Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PCDH17O14917 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.32■■□□□ 1
PCDH17O14917 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH17O14917 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH17O14917 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.32■■□□□ 1
PCDH17O14917 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDH17O14917 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.32■■□□□ 1
PCDH17O14917 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH17O14917 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH17O14917 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH17O14917 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.31■■□□□ 1
PCDH17O14917 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH17O14917 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.31■■□□□ 1
PCDH17O14917 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDH17O14917 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDH17O14917 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.31■■□□□ 1
PCDH17O14917 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.31■■□□□ 1
PCDH17O14917 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.31■■□□□ 1
PCDH17O14917 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH17O14917 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDH17O14917 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.31■■□□□ 1
PCDH17O14917 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.3■■□□□ 1
PCDH17O14917 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDH17O14917 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH17O14917 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.3■■□□□ 1
PCDH17O14917 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.3■■□□□ 1
PCDH17O14917 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.3■■□□□ 1
PCDH17O14917 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDH17O14917 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH17O14917 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDH17O14917 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH17O14917 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.3■■□□□ 1
PCDH17O14917 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH17O14917 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH17O14917 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PCDH17O14917 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH17O14917 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PCDH17O14917 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PCDH17O14917 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PCDH17O14917 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDH17O14917 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.29■■□□□ 1
PCDH17O14917 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.29■■□□□ 1
PCDH17O14917 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH17O14917 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH17O14917 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDH17O14917 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH17O14917 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.29■■□□□ 1
PCDH17O14917 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH17O14917 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.28■■□□□ 1
PCDH17O14917 AC096631.2-201ENST00000436136 790 ntBASIC21.28■■□□□ 1
PCDH17O14917 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH17O14917 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH17O14917 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.28■■□□□ 1
PCDH17O14917 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH17O14917 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.28■■□□□ 1
PCDH17O14917 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PCDH17O14917 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PCDH17O14917 AC110285.6-201ENST00000617652 491 ntBASIC21.27■■□□□ 1
PCDH17O14917 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.27■■□□□ 1
PCDH17O14917 ALDH1A3-203ENST00000557963 1670 ntBASIC21.27■■□□□ 1
PCDH17O14917 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDH17O14917 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDH17O14917 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH17O14917 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH17O14917 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH17O14917 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
PCDH17O14917 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH17O14917 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDH17O14917 AC241377.3-202ENST00000626088 1088 ntBASIC21.26■□□□□ 0.99
PCDH17O14917 AC241585.3-202ENST00000628937 1088 ntBASIC21.26■□□□□ 0.99
PCDH17O14917 AC245100.8-202ENST00000629247 1058 ntBASIC21.26■□□□□ 0.99
PCDH17O14917 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDH17O14917 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH17O14917 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH17O14917 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDH17O14917 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDH17O14917 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH17O14917 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDH17O14917 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH17O14917 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH17O14917 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH17O14917 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDH17O14917 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.25■□□□□ 0.99
PCDH17O14917 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH17O14917 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PCDH17O14917 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH17O14917 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PCDH17O14917 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH17O14917 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH17O14917 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PCDH17O14917 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH17O14917 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDH17O14917 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH17O14917 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.24■□□□□ 0.99
PCDH17O14917 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH17O14917 AC079834.2-201ENST00000609776 1949 ntBASIC21.24■□□□□ 0.99
PCDH17O14917 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDH17O14917 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCDH17O14917 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PCDH17O14917 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms