Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 EMC4-208ENST00000559078 599 ntTSL 3 BASIC13.54□□□□□ -0.24
CSNK1EP49674 AL590235.1-201ENST00000564650 861 ntBASIC13.54□□□□□ -0.24
CSNK1EP49674 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC13.54□□□□□ -0.24
CSNK1EP49674 KF455155.1-201ENST00000604493 303 ntBASIC13.54□□□□□ -0.24
CSNK1EP49674 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC13.54□□□□□ -0.24
CSNK1EP49674 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC13.54□□□□□ -0.24
CSNK1EP49674 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1EP49674 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC13.54□□□□□ -0.24
CSNK1EP49674 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1EP49674 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CSNK1EP49674 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1EP49674 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1EP49674 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.54□□□□□ -0.24
CSNK1EP49674 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1EP49674 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.54□□□□□ -0.24
CSNK1EP49674 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.54□□□□□ -0.24
CSNK1EP49674 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1EP49674 AC061965.1-201ENST00000560524 1465 ntBASIC13.54□□□□□ -0.24
CSNK1EP49674 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CSNK1EP49674 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
CSNK1EP49674 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1EP49674 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.54□□□□□ -0.24
CSNK1EP49674 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CSNK1EP49674 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CSNK1EP49674 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CSNK1EP49674 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.53□□□□□ -0.24
CSNK1EP49674 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.53□□□□□ -0.24
CSNK1EP49674 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CSNK1EP49674 CICP16-201ENST00000502609 2813 ntBASIC13.53□□□□□ -0.24
CSNK1EP49674 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC13.53□□□□□ -0.24
CSNK1EP49674 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC13.53□□□□□ -0.24
CSNK1EP49674 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.53□□□□□ -0.24
CSNK1EP49674 KRT19P4-201ENST00000443208 943 ntBASIC13.53□□□□□ -0.24
CSNK1EP49674 VDAC1P11-201ENST00000458323 852 ntBASIC13.53□□□□□ -0.24
CSNK1EP49674 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC13.53□□□□□ -0.24
CSNK1EP49674 AC023906.1-201ENST00000486386 453 ntBASIC13.53□□□□□ -0.24
CSNK1EP49674 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC13.53□□□□□ -0.24
CSNK1EP49674 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC13.53□□□□□ -0.24
CSNK1EP49674 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.53□□□□□ -0.24
CSNK1EP49674 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC13.53□□□□□ -0.24
CSNK1EP49674 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC13.53□□□□□ -0.24
CSNK1EP49674 AC004801.1-201ENST00000549557 360 ntBASIC13.53□□□□□ -0.24
CSNK1EP49674 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC13.53□□□□□ -0.24
CSNK1EP49674 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CSNK1EP49674 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC13.53□□□□□ -0.24
CSNK1EP49674 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC13.53□□□□□ -0.24
CSNK1EP49674 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CSNK1EP49674 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.53□□□□□ -0.24
CSNK1EP49674 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CSNK1EP49674 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CSNK1EP49674 AC093462.1-201ENST00000621167 1683 ntBASIC13.53□□□□□ -0.24
CSNK1EP49674 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CSNK1EP49674 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
CSNK1EP49674 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1EP49674 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.52□□□□□ -0.24
CSNK1EP49674 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CSNK1EP49674 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CSNK1EP49674 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CSNK1EP49674 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CSNK1EP49674 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.52□□□□□ -0.24
CSNK1EP49674 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CSNK1EP49674 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CSNK1EP49674 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CSNK1EP49674 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CSNK1EP49674 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.52□□□□□ -0.24
CSNK1EP49674 AC106881.1-201ENST00000605849 3329 ntBASIC13.52□□□□□ -0.24
CSNK1EP49674 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.52□□□□□ -0.25
CSNK1EP49674 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 HDGF-202ENST00000368206 960 ntTSL 5 BASIC13.52□□□□□ -0.25
CSNK1EP49674 HLA-DMA-202ENST00000395303 1007 ntBASIC13.52□□□□□ -0.25
CSNK1EP49674 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC13.52□□□□□ -0.25
CSNK1EP49674 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1EP49674 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC13.52□□□□□ -0.25
CSNK1EP49674 AL137244.1-201ENST00000422931 865 ntBASIC13.52□□□□□ -0.25
CSNK1EP49674 AC007279.1-201ENST00000448547 837 ntBASIC13.52□□□□□ -0.25
CSNK1EP49674 AL136084.1-201ENST00000449172 318 ntBASIC13.52□□□□□ -0.25
CSNK1EP49674 BCRP4-201ENST00000506079 804 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms