Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 OR2K2-202ENST00000374428 1038 ntBASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 FTH1P22-201ENST00000456305 520 ntBASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 TMEM198B-204ENST00000484016 896 ntBASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 AC132825.4-202ENST00000578792 434 ntBASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 SIGLEC22P-201ENST00000599104 714 ntBASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 AF254983.2-201ENST00000612331 135 ntBASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.48□□□□□ -0.41
PARPBPQ9NWS1 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 CAP2P1-201ENST00000557743 1390 ntBASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 IMP3P2-201ENST00000489760 475 ntBASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 COQ10BP2-201ENST00000513804 724 ntBASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 AC103810.10-201ENST00000606504 343 ntBASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PARPBPQ9NWS1 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms