RNA–Protein interactions for RNA: ENST00000449439.1

AL139420.2-201, humanhuman

TSL 3 BASIC

Gene AL139420.2, Length 410 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139420.2-201ENST00000449439 NISCHQ9Y2I1 1504 aa34.49■■■■□ 3.11
AL139420.2-201ENST00000449439 CCDC180Q9P1Z9 1646 aa30.76■■■□□ 2.51
AL139420.2-201ENST00000449439 ABCC9O60706 1549 aa30.12■■■□□ 2.41
AL139420.2-201ENST00000449439 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
AL139420.2-201ENST00000449439 NACADO15069 1562 aa28.91■■■□□ 2.22
AL139420.2-201ENST00000449439 DCAF8L2P0C7V8 631 aa28.82■■■□□ 2.2
AL139420.2-201ENST00000449439 ZCCHC6Q5VYS8 1495 aaKnown RBP28.7■■■□□ 2.18
AL139420.2-201ENST00000449439 MYO15BQ96JP2 1530 aa28.69■■■□□ 2.18
AL139420.2-201ENST00000449439 DCAF1Q9Y4B6 1507 aa28.53■■■□□ 2.16
AL139420.2-201ENST00000449439 UNC13AQ9UPW8 1703 aa28.4■■■□□ 2.14
AL139420.2-201ENST00000449439 PABPN1Q86U42 306 aaKnown RBP eCLIP28.11■■■□□ 2.09
AL139420.2-201ENST00000449439 BICRAQ9NZM4 1560 aa28.09■■■□□ 2.09
AL139420.2-201ENST00000449439 SCRIBQ14160 1630 aa28.02■■■□□ 2.08
AL139420.2-201ENST00000449439 SHROOM4Q9ULL8 1493 aa27.77■■■□□ 2.04
AL139420.2-201ENST00000449439 DNAJC5BQ9UF47 199 aa27.72■■■□□ 2.03
AL139420.2-201ENST00000449439 EIF4G1Q04637 1599 aaKnown RBP27.35■■□□□ 1.97
AL139420.2-201ENST00000449439 CC2D2AQ9P2K1 1620 aa27.28■■□□□ 1.96
AL139420.2-201ENST00000449439 CECR2Q9BXF3 1484 aa27.07■■□□□ 1.92
AL139420.2-201ENST00000449439 SMARCA4P51532 1647 aa26.8■■□□□ 1.88
AL139420.2-201ENST00000449439 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
AL139420.2-201ENST00000449439 NCAPD3P42695 1498 aa26.65■■□□□ 1.86
AL139420.2-201ENST00000449439 ATAD2BQ9ULI0 1458 aa26.65■■□□□ 1.86
AL139420.2-201ENST00000449439 SMARCA2P51531 1590 aa26.63■■□□□ 1.85
AL139420.2-201ENST00000449439 MROH2BQ7Z745 1585 aa26.58■■□□□ 1.85
AL139420.2-201ENST00000449439 PEG3Q9GZU2 1588 aa26.54■■□□□ 1.84
AL139420.2-201ENST00000449439 HMGXB3Q12766 1538 aa26.53■■□□□ 1.84
AL139420.2-201ENST00000449439 BAZ1BQ9UIG0 1483 aaKnown RBP26.43■■□□□ 1.82
AL139420.2-201ENST00000449439 WIZO95785 1651 aa26.32■■□□□ 1.8
AL139420.2-201ENST00000449439 RSF1Q96T23 1441 aaPredicted RBP26.22■■□□□ 1.79
AL139420.2-201ENST00000449439 NESP48681 1621 aa26.04■■□□□ 1.76
AL139420.2-201ENST00000449439 TOP2AP11388 1531 aaKnown RBP26.01■■□□□ 1.75
AL139420.2-201ENST00000449439 LAMC3Q9Y6N6 1575 aa25.99■■□□□ 1.75
AL139420.2-201ENST00000449439 ERCC6Q03468 1493 aa25.97■■□□□ 1.75
AL139420.2-201ENST00000449439 CADPSQ9ULU8 1353 aa25.86■■□□□ 1.73
AL139420.2-201ENST00000449439 KIF21AQ7Z4S6 1674 aa25.8■■□□□ 1.72
AL139420.2-201ENST00000449439 PDS5BQ9NTI5 1447 aa25.79■■□□□ 1.72
AL139420.2-201ENST00000449439 CUX2O14529 1486 aa25.74■■□□□ 1.71
AL139420.2-201ENST00000449439 THOC2Q8NI27 1593 aaKnown RBP25.7■■□□□ 1.71
AL139420.2-201ENST00000449439 CCDC88BA6NC98 1476 aa25.69■■□□□ 1.7
AL139420.2-201ENST00000449439 CFTRP13569 1480 aa25.69■■□□□ 1.7
AL139420.2-201ENST00000449439 PRDM2Q13029 1718 aa25.6■■□□□ 1.69
AL139420.2-201ENST00000449439 FANCD2Q9BXW9 1451 aa25.58■■□□□ 1.69
AL139420.2-201ENST00000449439 CEP164Q9UPV0 1460 aa25.55■■□□□ 1.68
AL139420.2-201ENST00000449439 MRC2Q9UBG0 1479 aa25.53■■□□□ 1.68
AL139420.2-201ENST00000449439 SUPT5HO00267 1087 aaKnown RBP25.48■■□□□ 1.67
AL139420.2-201ENST00000449439 WDR62O43379 1518 aa25.47■■□□□ 1.67
AL139420.2-201ENST00000449439 URB2Q14146 1524 aaKnown RBP25.33■■□□□ 1.65
AL139420.2-201ENST00000449439 TOPBP1Q92547 1522 aa25.17■■□□□ 1.62
AL139420.2-201ENST00000449439 ABCC8Q09428 1581 aa25.16■■□□□ 1.62
AL139420.2-201ENST00000449439 DNMBPQ6XZF7 1577 aa25.14■■□□□ 1.62
AL139420.2-201ENST00000449439 DNAJC5Q9H3Z4 198 aa25.04■■□□□ 1.6
AL139420.2-201ENST00000449439 IFT140Q96RY7 1462 aa25.02■■□□□ 1.6
AL139420.2-201ENST00000449439 CUX1P39880 1505 aa24.94■■□□□ 1.58
AL139420.2-201ENST00000449439 POLA1P09884 1462 aaPredicted RBP24.94■■□□□ 1.58
AL139420.2-201ENST00000449439 TARBP1Q13395 1621 aaKnown RBP24.92■■□□□ 1.58
AL139420.2-201ENST00000449439 ZNF608Q9ULD9 1512 aaPredicted RBP24.91■■□□□ 1.58
AL139420.2-201ENST00000449439 FGD5Q6ZNL6 1462 aa24.87■■□□□ 1.57
AL139420.2-201ENST00000449439 EIF4G3O43432 1585 aaKnown RBP24.84■■□□□ 1.57
AL139420.2-201ENST00000449439 SOGA1O94964 1423 aa24.83■■□□□ 1.57
AL139420.2-201ENST00000449439 RAD54L2Q9Y4B4 1467 aa24.83■■□□□ 1.56
AL139420.2-201ENST00000449439 AQRO60306 1485 aaKnown RBP eCLIP24.76■■□□□ 1.55
AL139420.2-201ENST00000449439 BIVM-ERCC5R4GMW8 1640 aa24.74■■□□□ 1.55
AL139420.2-201ENST00000449439 WRNQ14191 1432 aaPredicted RBP eCLIP24.73■■□□□ 1.55
AL139420.2-201ENST00000449439 WDR97A6NE52 1622 aa24.72■■□□□ 1.55
AL139420.2-201ENST00000449439 TOP2BQ02880 1626 aa24.72■■□□□ 1.55
AL139420.2-201ENST00000449439 SYNJ1O43426 1573 aa24.7■■□□□ 1.54
AL139420.2-201ENST00000449439 TDRD9Q8NDG6 1382 aaKnown RBP24.69■■□□□ 1.54
AL139420.2-201ENST00000449439 OSCARQ8IYS5 282 aa24.64■■□□□ 1.54
AL139420.2-201ENST00000449439 ABCA10Q8WWZ4 1543 aa24.62■■□□□ 1.53
AL139420.2-201ENST00000449439 CHD1O14646 1710 aa24.59■■□□□ 1.53
AL139420.2-201ENST00000449439 PBRM1Q86U86 1689 aa24.56■■□□□ 1.52
AL139420.2-201ENST00000449439 ABCA5Q8WWZ7 1642 aa24.56■■□□□ 1.52
AL139420.2-201ENST00000449439 GRIN2BQ13224 1484 aa24.55■■□□□ 1.52
AL139420.2-201ENST00000449439 GAPVD1Q14C86 1478 aa24.55■■□□□ 1.52
AL139420.2-201ENST00000449439 SNAPC4Q5SXM2 1469 aa24.53■■□□□ 1.52
AL139420.2-201ENST00000449439 MAGI1Q96QZ7 1491 aaPredicted RBP24.51■■□□□ 1.51
AL139420.2-201ENST00000449439 FBLN2P98095 1184 aa24.47■■□□□ 1.51
AL139420.2-201ENST00000449439 SYNJ2O15056 1496 aa24.4■■□□□ 1.5
AL139420.2-201ENST00000449439 CHMP7Q8WUX9 453 aaPredicted RBP24.39■■□□□ 1.49
AL139420.2-201ENST00000449439 ERICH3Q5RHP9 1530 aa24.33■■□□□ 1.49
AL139420.2-201ENST00000449439 ADAMTS12P58397 1594 aa24.32■■□□□ 1.48
AL139420.2-201ENST00000449439 RIMBP3CA6NJZ7 1639 aa24.3■■□□□ 1.48
AL139420.2-201ENST00000449439 RIMBP3BA6NNM3 1639 aa24.3■■□□□ 1.48
AL139420.2-201ENST00000449439 RIMBP3Q9UFD9 1639 aa24.3■■□□□ 1.48
AL139420.2-201ENST00000449439 CLASP1Q7Z460 1538 aa24.27■■□□□ 1.48
AL139420.2-201ENST00000449439 ARHGEF11O15085 1522 aa24.26■■□□□ 1.47
AL139420.2-201ENST00000449439 FHAD1B1AJZ9 1412 aa24.26■■□□□ 1.47
AL139420.2-201ENST00000449439 GRIN2AQ12879 1464 aa24.24■■□□□ 1.47
AL139420.2-201ENST00000449439 KIF27Q86VH2 1401 aa24.22■■□□□ 1.47
AL139420.2-201ENST00000449439 TRIM41Q8WV44 630 aa24.17■■□□□ 1.46
AL139420.2-201ENST00000449439 CEP170Q5SW79 1584 aa24.14■■□□□ 1.45
AL139420.2-201ENST00000449439 NUP160Q12769 1436 aa24.13■■□□□ 1.45
AL139420.2-201ENST00000449439 IGF1RP08069 1367 aa24.13■■□□□ 1.45
AL139420.2-201ENST00000449439 CUL7Q14999 1698 aa24.12■■□□□ 1.45
AL139420.2-201ENST00000449439 ARAP1Q96P48 1450 aa24.05■■□□□ 1.44
AL139420.2-201ENST00000449439 CYB5RLQ6IPT4 315 aa24.02■■□□□ 1.44
AL139420.2-201ENST00000449439 SHROOM2Q13796 1616 aa24■■□□□ 1.43
AL139420.2-201ENST00000449439 CARMIL1Q5VZK9 1371 aa23.99■■□□□ 1.43
AL139420.2-201ENST00000449439 RUSC2Q8N2Y8 1516 aa23.99■■□□□ 1.43
AL139420.2-201ENST00000449439 ERCC6L2Q5T890 1561 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms