RNA–Protein interactions for RNA: ENST00000563554.1

AC009163.3-201, humanhuman

TSL 3 BASIC

Gene AC009163.3, Length 852 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.3-201ENST00000563554 NISCHQ9Y2I1 1504 aa33.89■■■■□ 3.02
AC009163.3-201ENST00000563554 CCDC180Q9P1Z9 1646 aa30.24■■■□□ 2.43
AC009163.3-201ENST00000563554 AEBP2Q6ZN18 517 aaPredicted RBP29.28■■■□□ 2.28
AC009163.3-201ENST00000563554 ABCC9O60706 1549 aa29.1■■■□□ 2.25
AC009163.3-201ENST00000563554 ZCCHC6Q5VYS8 1495 aaKnown RBP28.32■■■□□ 2.12
AC009163.3-201ENST00000563554 RB1CC1Q8TDY2 1594 aa28.21■■■□□ 2.11
AC009163.3-201ENST00000563554 NACADO15069 1562 aa28.2■■■□□ 2.1
AC009163.3-201ENST00000563554 MYO15BQ96JP2 1530 aa28.06■■■□□ 2.08
AC009163.3-201ENST00000563554 DCAF1Q9Y4B6 1507 aa28.06■■■□□ 2.08
AC009163.3-201ENST00000563554 DCAF8L2P0C7V8 631 aa28.05■■■□□ 2.08
AC009163.3-201ENST00000563554 UNC13AQ9UPW8 1703 aa27.84■■■□□ 2.05
AC009163.3-201ENST00000563554 SCRIBQ14160 1630 aa27.55■■■□□ 2
AC009163.3-201ENST00000563554 CHIC1Q5VXU3 224 aa27.36■■□□□ 1.97
AC009163.3-201ENST00000563554 BICRAQ9NZM4 1560 aa27.33■■□□□ 1.97
AC009163.3-201ENST00000563554 PABPN1Q86U42 306 aaKnown RBP eCLIP27.1■■□□□ 1.93
AC009163.3-201ENST00000563554 SHROOM4Q9ULL8 1493 aa27.04■■□□□ 1.92
AC009163.3-201ENST00000563554 EIF4G1Q04637 1599 aaKnown RBP26.59■■□□□ 1.85
AC009163.3-201ENST00000563554 CC2D2AQ9P2K1 1620 aa26.44■■□□□ 1.82
AC009163.3-201ENST00000563554 SMARCA4P51532 1647 aa26.36■■□□□ 1.81
AC009163.3-201ENST00000563554 CECR2Q9BXF3 1484 aa26.32■■□□□ 1.8
AC009163.3-201ENST00000563554 BAZ1AQ9NRL2 1556 aaPredicted RBP26.3■■□□□ 1.8
AC009163.3-201ENST00000563554 DNAJC5BQ9UF47 199 aa26.27■■□□□ 1.8
AC009163.3-201ENST00000563554 MROH2BQ7Z745 1585 aa26.12■■□□□ 1.77
AC009163.3-201ENST00000563554 SMARCA2P51531 1590 aa26.07■■□□□ 1.76
AC009163.3-201ENST00000563554 PEG3Q9GZU2 1588 aa26.04■■□□□ 1.76
AC009163.3-201ENST00000563554 WIZO95785 1651 aa25.99■■□□□ 1.75
AC009163.3-201ENST00000563554 ATAD2BQ9ULI0 1458 aa25.98■■□□□ 1.75
AC009163.3-201ENST00000563554 HMGXB3Q12766 1538 aa25.94■■□□□ 1.74
AC009163.3-201ENST00000563554 NCAPD3P42695 1498 aa25.89■■□□□ 1.73
AC009163.3-201ENST00000563554 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
AC009163.3-201ENST00000563554 RSF1Q96T23 1441 aaPredicted RBP25.84■■□□□ 1.73
AC009163.3-201ENST00000563554 TOP2AP11388 1531 aaKnown RBP25.67■■□□□ 1.7
AC009163.3-201ENST00000563554 PRDM2Q13029 1718 aa25.36■■□□□ 1.65
AC009163.3-201ENST00000563554 SUPT5HO00267 1087 aaKnown RBP25.34■■□□□ 1.65
AC009163.3-201ENST00000563554 LAMC3Q9Y6N6 1575 aa25.33■■□□□ 1.65
AC009163.3-201ENST00000563554 NESP48681 1621 aa25.27■■□□□ 1.64
AC009163.3-201ENST00000563554 CCDC88BA6NC98 1476 aa25.25■■□□□ 1.63
AC009163.3-201ENST00000563554 KIF21AQ7Z4S6 1674 aa25.23■■□□□ 1.63
AC009163.3-201ENST00000563554 CADPSQ9ULU8 1353 aa25.13■■□□□ 1.61
AC009163.3-201ENST00000563554 ERCC6Q03468 1493 aa25.09■■□□□ 1.61
AC009163.3-201ENST00000563554 CFTRP13569 1480 aa25.09■■□□□ 1.61
AC009163.3-201ENST00000563554 SENP3Q9H4L4 574 aaPredicted RBP25.07■■□□□ 1.6
AC009163.3-201ENST00000563554 PDS5BQ9NTI5 1447 aa25.01■■□□□ 1.59
AC009163.3-201ENST00000563554 THOC2Q8NI27 1593 aaKnown RBP24.98■■□□□ 1.59
AC009163.3-201ENST00000563554 FANCD2Q9BXW9 1451 aa24.93■■□□□ 1.58
AC009163.3-201ENST00000563554 CEP164Q9UPV0 1460 aa24.92■■□□□ 1.58
AC009163.3-201ENST00000563554 MRC2Q9UBG0 1479 aa24.82■■□□□ 1.56
AC009163.3-201ENST00000563554 WDR62O43379 1518 aa24.77■■□□□ 1.56
AC009163.3-201ENST00000563554 CUX2O14529 1486 aa24.71■■□□□ 1.55
AC009163.3-201ENST00000563554 URB2Q14146 1524 aaKnown RBP24.68■■□□□ 1.54
AC009163.3-201ENST00000563554 DNMBPQ6XZF7 1577 aa24.66■■□□□ 1.54
AC009163.3-201ENST00000563554 PHF23Q9BUL5 403 aaPredicted RBP24.65■■□□□ 1.54
AC009163.3-201ENST00000563554 TOPBP1Q92547 1522 aa24.59■■□□□ 1.53
AC009163.3-201ENST00000563554 ABCC8Q09428 1581 aa24.58■■□□□ 1.52
AC009163.3-201ENST00000563554 BIVM-ERCC5R4GMW8 1640 aa24.52■■□□□ 1.52
AC009163.3-201ENST00000563554 CUX1P39880 1505 aa24.51■■□□□ 1.51
AC009163.3-201ENST00000563554 SYNJ1O43426 1573 aa24.46■■□□□ 1.51
AC009163.3-201ENST00000563554 TOP2BQ02880 1626 aa24.44■■□□□ 1.5
AC009163.3-201ENST00000563554 WRNQ14191 1432 aaPredicted RBP eCLIP24.4■■□□□ 1.5
AC009163.3-201ENST00000563554 FGD5Q6ZNL6 1462 aa24.39■■□□□ 1.5
AC009163.3-201ENST00000563554 WDR97A6NE52 1622 aa24.39■■□□□ 1.49
AC009163.3-201ENST00000563554 POLA1P09884 1462 aaPredicted RBP24.38■■□□□ 1.49
AC009163.3-201ENST00000563554 TARBP1Q13395 1621 aaKnown RBP24.38■■□□□ 1.49
AC009163.3-201ENST00000563554 IFT140Q96RY7 1462 aa24.34■■□□□ 1.49
AC009163.3-201ENST00000563554 EIF4G3O43432 1585 aaKnown RBP24.29■■□□□ 1.48
AC009163.3-201ENST00000563554 RAD54L2Q9Y4B4 1467 aa24.25■■□□□ 1.47
AC009163.3-201ENST00000563554 PBRM1Q86U86 1689 aa24.22■■□□□ 1.47
AC009163.3-201ENST00000563554 SOGA1O94964 1423 aa24.21■■□□□ 1.47
AC009163.3-201ENST00000563554 ZNF608Q9ULD9 1512 aaPredicted RBP24.2■■□□□ 1.47
AC009163.3-201ENST00000563554 ABCA5Q8WWZ7 1642 aa24.15■■□□□ 1.46
AC009163.3-201ENST00000563554 ABCA10Q8WWZ4 1543 aa24.14■■□□□ 1.45
AC009163.3-201ENST00000563554 AQRO60306 1485 aaKnown RBP eCLIP24.06■■□□□ 1.44
AC009163.3-201ENST00000563554 CHD1O14646 1710 aa24.05■■□□□ 1.44
AC009163.3-201ENST00000563554 TDRD9Q8NDG6 1382 aaKnown RBP24.02■■□□□ 1.44
AC009163.3-201ENST00000563554 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
AC009163.3-201ENST00000563554 GRIN2BQ13224 1484 aa23.95■■□□□ 1.42
AC009163.3-201ENST00000563554 SNAPC4Q5SXM2 1469 aa23.93■■□□□ 1.42
AC009163.3-201ENST00000563554 MAGI1Q96QZ7 1491 aaPredicted RBP23.9■■□□□ 1.42
AC009163.3-201ENST00000563554 TRIM41Q8WV44 630 aa23.9■■□□□ 1.42
AC009163.3-201ENST00000563554 ADAMTS12P58397 1594 aa23.9■■□□□ 1.42
AC009163.3-201ENST00000563554 ERICH3Q5RHP9 1530 aa23.89■■□□□ 1.42
AC009163.3-201ENST00000563554 CUL7Q14999 1698 aa23.86■■□□□ 1.41
AC009163.3-201ENST00000563554 KIF27Q86VH2 1401 aa23.85■■□□□ 1.41
AC009163.3-201ENST00000563554 RUSC2Q8N2Y8 1516 aa23.79■■□□□ 1.4
AC009163.3-201ENST00000563554 SYNJ2O15056 1496 aa23.78■■□□□ 1.4
AC009163.3-201ENST00000563554 FHAD1B1AJZ9 1412 aa23.7■■□□□ 1.38
AC009163.3-201ENST00000563554 GRIN2AQ12879 1464 aa23.68■■□□□ 1.38
AC009163.3-201ENST00000563554 FBLN2P98095 1184 aa23.67■■□□□ 1.38
AC009163.3-201ENST00000563554 CHMP7Q8WUX9 453 aaPredicted RBP23.63■■□□□ 1.37
AC009163.3-201ENST00000563554 IGF1RP08069 1367 aa23.63■■□□□ 1.37
AC009163.3-201ENST00000563554 CEP170Q5SW79 1584 aa23.62■■□□□ 1.37
AC009163.3-201ENST00000563554 CLASP1Q7Z460 1538 aa23.59■■□□□ 1.37
AC009163.3-201ENST00000563554 CTTNBP2Q8WZ74 1663 aa23.59■■□□□ 1.37
AC009163.3-201ENST00000563554 EEA1Q15075 1411 aa23.59■■□□□ 1.37
AC009163.3-201ENST00000563554 OSCARQ8IYS5 282 aa23.58■■□□□ 1.37
AC009163.3-201ENST00000563554 CARMIL1Q5VZK9 1371 aa23.54■■□□□ 1.36
AC009163.3-201ENST00000563554 NUP160Q12769 1436 aa23.51■■□□□ 1.35
AC009163.3-201ENST00000563554 RAPGEF2Q9Y4G8 1499 aa23.5■■□□□ 1.35
AC009163.3-201ENST00000563554 KIF21BO75037 1637 aa23.48■■□□□ 1.35
AC009163.3-201ENST00000563554 SHROOM2Q13796 1616 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms