RNA–Protein interactions for RNA: ENST00000308108.8

CCNE2-201, Transcript of cyclin E2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCNE2, Length 2,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE2-201ENST00000308108 NISCHQ9Y2I1 1504 aa32.5■■■□□ 2.79
CCNE2-201ENST00000308108 CCDC180Q9P1Z9 1646 aa28.54■■■□□ 2.16
CCNE2-201ENST00000308108 ABCC9O60706 1549 aa27.27■■□□□ 1.96
CCNE2-201ENST00000308108 ZCCHC6Q5VYS8 1495 aaKnown RBP27.22■■□□□ 1.95
CCNE2-201ENST00000308108 DCAF1Q9Y4B6 1507 aa26.92■■□□□ 1.9
CCNE2-201ENST00000308108 DCAF8L2P0C7V8 631 aa26.79■■□□□ 1.88
CCNE2-201ENST00000308108 MYO15BQ96JP2 1530 aa26.78■■□□□ 1.88
CCNE2-201ENST00000308108 NACADO15069 1562 aa26.67■■□□□ 1.86
CCNE2-201ENST00000308108 RB1CC1Q8TDY2 1594 aa26.51■■□□□ 1.83
CCNE2-201ENST00000308108 SCRIBQ14160 1630 aa26.1■■□□□ 1.77
CCNE2-201ENST00000308108 SHROOM4Q9ULL8 1493 aa26.06■■□□□ 1.76
CCNE2-201ENST00000308108 UNC13AQ9UPW8 1703 aa25.98■■□□□ 1.75
CCNE2-201ENST00000308108 BICRAQ9NZM4 1560 aa25.78■■□□□ 1.72
CCNE2-201ENST00000308108 PABPN1Q86U42 306 aaKnown RBP eCLIP25.62■■□□□ 1.69
CCNE2-201ENST00000308108 CECR2Q9BXF3 1484 aa25.27■■□□□ 1.64
CCNE2-201ENST00000308108 BAZ1AQ9NRL2 1556 aaPredicted RBP25.1■■□□□ 1.61
CCNE2-201ENST00000308108 MROH2BQ7Z745 1585 aa25.08■■□□□ 1.61
CCNE2-201ENST00000308108 SMARCA4P51532 1647 aa25.05■■□□□ 1.6
CCNE2-201ENST00000308108 RSF1Q96T23 1441 aaPredicted RBP25.04■■□□□ 1.6
CCNE2-201ENST00000308108 EIF4G1Q04637 1599 aaKnown RBP24.99■■□□□ 1.59
CCNE2-201ENST00000308108 SUPT5HO00267 1087 aaKnown RBP24.86■■□□□ 1.57
CCNE2-201ENST00000308108 PEG3Q9GZU2 1588 aa24.83■■□□□ 1.57
CCNE2-201ENST00000308108 WIZO95785 1651 aa24.83■■□□□ 1.57
CCNE2-201ENST00000308108 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
CCNE2-201ENST00000308108 CC2D2AQ9P2K1 1620 aa24.71■■□□□ 1.55
CCNE2-201ENST00000308108 SMARCA2P51531 1590 aa24.71■■□□□ 1.55
CCNE2-201ENST00000308108 NCAPD3P42695 1498 aa24.65■■□□□ 1.54
CCNE2-201ENST00000308108 TOP2AP11388 1531 aaKnown RBP24.58■■□□□ 1.53
CCNE2-201ENST00000308108 HMGXB3Q12766 1538 aa24.55■■□□□ 1.52
CCNE2-201ENST00000308108 BAZ1BQ9UIG0 1483 aaKnown RBP24.54■■□□□ 1.52
CCNE2-201ENST00000308108 DNAJC5BQ9UF47 199 aa24.49■■□□□ 1.51
CCNE2-201ENST00000308108 CCDC88BA6NC98 1476 aa24.32■■□□□ 1.48
CCNE2-201ENST00000308108 CFTRP13569 1480 aa23.97■■□□□ 1.43
CCNE2-201ENST00000308108 CADPSQ9ULU8 1353 aa23.94■■□□□ 1.42
CCNE2-201ENST00000308108 NESP48681 1621 aa23.84■■□□□ 1.41
CCNE2-201ENST00000308108 LAMC3Q9Y6N6 1575 aa23.84■■□□□ 1.41
CCNE2-201ENST00000308108 PRDM2Q13029 1718 aa23.79■■□□□ 1.4
CCNE2-201ENST00000308108 CHIC1Q5VXU3 224 aa23.68■■□□□ 1.38
CCNE2-201ENST00000308108 FANCD2Q9BXW9 1451 aa23.66■■□□□ 1.38
CCNE2-201ENST00000308108 PDS5BQ9NTI5 1447 aa23.64■■□□□ 1.37
CCNE2-201ENST00000308108 ABCC8Q09428 1581 aa23.64■■□□□ 1.37
CCNE2-201ENST00000308108 KIF21AQ7Z4S6 1674 aa23.55■■□□□ 1.36
CCNE2-201ENST00000308108 WRNQ14191 1432 aaPredicted RBP eCLIP23.54■■□□□ 1.36
CCNE2-201ENST00000308108 CEP164Q9UPV0 1460 aa23.53■■□□□ 1.36
CCNE2-201ENST00000308108 SYNJ1O43426 1573 aa23.48■■□□□ 1.35
CCNE2-201ENST00000308108 CUX1P39880 1505 aa23.47■■□□□ 1.35
CCNE2-201ENST00000308108 TRIM41Q8WV44 630 aa23.44■■□□□ 1.34
CCNE2-201ENST00000308108 TOP2BQ02880 1626 aa23.44■■□□□ 1.34
CCNE2-201ENST00000308108 BIVM-ERCC5R4GMW8 1640 aa23.43■■□□□ 1.34
CCNE2-201ENST00000308108 URB2Q14146 1524 aaKnown RBP23.41■■□□□ 1.34
CCNE2-201ENST00000308108 ERCC6Q03468 1493 aa23.39■■□□□ 1.33
CCNE2-201ENST00000308108 DNMBPQ6XZF7 1577 aa23.38■■□□□ 1.33
CCNE2-201ENST00000308108 TOPBP1Q92547 1522 aa23.37■■□□□ 1.33
CCNE2-201ENST00000308108 MRC2Q9UBG0 1479 aa23.36■■□□□ 1.33
CCNE2-201ENST00000308108 THOC2Q8NI27 1593 aaKnown RBP23.32■■□□□ 1.32
CCNE2-201ENST00000308108 WDR62O43379 1518 aa23.3■■□□□ 1.32
CCNE2-201ENST00000308108 FGD5Q6ZNL6 1462 aa23.26■■□□□ 1.31
CCNE2-201ENST00000308108 POLA1P09884 1462 aaPredicted RBP23.23■■□□□ 1.31
CCNE2-201ENST00000308108 CUX2O14529 1486 aa23.13■■□□□ 1.29
CCNE2-201ENST00000308108 SOGA1O94964 1423 aa23.13■■□□□ 1.29
CCNE2-201ENST00000308108 RAD54L2Q9Y4B4 1467 aa23.12■■□□□ 1.29
CCNE2-201ENST00000308108 TARBP1Q13395 1621 aaKnown RBP23.09■■□□□ 1.29
CCNE2-201ENST00000308108 RUSC2Q8N2Y8 1516 aa23.08■■□□□ 1.28
CCNE2-201ENST00000308108 ABCA10Q8WWZ4 1543 aa23.08■■□□□ 1.28
CCNE2-201ENST00000308108 WDR97A6NE52 1622 aa23.05■■□□□ 1.28
CCNE2-201ENST00000308108 IFT140Q96RY7 1462 aa23.02■■□□□ 1.28
CCNE2-201ENST00000308108 EEA1Q15075 1411 aa23■■□□□ 1.27
CCNE2-201ENST00000308108 KIF27Q86VH2 1401 aa22.98■■□□□ 1.27
CCNE2-201ENST00000308108 FAM9AQ8IZU1 332 aaPredicted RBP22.95■■□□□ 1.26
CCNE2-201ENST00000308108 ABCA5Q8WWZ7 1642 aa22.93■■□□□ 1.26
CCNE2-201ENST00000308108 TDRD9Q8NDG6 1382 aaKnown RBP22.92■■□□□ 1.26
CCNE2-201ENST00000308108 ZNF608Q9ULD9 1512 aaPredicted RBP22.91■■□□□ 1.26
CCNE2-201ENST00000308108 CSRNP3Q8WYN3 585 aa22.89■■□□□ 1.26
CCNE2-201ENST00000308108 IGF1RP08069 1367 aa22.86■■□□□ 1.25
CCNE2-201ENST00000308108 GAPVD1Q14C86 1478 aa22.86■■□□□ 1.25
CCNE2-201ENST00000308108 AQRO60306 1485 aaKnown RBP eCLIP22.86■■□□□ 1.25
CCNE2-201ENST00000308108 EIF4G3O43432 1585 aaKnown RBP22.82■■□□□ 1.24
CCNE2-201ENST00000308108 ERICH3Q5RHP9 1530 aa22.8■■□□□ 1.24
CCNE2-201ENST00000308108 PRXQ9BXM0 1461 aa22.78■■□□□ 1.24
CCNE2-201ENST00000308108 PBRM1Q86U86 1689 aa22.76■■□□□ 1.23
CCNE2-201ENST00000308108 GRIN2BQ13224 1484 aa22.75■■□□□ 1.23
CCNE2-201ENST00000308108 KIF21BO75037 1637 aa22.73■■□□□ 1.23
CCNE2-201ENST00000308108 LOC105371045A0A1W2PR82 267 aa22.72■■□□□ 1.23
CCNE2-201ENST00000308108 CARMIL1Q5VZK9 1371 aa22.7■■□□□ 1.22
CCNE2-201ENST00000308108 CUL7Q14999 1698 aa22.7■■□□□ 1.22
CCNE2-201ENST00000308108 RAPGEF2Q9Y4G8 1499 aa22.67■■□□□ 1.22
CCNE2-201ENST00000308108 SNAPC4Q5SXM2 1469 aa22.64■■□□□ 1.21
CCNE2-201ENST00000308108 GOLGA3Q08378 1498 aa22.63■■□□□ 1.21
CCNE2-201ENST00000308108 ADAMTS12P58397 1594 aa22.63■■□□□ 1.21
CCNE2-201ENST00000308108 MAGI1Q96QZ7 1491 aaPredicted RBP22.62■■□□□ 1.21
CCNE2-201ENST00000308108 FHAD1B1AJZ9 1412 aa22.62■■□□□ 1.21
CCNE2-201ENST00000308108 EHMT2Q96KQ7 1210 aa22.58■■□□□ 1.21
CCNE2-201ENST00000308108 SYNJ2O15056 1496 aa22.53■■□□□ 1.2
CCNE2-201ENST00000308108 TNIKQ9UKE5 1360 aa22.51■■□□□ 1.19
CCNE2-201ENST00000308108 GRIN2AQ12879 1464 aa22.48■■□□□ 1.19
CCNE2-201ENST00000308108 UBTFP17480 764 aaKnown RBP22.48■■□□□ 1.19
CCNE2-201ENST00000308108 CHMP7Q8WUX9 453 aaPredicted RBP22.44■■□□□ 1.18
CCNE2-201ENST00000308108 CHD1O14646 1710 aa22.38■■□□□ 1.17
CCNE2-201ENST00000308108 NUP160Q12769 1436 aa22.37■■□□□ 1.17
CCNE2-201ENST00000308108 CTTNBP2Q8WZ74 1663 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms