RNA–Protein interactions for RNA: ENST00000397980.3

PHACTR2-204, Transcript of phosphatase and actin regulator 2, humanhuman

TSL 3 BASIC

Gene PHACTR2, Length 745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR2-204ENST00000397980 NISCHQ9Y2I1 1504 aa34.16■■■■□ 3.06
PHACTR2-204ENST00000397980 CCDC180Q9P1Z9 1646 aa30.31■■■□□ 2.44
PHACTR2-204ENST00000397980 ABCC9O60706 1549 aa29.82■■■□□ 2.36
PHACTR2-204ENST00000397980 DCAF8L2P0C7V8 631 aa28.71■■■□□ 2.19
PHACTR2-204ENST00000397980 RB1CC1Q8TDY2 1594 aa28.59■■■□□ 2.17
PHACTR2-204ENST00000397980 NACADO15069 1562 aa28.55■■■□□ 2.16
PHACTR2-204ENST00000397980 ZCCHC6Q5VYS8 1495 aaKnown RBP28.46■■■□□ 2.15
PHACTR2-204ENST00000397980 MYO15BQ96JP2 1530 aa28.34■■■□□ 2.13
PHACTR2-204ENST00000397980 DCAF1Q9Y4B6 1507 aa28.22■■■□□ 2.11
PHACTR2-204ENST00000397980 PABPN1Q86U42 306 aaKnown RBP eCLIP27.91■■■□□ 2.06
PHACTR2-204ENST00000397980 UNC13AQ9UPW8 1703 aa27.89■■■□□ 2.05
PHACTR2-204ENST00000397980 SCRIBQ14160 1630 aa27.76■■■□□ 2.03
PHACTR2-204ENST00000397980 BICRAQ9NZM4 1560 aa27.72■■■□□ 2.03
PHACTR2-204ENST00000397980 SHROOM4Q9ULL8 1493 aa27.4■■□□□ 1.98
PHACTR2-204ENST00000397980 DNAJC5BQ9UF47 199 aa27.4■■□□□ 1.98
PHACTR2-204ENST00000397980 EIF4G1Q04637 1599 aaKnown RBP27.02■■□□□ 1.92
PHACTR2-204ENST00000397980 CC2D2AQ9P2K1 1620 aa26.92■■□□□ 1.9
PHACTR2-204ENST00000397980 CECR2Q9BXF3 1484 aa26.78■■□□□ 1.88
PHACTR2-204ENST00000397980 SMARCA4P51532 1647 aa26.5■■□□□ 1.83
PHACTR2-204ENST00000397980 BAZ1AQ9NRL2 1556 aaPredicted RBP26.48■■□□□ 1.83
PHACTR2-204ENST00000397980 ATAD2BQ9ULI0 1458 aa26.4■■□□□ 1.82
PHACTR2-204ENST00000397980 NCAPD3P42695 1498 aa26.36■■□□□ 1.81
PHACTR2-204ENST00000397980 MROH2BQ7Z745 1585 aa26.35■■□□□ 1.81
PHACTR2-204ENST00000397980 SMARCA2P51531 1590 aa26.34■■□□□ 1.81
PHACTR2-204ENST00000397980 PEG3Q9GZU2 1588 aa26.21■■□□□ 1.79
PHACTR2-204ENST00000397980 HMGXB3Q12766 1538 aa26.21■■□□□ 1.79
PHACTR2-204ENST00000397980 BAZ1BQ9UIG0 1483 aaKnown RBP26.19■■□□□ 1.78
PHACTR2-204ENST00000397980 WIZO95785 1651 aa26.05■■□□□ 1.76
PHACTR2-204ENST00000397980 RSF1Q96T23 1441 aaPredicted RBP26.05■■□□□ 1.76
PHACTR2-204ENST00000397980 NESP48681 1621 aa25.78■■□□□ 1.72
PHACTR2-204ENST00000397980 TOP2AP11388 1531 aaKnown RBP25.78■■□□□ 1.72
PHACTR2-204ENST00000397980 ERCC6Q03468 1493 aa25.72■■□□□ 1.71
PHACTR2-204ENST00000397980 LAMC3Q9Y6N6 1575 aa25.65■■□□□ 1.7
PHACTR2-204ENST00000397980 CADPSQ9ULU8 1353 aa25.63■■□□□ 1.69
PHACTR2-204ENST00000397980 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
PHACTR2-204ENST00000397980 CCDC88BA6NC98 1476 aa25.49■■□□□ 1.67
PHACTR2-204ENST00000397980 SUPT5HO00267 1087 aaKnown RBP25.48■■□□□ 1.67
PHACTR2-204ENST00000397980 CFTRP13569 1480 aa25.45■■□□□ 1.66
PHACTR2-204ENST00000397980 KIF21AQ7Z4S6 1674 aa25.41■■□□□ 1.66
PHACTR2-204ENST00000397980 CUX2O14529 1486 aa25.39■■□□□ 1.65
PHACTR2-204ENST00000397980 THOC2Q8NI27 1593 aaKnown RBP25.34■■□□□ 1.65
PHACTR2-204ENST00000397980 FANCD2Q9BXW9 1451 aa25.34■■□□□ 1.65
PHACTR2-204ENST00000397980 CEP164Q9UPV0 1460 aa25.3■■□□□ 1.64
PHACTR2-204ENST00000397980 MRC2Q9UBG0 1479 aa25.27■■□□□ 1.64
PHACTR2-204ENST00000397980 WDR62O43379 1518 aa25.16■■□□□ 1.62
PHACTR2-204ENST00000397980 PRDM2Q13029 1718 aa25.15■■□□□ 1.62
PHACTR2-204ENST00000397980 URB2Q14146 1524 aaKnown RBP25.07■■□□□ 1.6
PHACTR2-204ENST00000397980 TOPBP1Q92547 1522 aa24.92■■□□□ 1.58
PHACTR2-204ENST00000397980 ABCC8Q09428 1581 aa24.88■■□□□ 1.57
PHACTR2-204ENST00000397980 DNMBPQ6XZF7 1577 aa24.86■■□□□ 1.57
PHACTR2-204ENST00000397980 IFT140Q96RY7 1462 aa24.77■■□□□ 1.56
PHACTR2-204ENST00000397980 CUX1P39880 1505 aa24.72■■□□□ 1.55
PHACTR2-204ENST00000397980 POLA1P09884 1462 aaPredicted RBP24.7■■□□□ 1.55
PHACTR2-204ENST00000397980 ZNF608Q9ULD9 1512 aaPredicted RBP24.68■■□□□ 1.54
PHACTR2-204ENST00000397980 DNAJC5Q9H3Z4 198 aa24.67■■□□□ 1.54
PHACTR2-204ENST00000397980 FGD5Q6ZNL6 1462 aa24.66■■□□□ 1.54
PHACTR2-204ENST00000397980 RAD54L2Q9Y4B4 1467 aa24.64■■□□□ 1.53
PHACTR2-204ENST00000397980 SOGA1O94964 1423 aa24.63■■□□□ 1.53
PHACTR2-204ENST00000397980 TARBP1Q13395 1621 aaKnown RBP24.6■■□□□ 1.53
PHACTR2-204ENST00000397980 WRNQ14191 1432 aaPredicted RBP eCLIP24.58■■□□□ 1.53
PHACTR2-204ENST00000397980 AQRO60306 1485 aaKnown RBP eCLIP24.55■■□□□ 1.52
PHACTR2-204ENST00000397980 EIF4G3O43432 1585 aaKnown RBP24.54■■□□□ 1.52
PHACTR2-204ENST00000397980 TDRD9Q8NDG6 1382 aaKnown RBP24.52■■□□□ 1.52
PHACTR2-204ENST00000397980 SYNJ1O43426 1573 aa24.49■■□□□ 1.51
PHACTR2-204ENST00000397980 TOP2BQ02880 1626 aa24.47■■□□□ 1.51
PHACTR2-204ENST00000397980 BIVM-ERCC5R4GMW8 1640 aa24.44■■□□□ 1.5
PHACTR2-204ENST00000397980 ABCA10Q8WWZ4 1543 aa24.4■■□□□ 1.5
PHACTR2-204ENST00000397980 OSCARQ8IYS5 282 aa24.39■■□□□ 1.49
PHACTR2-204ENST00000397980 WDR97A6NE52 1622 aa24.38■■□□□ 1.49
PHACTR2-204ENST00000397980 GAPVD1Q14C86 1478 aa24.33■■□□□ 1.49
PHACTR2-204ENST00000397980 GRIN2BQ13224 1484 aa24.32■■□□□ 1.48
PHACTR2-204ENST00000397980 FBLN2P98095 1184 aa24.32■■□□□ 1.48
PHACTR2-204ENST00000397980 SNAPC4Q5SXM2 1469 aa24.32■■□□□ 1.48
PHACTR2-204ENST00000397980 ABCA5Q8WWZ7 1642 aa24.27■■□□□ 1.48
PHACTR2-204ENST00000397980 MAGI1Q96QZ7 1491 aaPredicted RBP24.25■■□□□ 1.47
PHACTR2-204ENST00000397980 CHMP7Q8WUX9 453 aaPredicted RBP24.22■■□□□ 1.47
PHACTR2-204ENST00000397980 PBRM1Q86U86 1689 aa24.21■■□□□ 1.47
PHACTR2-204ENST00000397980 CHD1O14646 1710 aa24.21■■□□□ 1.47
PHACTR2-204ENST00000397980 SYNJ2O15056 1496 aa24.17■■□□□ 1.46
PHACTR2-204ENST00000397980 ERICH3Q5RHP9 1530 aa24.09■■□□□ 1.45
PHACTR2-204ENST00000397980 KIF27Q86VH2 1401 aa24.07■■□□□ 1.44
PHACTR2-204ENST00000397980 ADAMTS12P58397 1594 aa24.07■■□□□ 1.44
PHACTR2-204ENST00000397980 FHAD1B1AJZ9 1412 aa24.05■■□□□ 1.44
PHACTR2-204ENST00000397980 TRIM41Q8WV44 630 aa24.03■■□□□ 1.44
PHACTR2-204ENST00000397980 GRIN2AQ12879 1464 aa24.01■■□□□ 1.43
PHACTR2-204ENST00000397980 IGF1RP08069 1367 aa23.97■■□□□ 1.43
PHACTR2-204ENST00000397980 CLASP1Q7Z460 1538 aa23.96■■□□□ 1.43
PHACTR2-204ENST00000397980 ARHGEF11O15085 1522 aa23.95■■□□□ 1.43
PHACTR2-204ENST00000397980 RIMBP3CA6NJZ7 1639 aa23.94■■□□□ 1.42
PHACTR2-204ENST00000397980 RIMBP3BA6NNM3 1639 aa23.94■■□□□ 1.42
PHACTR2-204ENST00000397980 RIMBP3Q9UFD9 1639 aa23.94■■□□□ 1.42
PHACTR2-204ENST00000397980 NUP160Q12769 1436 aa23.9■■□□□ 1.42
PHACTR2-204ENST00000397980 CEP170Q5SW79 1584 aa23.88■■□□□ 1.41
PHACTR2-204ENST00000397980 RUSC2Q8N2Y8 1516 aa23.85■■□□□ 1.41
PHACTR2-204ENST00000397980 CARMIL1Q5VZK9 1371 aa23.85■■□□□ 1.41
PHACTR2-204ENST00000397980 CUL7Q14999 1698 aa23.85■■□□□ 1.41
PHACTR2-204ENST00000397980 CYB5RLQ6IPT4 315 aa23.81■■□□□ 1.4
PHACTR2-204ENST00000397980 ARAP1Q96P48 1450 aa23.78■■□□□ 1.4
PHACTR2-204ENST00000397980 CHIC1Q5VXU3 224 aa23.71■■□□□ 1.39
PHACTR2-204ENST00000397980 JPH4Q96JJ6 628 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms