RNA–Protein interactions for RNA: ENST00000390595.3

IGHV1-3-201, Transcript of immunoglobulin heavy variable 1-3, humanhuman

APPRIS P1 BASIC

Gene IGHV1-3, Length 395 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV1-3-201ENST00000390595 NISCHQ9Y2I1 1504 aa32.97■■■□□ 2.87
IGHV1-3-201ENST00000390595 CCDC180Q9P1Z9 1646 aa29.15■■■□□ 2.26
IGHV1-3-201ENST00000390595 ABCC9O60706 1549 aa28.15■■■□□ 2.1
IGHV1-3-201ENST00000390595 ZCCHC6Q5VYS8 1495 aaKnown RBP27.55■■■□□ 2
IGHV1-3-201ENST00000390595 DCAF8L2P0C7V8 631 aa27.54■■■□□ 2
IGHV1-3-201ENST00000390595 NACADO15069 1562 aa27.31■■□□□ 1.96
IGHV1-3-201ENST00000390595 RB1CC1Q8TDY2 1594 aa27.27■■□□□ 1.96
IGHV1-3-201ENST00000390595 DCAF1Q9Y4B6 1507 aa27.27■■□□□ 1.96
IGHV1-3-201ENST00000390595 MYO15BQ96JP2 1530 aa27.23■■□□□ 1.95
IGHV1-3-201ENST00000390595 SCRIBQ14160 1630 aa26.68■■□□□ 1.86
IGHV1-3-201ENST00000390595 UNC13AQ9UPW8 1703 aa26.58■■□□□ 1.85
IGHV1-3-201ENST00000390595 SHROOM4Q9ULL8 1493 aa26.41■■□□□ 1.82
IGHV1-3-201ENST00000390595 PABPN1Q86U42 306 aaKnown RBP eCLIP26.38■■□□□ 1.81
IGHV1-3-201ENST00000390595 BICRAQ9NZM4 1560 aa26.32■■□□□ 1.8
IGHV1-3-201ENST00000390595 EIF4G1Q04637 1599 aaKnown RBP25.66■■□□□ 1.7
IGHV1-3-201ENST00000390595 CECR2Q9BXF3 1484 aa25.61■■□□□ 1.69
IGHV1-3-201ENST00000390595 BAZ1AQ9NRL2 1556 aaPredicted RBP25.57■■□□□ 1.68
IGHV1-3-201ENST00000390595 SMARCA4P51532 1647 aa25.52■■□□□ 1.68
IGHV1-3-201ENST00000390595 CC2D2AQ9P2K1 1620 aa25.46■■□□□ 1.67
IGHV1-3-201ENST00000390595 MROH2BQ7Z745 1585 aa25.41■■□□□ 1.66
IGHV1-3-201ENST00000390595 DNAJC5BQ9UF47 199 aa25.33■■□□□ 1.65
IGHV1-3-201ENST00000390595 SMARCA2P51531 1590 aa25.29■■□□□ 1.64
IGHV1-3-201ENST00000390595 RSF1Q96T23 1441 aaPredicted RBP25.27■■□□□ 1.64
IGHV1-3-201ENST00000390595 ATAD2BQ9ULI0 1458 aa25.25■■□□□ 1.63
IGHV1-3-201ENST00000390595 PEG3Q9GZU2 1588 aa25.21■■□□□ 1.63
IGHV1-3-201ENST00000390595 WIZO95785 1651 aa25.18■■□□□ 1.62
IGHV1-3-201ENST00000390595 NCAPD3P42695 1498 aa25.15■■□□□ 1.62
IGHV1-3-201ENST00000390595 BAZ1BQ9UIG0 1483 aaKnown RBP25.14■■□□□ 1.61
IGHV1-3-201ENST00000390595 HMGXB3Q12766 1538 aa25.1■■□□□ 1.61
IGHV1-3-201ENST00000390595 SUPT5HO00267 1087 aaKnown RBP25.08■■□□□ 1.61
IGHV1-3-201ENST00000390595 TOP2AP11388 1531 aaKnown RBP24.96■■□□□ 1.59
IGHV1-3-201ENST00000390595 CCDC88BA6NC98 1476 aa24.64■■□□□ 1.54
IGHV1-3-201ENST00000390595 CADPSQ9ULU8 1353 aa24.48■■□□□ 1.51
IGHV1-3-201ENST00000390595 LAMC3Q9Y6N6 1575 aa24.48■■□□□ 1.51
IGHV1-3-201ENST00000390595 NESP48681 1621 aa24.44■■□□□ 1.5
IGHV1-3-201ENST00000390595 CFTRP13569 1480 aa24.4■■□□□ 1.5
IGHV1-3-201ENST00000390595 PDS5BQ9NTI5 1447 aa24.34■■□□□ 1.49
IGHV1-3-201ENST00000390595 ERCC6Q03468 1493 aa24.31■■□□□ 1.48
IGHV1-3-201ENST00000390595 PRDM2Q13029 1718 aa24.29■■□□□ 1.48
IGHV1-3-201ENST00000390595 FANCD2Q9BXW9 1451 aa24.23■■□□□ 1.47
IGHV1-3-201ENST00000390595 CEP164Q9UPV0 1460 aa24.19■■□□□ 1.46
IGHV1-3-201ENST00000390595 KIF21AQ7Z4S6 1674 aa24.18■■□□□ 1.46
IGHV1-3-201ENST00000390595 MRC2Q9UBG0 1479 aa24.04■■□□□ 1.44
IGHV1-3-201ENST00000390595 THOC2Q8NI27 1593 aaKnown RBP23.97■■□□□ 1.43
IGHV1-3-201ENST00000390595 ABCC8Q09428 1581 aa23.93■■□□□ 1.42
IGHV1-3-201ENST00000390595 WDR62O43379 1518 aa23.91■■□□□ 1.42
IGHV1-3-201ENST00000390595 URB2Q14146 1524 aaKnown RBP23.91■■□□□ 1.42
IGHV1-3-201ENST00000390595 DNMBPQ6XZF7 1577 aa23.9■■□□□ 1.42
IGHV1-3-201ENST00000390595 WRNQ14191 1432 aaPredicted RBP eCLIP23.88■■□□□ 1.41
IGHV1-3-201ENST00000390595 TOPBP1Q92547 1522 aa23.87■■□□□ 1.41
IGHV1-3-201ENST00000390595 CUX1P39880 1505 aa23.83■■□□□ 1.41
IGHV1-3-201ENST00000390595 CUX2O14529 1486 aa23.81■■□□□ 1.4
IGHV1-3-201ENST00000390595 SYNJ1O43426 1573 aa23.76■■□□□ 1.39
IGHV1-3-201ENST00000390595 TOP2BQ02880 1626 aa23.75■■□□□ 1.39
IGHV1-3-201ENST00000390595 BIVM-ERCC5R4GMW8 1640 aa23.73■■□□□ 1.39
IGHV1-3-201ENST00000390595 FGD5Q6ZNL6 1462 aa23.71■■□□□ 1.39
IGHV1-3-201ENST00000390595 POLA1P09884 1462 aaPredicted RBP23.68■■□□□ 1.38
IGHV1-3-201ENST00000390595 TRIM41Q8WV44 630 aa23.68■■□□□ 1.38
IGHV1-3-201ENST00000390595 IFT140Q96RY7 1462 aa23.64■■□□□ 1.38
IGHV1-3-201ENST00000390595 SOGA1O94964 1423 aa23.63■■□□□ 1.37
IGHV1-3-201ENST00000390595 RAD54L2Q9Y4B4 1467 aa23.58■■□□□ 1.37
IGHV1-3-201ENST00000390595 CHIC1Q5VXU3 224 aa23.56■■□□□ 1.36
IGHV1-3-201ENST00000390595 TARBP1Q13395 1621 aaKnown RBP23.54■■□□□ 1.36
IGHV1-3-201ENST00000390595 ABCA10Q8WWZ4 1543 aa23.49■■□□□ 1.35
IGHV1-3-201ENST00000390595 ZNF608Q9ULD9 1512 aaPredicted RBP23.45■■□□□ 1.34
IGHV1-3-201ENST00000390595 WDR97A6NE52 1622 aa23.44■■□□□ 1.34
IGHV1-3-201ENST00000390595 TDRD9Q8NDG6 1382 aaKnown RBP23.43■■□□□ 1.34
IGHV1-3-201ENST00000390595 EIF4G3O43432 1585 aaKnown RBP23.42■■□□□ 1.34
IGHV1-3-201ENST00000390595 AQRO60306 1485 aaKnown RBP eCLIP23.4■■□□□ 1.34
IGHV1-3-201ENST00000390595 KIF27Q86VH2 1401 aa23.38■■□□□ 1.33
IGHV1-3-201ENST00000390595 GAPVD1Q14C86 1478 aa23.36■■□□□ 1.33
IGHV1-3-201ENST00000390595 ABCA5Q8WWZ7 1642 aa23.34■■□□□ 1.33
IGHV1-3-201ENST00000390595 GRIN2BQ13224 1484 aa23.3■■□□□ 1.32
IGHV1-3-201ENST00000390595 PBRM1Q86U86 1689 aa23.29■■□□□ 1.32
IGHV1-3-201ENST00000390595 ERICH3Q5RHP9 1530 aa23.23■■□□□ 1.31
IGHV1-3-201ENST00000390595 SNAPC4Q5SXM2 1469 aa23.22■■□□□ 1.31
IGHV1-3-201ENST00000390595 EEA1Q15075 1411 aa23.21■■□□□ 1.31
IGHV1-3-201ENST00000390595 RUSC2Q8N2Y8 1516 aa23.2■■□□□ 1.3
IGHV1-3-201ENST00000390595 MAGI1Q96QZ7 1491 aaPredicted RBP23.2■■□□□ 1.3
IGHV1-3-201ENST00000390595 FAM9AQ8IZU1 332 aaPredicted RBP23.19■■□□□ 1.3
IGHV1-3-201ENST00000390595 FBLN2P98095 1184 aa23.15■■□□□ 1.3
IGHV1-3-201ENST00000390595 IGF1RP08069 1367 aa23.14■■□□□ 1.3
IGHV1-3-201ENST00000390595 CUL7Q14999 1698 aa23.13■■□□□ 1.29
IGHV1-3-201ENST00000390595 ADAMTS12P58397 1594 aa23.12■■□□□ 1.29
IGHV1-3-201ENST00000390595 CHMP7Q8WUX9 453 aaPredicted RBP23.12■■□□□ 1.29
IGHV1-3-201ENST00000390595 FHAD1B1AJZ9 1412 aa23.11■■□□□ 1.29
IGHV1-3-201ENST00000390595 CSRNP3Q8WYN3 585 aa23.1■■□□□ 1.29
IGHV1-3-201ENST00000390595 SYNJ2O15056 1496 aa23.1■■□□□ 1.29
IGHV1-3-201ENST00000390595 CARMIL1Q5VZK9 1371 aa23.07■■□□□ 1.28
IGHV1-3-201ENST00000390595 CHD1O14646 1710 aa23.04■■□□□ 1.28
IGHV1-3-201ENST00000390595 GRIN2AQ12879 1464 aa23■■□□□ 1.27
IGHV1-3-201ENST00000390595 RAPGEF2Q9Y4G8 1499 aa22.99■■□□□ 1.27
IGHV1-3-201ENST00000390595 PRXQ9BXM0 1461 aa22.95■■□□□ 1.26
IGHV1-3-201ENST00000390595 OSCARQ8IYS5 282 aa22.93■■□□□ 1.26
IGHV1-3-201ENST00000390595 KIF21BO75037 1637 aa22.9■■□□□ 1.26
IGHV1-3-201ENST00000390595 EHMT2Q96KQ7 1210 aa22.89■■□□□ 1.25
IGHV1-3-201ENST00000390595 GOLGA3Q08378 1498 aa22.85■■□□□ 1.25
IGHV1-3-201ENST00000390595 CEP170Q5SW79 1584 aa22.84■■□□□ 1.25
IGHV1-3-201ENST00000390595 NUP160Q12769 1436 aa22.83■■□□□ 1.25
IGHV1-3-201ENST00000390595 UBTFP17480 764 aaKnown RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms