616288 NISCHQ9Y2I1 1504 aa21.81■■□□□ 1.08
PPP4R3B-205ENST00000616288 SHROOM4Q9ULL8 1493 aa21.43■■□□□ 1.02
PPP4R3B-205ENST00000616288 CENPBP07199 599 aaPredicted RBP21.4■■□□□ 1.02
PPP4R3B-205ENST00000616288 SCAF1Q9H7N4 1312 aaKnown RBP21.33■■□□□ 1.01
PPP4R3B-205ENST00000616288 ZEB1P37275 1124 aaPredicted RBP21.22■□□□□ 0.99
PPP4R3B-205ENST00000616288 YTHDC1Q96MU7 727 aaKnown RBP21.06■□□□□ 0.96
PPP4R3B-205ENST00000616288 EHMT2Q96KQ7 1210 aa21.05■□□□□ 0.96
PPP4R3B-205ENST00000616288 GTF3C3Q9Y5Q9 886 aa21.04■□□□□ 0.96
PPP4R3B-205ENST00000616288 DCAF8L2P0C7V8 631 aa20.94■□□□□ 0.94
PPP4R3B-205ENST00000616288 TRIM26Q12899 539 aaPredicted RBP20.92■□□□□ 0.94
PPP4R3B-205ENST00000616288 ACIN1Q9UKV3 1341 aaKnown RBP20.83■□□□□ 0.93
PPP4R3B-205ENST00000616288 CCER1Q8TC90 406 aaPredicted RBP20.79■□□□□ 0.92
PPP4R3B-205ENST00000616288 NEUROD1Q13562 356 aa20.71■□□□□ 0.91
PPP4R3B-205ENST00000616288 LOC105371045A0A1W2PR82 267 aa20.69■□□□□ 0.9
PPP4R3B-205ENST00000616288 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
PPP4R3B-205ENST00000616288 TTBK1Q5TCY1 1321 aaPredicted RBP20.63■□□□□ 0.89
PPP4R3B-205ENST00000616288 FAM9AQ8IZU1 332 aaPredicted RBP20.6■□□□□ 0.89
PPP4R3B-205ENST00000616288 ERICH6Q7L0X2 663 aa20.59■□□□□ 0.89
PPP4R3B-205ENST00000616288 DIEXFQ68CQ4 756 aaKnown RBP20.56■□□□□ 0.88
PPP4R3B-205ENST00000616288 BCL11AQ9H165 835 aa20.4■□□□□ 0.86
PPP4R3B-205ENST00000616288 MYO15BQ96JP2 1530 aa20.38■□□□□ 0.85
PPP4R3B-205ENST00000616288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
PPP4R3B-205ENST00000616288 DCAF1Q9Y4B6 1507 aa20.1■□□□□ 0.81
PPP4R3B-205ENST00000616288 NEFLP07196 543 aa20.07■□□□□ 0.8
PPP4R3B-205ENST00000616288 BCANQ96GW7 911 aa20.06■□□□□ 0.8
PPP4R3B-205ENST00000616288 ANP32EQ9BTT0 268 aa20.05■□□□□ 0.8
PPP4R3B-205ENST00000616288 TRIM41Q8WV44 630 aa20.02■□□□□ 0.79
PPP4R3B-205ENST00000616288 PRKCSHP14314 528 aaPredicted RBP19.84■□□□□ 0.77
PPP4R3B-205ENST00000616288 ZNF316A6NFI3 1004 aaPredicted RBP19.83■□□□□ 0.77
PPP4R3B-205ENST00000616288 CSRNP3Q8WYN3 585 aa19.81■□□□□ 0.76
PPP4R3B-205ENST00000616288 CCDC180Q9P1Z9 1646 aa19.78■□□□□ 0.76
PPP4R3B-205ENST00000616288 MIER1Q8N108 512 aa19.67■□□□□ 0.74
PPP4R3B-205ENST00000616288 APLP2Q06481 763 aa19.65■□□□□ 0.74
PPP4R3B-205ENST00000616288 HNRNPUL2Q1KMD3 747 aaKnown RBP19.6■□□□□ 0.73
PPP4R3B-205ENST00000616288 RTL5Q5HYW3 569 aaPredicted RBP19.6■□□□□ 0.73
PPP4R3B-205ENST00000616288 EIF5BO60841 1220 aaKnown RBP19.55■□□□□ 0.72
PPP4R3B-205ENST00000616288 FKBP8Q14318 412 aa19.52■□□□□ 0.72
PPP4R3B-205ENST00000616288 TSHZ2Q9NRE2 1034 aa19.5■□□□□ 0.71
PPP4R3B-205ENST00000616288 SUPT16HQ9Y5B9 1047 aaKnown RBP19.48■□□□□ 0.71
PPP4R3B-205ENST00000616288 CLSPNQ9HAW4 1339 aa19.45■□□□□ 0.7
PPP4R3B-205ENST00000616288 RANGAP1P46060 587 aaPredicted RBP19.43■□□□□ 0.7
PPP4R3B-205ENST00000616288 CDK11AQ9UQ88 783 aaPredicted RBP19.41■□□□□ 0.7
PPP4R3B-205ENST00000616288 ITGAEP38570 1179 aa19.4■□□□□ 0.7
PPP4R3B-205ENST00000616288 NBR1Q14596 966 aa19.39■□□□□ 0.7
PPP4R3B-205ENST00000616288 UBTFP17480 764 aaKnown RBP19.38■□□□□ 0.69
PPP4R3B-205ENST00000616288 RTN4Q9NQC3 1192 aaKnown RBP19.29■□□□□ 0.68
PPP4R3B-205ENST00000616288 MYT1LQ9UL68 1186 aa19.26■□□□□ 0.67
PPP4R3B-205ENST00000616288 RBM19Q9Y4C8 960 aaKnown RBP19.21■□□□□ 0.67
PPP4R3B-205ENST00000616288 DEKP35659 375 aaKnown RBP19.2■□□□□ 0.66
PPP4R3B-205ENST00000616288 CCDC136Q96JN2 1154 aa19.19■□□□□ 0.66
PPP4R3B-205ENST00000616288 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.14■□□□□ 0.65
PPP4R3B-205ENST00000616288 ANO8Q9HCE9 1232 aaPredicted RBP19.14■□□□□ 0.65
PPP4R3B-205ENST00000616288 TRIM52Q96A61 297 aa19.07■□□□□ 0.64
PPP4R3B-205ENST00000616288 DAXXQ9UER7 740 aaPredicted RBP19.07■□□□□ 0.64
PPP4R3B-205ENST00000616288 IRX6P78412 446 aaPredicted RBP19.04■□□□□ 0.64
PPP4R3B-205ENST00000616288 ANP32AP39687 249 aaKnown RBP19■□□□□ 0.63
PPP4R3B-205ENST00000616288 NPM2Q86SE8 214 aaKnown RBP18.95■□□□□ 0.62
PPP4R3B-205ENST00000616288 GLIPR1L2Q4G1C9 344 aa18.94■□□□□ 0.62
PPP4R3B-205ENST00000616288 CNGB1Q14028 1251 aaPredicted RBP18.93■□□□□ 0.62
PPP4R3B-205ENST00000616288 ANP32CO43423 234 aa18.92■□□□□ 0.62
PPP4R3B-205ENST00000616288 DDX10Q13206 875 aaKnown RBP18.88■□□□□ 0.61
PPP4R3B-205ENST00000616288 ZBTB47Q9UFB7 747 aaPredicted RBP18.88■□□□□ 0.61
PPP4R3B-205ENST00000616288 SALL2Q9Y467 1007 aaPredicted RBP18.85■□□□□ 0.61
PPP4R3B-205ENST00000616288 HNRNPUQ00839 825 aaKnown RBP eCLIP18.79■□□□□ 0.6
PPP4R3B-205ENST00000616288 NOP58Q9Y2X3 529 aaKnown RBP18.77■□□□□ 0.6
PPP4R3B-205ENST00000616288 MSH5O43196 834 aa18.72■□□□□ 0.59
PPP4R3B-205ENST00000616288 KCNH8Q96L42 1107 aa18.68■□□□□ 0.58
PPP4R3B-205ENST00000616288 ERICH6BQ5W0A0 696 aa18.68■□□□□ 0.58
PPP4R3B-205ENST00000616288 NEFMP07197 916 aa18.65■□□□□ 0.58
PPP4R3B-205ENST00000616288 ATP1B4Q9UN42 357 aaPredicted RBP18.65■□□□□ 0.58
PPP4R3B-205ENST00000616288 POLR3GLQ9BT43 218 aa18.65■□□□□ 0.58
PPP4R3B-205ENST00000616288 LAS1LQ9Y4W2 734 aaKnown RBP18.64■□□□□ 0.57
PPP4R3B-205ENST00000616288 HIRIP3Q9BW71 556 aaPredicted RBP18.63■□□□□ 0.57
PPP4R3B-205ENST00000616288 ARXQ96QS3 562 aa18.57■□□□□ 0.56
PPP4R3B-205ENST00000616288 B4GALNT3Q6L9W6 998 aa18.56■□□□□ 0.56
PPP4R3B-205ENST00000616288 IL27Q8NEV9 243 aa18.55■□□□□ 0.56
PPP4R3B-205ENST00000616288 FANCIQ9NVI1 1328 aa18.53■□□□□ 0.56
PPP4R3B-205ENST00000616288 TIMELESSQ9UNS1 1208 aa18.5■□□□□ 0.55
PPP4R3B-205ENST00000616288 FAM9BQ8IZU0 186 aa18.49■□□□□ 0.55
PPP4R3B-205ENST00000616288 PKNOX2Q96KN3 472 aa18.49■□□□□ 0.55
PPP4R3B-205ENST00000616288 ZCCHC6Q5VYS8 1495 aaKnown RBP18.46■□□□□ 0.55
PPP4R3B-205ENST00000616288 PPP4R2Q9NY27 417 aa18.46■□□□□ 0.55
PPP4R3B-205ENST00000616288 UBE2Q2Q8WVN8 375 aa18.45■□□□□ 0.54
PPP4R3B-205ENST00000616288 VSIG10Q8N0Z9 540 aa18.44■□□□□ 0.54
PPP4R3B-205ENST00000616288 NAP1L5Q96NT1 182 aaPredicted RBP18.4■□□□□ 0.54
PPP4R3B-205ENST00000616288 PPM1GO15355 546 aaPredicted RBP18.35■□□□□ 0.53
PPP4R3B-205ENST00000616288 FAM50AQ14320 339 aaKnown RBP18.35■□□□□ 0.53
PPP4R3B-205ENST00000616288 SENP3-EIF4A1A0A087X0R7 540 aa18.32■□□□□ 0.52
PPP4R3B-205ENST00000616288 ARID4BQ4LE39 1312 aaPredicted RBP18.31■□□□□ 0.52
PPP4R3B-205ENST00000616288 PAK3O75914 559 aaPredicted RBP18.3■□□□□ 0.52
PPP4R3B-205ENST00000616288 IPO9Q96P70 1041 aaKnown RBP18.29■□□□□ 0.52
PPP4R3B-205ENST00000616288 PODXL2Q9NZ53 605 aa18.27■□□□□ 0.52
PPP4R3B-205ENST00000616288 CEP162Q5TB80 1403 aa18.27■□□□□ 0.52
PPP4R3B-205ENST00000616288 MRS2Q9HD23 443 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms