RNA–Protein interactions for RNA: ENST00000555643.1

AL139316.1-201, humanhuman

TSL 3 BASIC

Gene AL139316.1, Length 568 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139316.1-201ENST00000555643 NISCHQ9Y2I1 1504 aa32.49■■■□□ 2.79
AL139316.1-201ENST00000555643 AEBP2Q6ZN18 517 aaPredicted RBP29.34■■■□□ 2.29
AL139316.1-201ENST00000555643 CCDC180Q9P1Z9 1646 aa28.89■■■□□ 2.22
AL139316.1-201ENST00000555643 ABCC9O60706 1549 aa28.06■■■□□ 2.08
AL139316.1-201ENST00000555643 CHIC1Q5VXU3 224 aa27.75■■■□□ 2.03
AL139316.1-201ENST00000555643 NACADO15069 1562 aa27.11■■□□□ 1.93
AL139316.1-201ENST00000555643 RB1CC1Q8TDY2 1594 aa27.11■■□□□ 1.93
AL139316.1-201ENST00000555643 ZCCHC6Q5VYS8 1495 aaKnown RBP27.09■■□□□ 1.93
AL139316.1-201ENST00000555643 DCAF8L2P0C7V8 631 aa27.04■■□□□ 1.92
AL139316.1-201ENST00000555643 MYO15BQ96JP2 1530 aa27■■□□□ 1.91
AL139316.1-201ENST00000555643 DCAF1Q9Y4B6 1507 aa26.92■■□□□ 1.9
AL139316.1-201ENST00000555643 UNC13AQ9UPW8 1703 aa26.52■■□□□ 1.84
AL139316.1-201ENST00000555643 SCRIBQ14160 1630 aa26.31■■□□□ 1.8
AL139316.1-201ENST00000555643 BICRAQ9NZM4 1560 aa26.26■■□□□ 1.79
AL139316.1-201ENST00000555643 PABPN1Q86U42 306 aaKnown RBP eCLIP26.21■■□□□ 1.79
AL139316.1-201ENST00000555643 SHROOM4Q9ULL8 1493 aa26.04■■□□□ 1.76
AL139316.1-201ENST00000555643 DNAJC5BQ9UF47 199 aa25.6■■□□□ 1.69
AL139316.1-201ENST00000555643 EIF4G1Q04637 1599 aaKnown RBP25.56■■□□□ 1.68
AL139316.1-201ENST00000555643 CC2D2AQ9P2K1 1620 aa25.43■■□□□ 1.66
AL139316.1-201ENST00000555643 CECR2Q9BXF3 1484 aa25.26■■□□□ 1.63
AL139316.1-201ENST00000555643 SMARCA4P51532 1647 aa25.2■■□□□ 1.62
AL139316.1-201ENST00000555643 BAZ1AQ9NRL2 1556 aaPredicted RBP25.19■■□□□ 1.62
AL139316.1-201ENST00000555643 SENP3Q9H4L4 574 aaPredicted RBP25.15■■□□□ 1.62
AL139316.1-201ENST00000555643 SMARCA2P51531 1590 aa25.02■■□□□ 1.6
AL139316.1-201ENST00000555643 MROH2BQ7Z745 1585 aa25.02■■□□□ 1.6
AL139316.1-201ENST00000555643 ATAD2BQ9ULI0 1458 aa25.01■■□□□ 1.59
AL139316.1-201ENST00000555643 NCAPD3P42695 1498 aa24.98■■□□□ 1.59
AL139316.1-201ENST00000555643 PEG3Q9GZU2 1588 aa24.97■■□□□ 1.59
AL139316.1-201ENST00000555643 HMGXB3Q12766 1538 aa24.9■■□□□ 1.58
AL139316.1-201ENST00000555643 BAZ1BQ9UIG0 1483 aaKnown RBP24.82■■□□□ 1.56
AL139316.1-201ENST00000555643 WIZO95785 1651 aa24.78■■□□□ 1.56
AL139316.1-201ENST00000555643 RSF1Q96T23 1441 aaPredicted RBP24.78■■□□□ 1.56
AL139316.1-201ENST00000555643 PHF23Q9BUL5 403 aaPredicted RBP24.77■■□□□ 1.56
AL139316.1-201ENST00000555643 TOP2AP11388 1531 aaKnown RBP24.53■■□□□ 1.52
AL139316.1-201ENST00000555643 LAMC3Q9Y6N6 1575 aa24.34■■□□□ 1.49
AL139316.1-201ENST00000555643 NESP48681 1621 aa24.32■■□□□ 1.48
AL139316.1-201ENST00000555643 CADPSQ9ULU8 1353 aa24.25■■□□□ 1.47
AL139316.1-201ENST00000555643 CCDC88BA6NC98 1476 aa24.22■■□□□ 1.47
AL139316.1-201ENST00000555643 SUPT5HO00267 1087 aaKnown RBP24.21■■□□□ 1.47
AL139316.1-201ENST00000555643 ERCC6Q03468 1493 aa24.2■■□□□ 1.47
AL139316.1-201ENST00000555643 CFTRP13569 1480 aa24.15■■□□□ 1.46
AL139316.1-201ENST00000555643 PDS5BQ9NTI5 1447 aa24.15■■□□□ 1.46
AL139316.1-201ENST00000555643 KIF21AQ7Z4S6 1674 aa24.1■■□□□ 1.45
AL139316.1-201ENST00000555643 PRDM2Q13029 1718 aa24.05■■□□□ 1.44
AL139316.1-201ENST00000555643 FANCD2Q9BXW9 1451 aa23.98■■□□□ 1.43
AL139316.1-201ENST00000555643 THOC2Q8NI27 1593 aaKnown RBP23.97■■□□□ 1.43
AL139316.1-201ENST00000555643 CEP164Q9UPV0 1460 aa23.95■■□□□ 1.42
AL139316.1-201ENST00000555643 CUX2O14529 1486 aa23.93■■□□□ 1.42
AL139316.1-201ENST00000555643 MRC2Q9UBG0 1479 aa23.88■■□□□ 1.41
AL139316.1-201ENST00000555643 WDR62O43379 1518 aa23.81■■□□□ 1.4
AL139316.1-201ENST00000555643 URB2Q14146 1524 aaKnown RBP23.72■■□□□ 1.39
AL139316.1-201ENST00000555643 ABCC8Q09428 1581 aa23.65■■□□□ 1.38
AL139316.1-201ENST00000555643 DNMBPQ6XZF7 1577 aa23.61■■□□□ 1.37
AL139316.1-201ENST00000555643 TOPBP1Q92547 1522 aa23.61■■□□□ 1.37
AL139316.1-201ENST00000555643 CUX1P39880 1505 aa23.47■■□□□ 1.35
AL139316.1-201ENST00000555643 IFT140Q96RY7 1462 aa23.43■■□□□ 1.34
AL139316.1-201ENST00000555643 POLA1P09884 1462 aaPredicted RBP23.42■■□□□ 1.34
AL139316.1-201ENST00000555643 FOXD1Q16676 465 aa23.4■■□□□ 1.34
AL139316.1-201ENST00000555643 FGD5Q6ZNL6 1462 aa23.37■■□□□ 1.33
AL139316.1-201ENST00000555643 WRNQ14191 1432 aaPredicted RBP eCLIP23.37■■□□□ 1.33
AL139316.1-201ENST00000555643 TARBP1Q13395 1621 aaKnown RBP23.37■■□□□ 1.33
AL139316.1-201ENST00000555643 BIVM-ERCC5R4GMW8 1640 aa23.35■■□□□ 1.33
AL139316.1-201ENST00000555643 TOP2BQ02880 1626 aa23.33■■□□□ 1.33
AL139316.1-201ENST00000555643 SOGA1O94964 1423 aa23.32■■□□□ 1.32
AL139316.1-201ENST00000555643 SYNJ1O43426 1573 aa23.31■■□□□ 1.32
AL139316.1-201ENST00000555643 ZNF608Q9ULD9 1512 aaPredicted RBP23.29■■□□□ 1.32
AL139316.1-201ENST00000555643 RAD54L2Q9Y4B4 1467 aa23.29■■□□□ 1.32
AL139316.1-201ENST00000555643 EIF4G3O43432 1585 aaKnown RBP23.26■■□□□ 1.31
AL139316.1-201ENST00000555643 WDR97A6NE52 1622 aa23.23■■□□□ 1.31
AL139316.1-201ENST00000555643 AQRO60306 1485 aaKnown RBP eCLIP23.17■■□□□ 1.3
AL139316.1-201ENST00000555643 ABCA10Q8WWZ4 1543 aa23.17■■□□□ 1.3
AL139316.1-201ENST00000555643 TDRD9Q8NDG6 1382 aaKnown RBP23.14■■□□□ 1.3
AL139316.1-201ENST00000555643 ABCA5Q8WWZ7 1642 aa23.08■■□□□ 1.29
AL139316.1-201ENST00000555643 GAPVD1Q14C86 1478 aa23.06■■□□□ 1.28
AL139316.1-201ENST00000555643 PBRM1Q86U86 1689 aa23.05■■□□□ 1.28
AL139316.1-201ENST00000555643 GRIN2BQ13224 1484 aa23.05■■□□□ 1.28
AL139316.1-201ENST00000555643 DNAJC5Q9H3Z4 198 aa23■■□□□ 1.27
AL139316.1-201ENST00000555643 MAGI1Q96QZ7 1491 aaPredicted RBP22.98■■□□□ 1.27
AL139316.1-201ENST00000555643 SNAPC4Q5SXM2 1469 aa22.98■■□□□ 1.27
AL139316.1-201ENST00000555643 CHD1O14646 1710 aa22.95■■□□□ 1.26
AL139316.1-201ENST00000555643 OSCARQ8IYS5 282 aa22.93■■□□□ 1.26
AL139316.1-201ENST00000555643 ERICH3Q5RHP9 1530 aa22.92■■□□□ 1.26
AL139316.1-201ENST00000555643 TRIM41Q8WV44 630 aa22.89■■□□□ 1.25
AL139316.1-201ENST00000555643 SYNJ2O15056 1496 aa22.89■■□□□ 1.25
AL139316.1-201ENST00000555643 KIF27Q86VH2 1401 aa22.88■■□□□ 1.25
AL139316.1-201ENST00000555643 FBLN2P98095 1184 aa22.87■■□□□ 1.25
AL139316.1-201ENST00000555643 CHMP7Q8WUX9 453 aaPredicted RBP22.85■■□□□ 1.25
AL139316.1-201ENST00000555643 ADAMTS12P58397 1594 aa22.84■■□□□ 1.25
AL139316.1-201ENST00000555643 FHAD1B1AJZ9 1412 aa22.8■■□□□ 1.24
AL139316.1-201ENST00000555643 CUL7Q14999 1698 aa22.75■■□□□ 1.23
AL139316.1-201ENST00000555643 GRIN2AQ12879 1464 aa22.75■■□□□ 1.23
AL139316.1-201ENST00000555643 IGF1RP08069 1367 aa22.75■■□□□ 1.23
AL139316.1-201ENST00000555643 CLASP1Q7Z460 1538 aa22.67■■□□□ 1.22
AL139316.1-201ENST00000555643 RUSC2Q8N2Y8 1516 aa22.67■■□□□ 1.22
AL139316.1-201ENST00000555643 NUP160Q12769 1436 aa22.64■■□□□ 1.21
AL139316.1-201ENST00000555643 CEP170Q5SW79 1584 aa22.63■■□□□ 1.21
AL139316.1-201ENST00000555643 CARMIL1Q5VZK9 1371 aa22.63■■□□□ 1.21
AL139316.1-201ENST00000555643 RIMBP3CA6NJZ7 1639 aa22.57■■□□□ 1.2
AL139316.1-201ENST00000555643 RIMBP3BA6NNM3 1639 aa22.57■■□□□ 1.2
AL139316.1-201ENST00000555643 RIMBP3Q9UFD9 1639 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 186.8 ms