Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf42Q8N5U0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf42Q8N5U0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf42Q8N5U0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf42Q8N5U0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.49■□□□□ 0.55
C11orf42Q8N5U0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf42Q8N5U0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
C11orf42Q8N5U0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C11orf42Q8N5U0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
C11orf42Q8N5U0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
C11orf42Q8N5U0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C11orf42Q8N5U0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
C11orf42Q8N5U0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
C11orf42Q8N5U0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C11orf42Q8N5U0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.48■□□□□ 0.55
C11orf42Q8N5U0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C11orf42Q8N5U0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C11orf42Q8N5U0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.48■□□□□ 0.55
C11orf42Q8N5U0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
C11orf42Q8N5U0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C11orf42Q8N5U0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
C11orf42Q8N5U0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
C11orf42Q8N5U0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
C11orf42Q8N5U0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
C11orf42Q8N5U0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C11orf42Q8N5U0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
C11orf42Q8N5U0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
C11orf42Q8N5U0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
C11orf42Q8N5U0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
C11orf42Q8N5U0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.47■□□□□ 0.55
C11orf42Q8N5U0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
C11orf42Q8N5U0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C11orf42Q8N5U0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.47■□□□□ 0.55
C11orf42Q8N5U0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
C11orf42Q8N5U0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
C11orf42Q8N5U0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
C11orf42Q8N5U0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.46■□□□□ 0.55
C11orf42Q8N5U0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.46■□□□□ 0.55
C11orf42Q8N5U0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.46■□□□□ 0.55
C11orf42Q8N5U0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
C11orf42Q8N5U0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
C11orf42Q8N5U0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.46■□□□□ 0.55
C11orf42Q8N5U0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
C11orf42Q8N5U0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.46■□□□□ 0.55
C11orf42Q8N5U0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.46■□□□□ 0.55
C11orf42Q8N5U0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
C11orf42Q8N5U0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
C11orf42Q8N5U0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.46■□□□□ 0.55
C11orf42Q8N5U0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
C11orf42Q8N5U0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
C11orf42Q8N5U0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
C11orf42Q8N5U0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf42Q8N5U0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf42Q8N5U0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
C11orf42Q8N5U0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.45■□□□□ 0.54
C11orf42Q8N5U0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
C11orf42Q8N5U0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.45■□□□□ 0.54
C11orf42Q8N5U0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
C11orf42Q8N5U0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.45■□□□□ 0.54
C11orf42Q8N5U0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf42Q8N5U0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf42Q8N5U0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf42Q8N5U0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf42Q8N5U0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf42Q8N5U0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf42Q8N5U0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C11orf42Q8N5U0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C11orf42Q8N5U0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
C11orf42Q8N5U0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.44■□□□□ 0.54
C11orf42Q8N5U0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.44■□□□□ 0.54
C11orf42Q8N5U0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
C11orf42Q8N5U0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C11orf42Q8N5U0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
C11orf42Q8N5U0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C11orf42Q8N5U0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
C11orf42Q8N5U0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
C11orf42Q8N5U0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.43■□□□□ 0.54
C11orf42Q8N5U0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C11orf42Q8N5U0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C11orf42Q8N5U0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.43■□□□□ 0.54
C11orf42Q8N5U0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C11orf42Q8N5U0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
C11orf42Q8N5U0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
C11orf42Q8N5U0 AC079630.1-202ENST00000618127 1840 ntBASIC18.43■□□□□ 0.54
C11orf42Q8N5U0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
C11orf42Q8N5U0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C11orf42Q8N5U0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C11orf42Q8N5U0 ANOS2P-203ENST00000472227 1816 ntBASIC18.42■□□□□ 0.54
C11orf42Q8N5U0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.42■□□□□ 0.54
C11orf42Q8N5U0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.42■□□□□ 0.54
C11orf42Q8N5U0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.42■□□□□ 0.54
C11orf42Q8N5U0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.42■□□□□ 0.54
C11orf42Q8N5U0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf42Q8N5U0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
C11orf42Q8N5U0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf42Q8N5U0 AC008406.3-201ENST00000620001 1374 ntBASIC18.42■□□□□ 0.54
C11orf42Q8N5U0 AC144652.1-201ENST00000609974 1624 ntBASIC18.41■□□□□ 0.54
C11orf42Q8N5U0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C11orf42Q8N5U0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C11orf42Q8N5U0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms