Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC33.07■■■□□ 2.88
DDX49Q9Y6V7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC33.07■■■□□ 2.88
DDX49Q9Y6V7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC33.05■■■□□ 2.88
DDX49Q9Y6V7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
DDX49Q9Y6V7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC33.05■■■□□ 2.88
DDX49Q9Y6V7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
DDX49Q9Y6V7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
DDX49Q9Y6V7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
DDX49Q9Y6V7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC33.02■■■□□ 2.88
DDX49Q9Y6V7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
DDX49Q9Y6V7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC32.96■■■□□ 2.87
DDX49Q9Y6V7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC32.96■■■□□ 2.87
DDX49Q9Y6V7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
DDX49Q9Y6V7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC32.95■■■□□ 2.86
DDX49Q9Y6V7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC32.94■■■□□ 2.86
DDX49Q9Y6V7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
DDX49Q9Y6V7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
DDX49Q9Y6V7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
DDX49Q9Y6V7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.89■■■□□ 2.86
DDX49Q9Y6V7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.88■■■□□ 2.85
DDX49Q9Y6V7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC32.88■■■□□ 2.85
DDX49Q9Y6V7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
DDX49Q9Y6V7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
DDX49Q9Y6V7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC32.85■■■□□ 2.85
DDX49Q9Y6V7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.85■■■□□ 2.85
DDX49Q9Y6V7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
DDX49Q9Y6V7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
DDX49Q9Y6V7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC32.84■■■□□ 2.85
DDX49Q9Y6V7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
DDX49Q9Y6V7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC32.84■■■□□ 2.85
DDX49Q9Y6V7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC32.82■■■□□ 2.84
DDX49Q9Y6V7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
DDX49Q9Y6V7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
DDX49Q9Y6V7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.78■■■□□ 2.84
DDX49Q9Y6V7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
DDX49Q9Y6V7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC32.77■■■□□ 2.84
DDX49Q9Y6V7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.76■■■□□ 2.83
DDX49Q9Y6V7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.76■■■□□ 2.83
DDX49Q9Y6V7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC32.76■■■□□ 2.83
DDX49Q9Y6V7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
DDX49Q9Y6V7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.75■■■□□ 2.83
DDX49Q9Y6V7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.74■■■□□ 2.83
DDX49Q9Y6V7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.71■■■□□ 2.83
DDX49Q9Y6V7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.7■■■□□ 2.83
DDX49Q9Y6V7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC32.7■■■□□ 2.83
DDX49Q9Y6V7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
DDX49Q9Y6V7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC32.69■■■□□ 2.82
DDX49Q9Y6V7 RARRES2P7-201ENST00000567349 469 ntBASIC32.67■■■□□ 2.82
DDX49Q9Y6V7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
DDX49Q9Y6V7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.67■■■□□ 2.82
DDX49Q9Y6V7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
DDX49Q9Y6V7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.65■■■□□ 2.82
DDX49Q9Y6V7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
DDX49Q9Y6V7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC32.6■■■□□ 2.81
DDX49Q9Y6V7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
DDX49Q9Y6V7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC32.59■■■□□ 2.81
DDX49Q9Y6V7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
DDX49Q9Y6V7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
DDX49Q9Y6V7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
DDX49Q9Y6V7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
DDX49Q9Y6V7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC32.56■■■□□ 2.8
DDX49Q9Y6V7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
DDX49Q9Y6V7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.53■■■□□ 2.8
DDX49Q9Y6V7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
DDX49Q9Y6V7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
DDX49Q9Y6V7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.52■■■□□ 2.8
DDX49Q9Y6V7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC32.52■■■□□ 2.8
DDX49Q9Y6V7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
DDX49Q9Y6V7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
DDX49Q9Y6V7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.51■■■□□ 2.79
DDX49Q9Y6V7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.79
DDX49Q9Y6V7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
DDX49Q9Y6V7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC32.48■■■□□ 2.79
DDX49Q9Y6V7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.48■■■□□ 2.79
DDX49Q9Y6V7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
DDX49Q9Y6V7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC32.48■■■□□ 2.79
DDX49Q9Y6V7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.45■■■□□ 2.79
DDX49Q9Y6V7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC32.44■■■□□ 2.78
DDX49Q9Y6V7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
DDX49Q9Y6V7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
DDX49Q9Y6V7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC32.44■■■□□ 2.78
DDX49Q9Y6V7 AC136428.2-201ENST00000563187 214 ntBASIC32.44■■■□□ 2.78
DDX49Q9Y6V7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
DDX49Q9Y6V7 AC097358.2-201ENST00000607541 1159 ntBASIC32.42■■■□□ 2.78
DDX49Q9Y6V7 SETD8P1-201ENST00000623146 1180 ntBASIC32.42■■■□□ 2.78
DDX49Q9Y6V7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.41■■■□□ 2.78
DDX49Q9Y6V7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.41■■■□□ 2.78
DDX49Q9Y6V7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.41■■■□□ 2.78
DDX49Q9Y6V7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
DDX49Q9Y6V7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC32.35■■■□□ 2.77
DDX49Q9Y6V7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
DDX49Q9Y6V7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.34■■■□□ 2.77
DDX49Q9Y6V7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
DDX49Q9Y6V7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
DDX49Q9Y6V7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.33■■■□□ 2.77
DDX49Q9Y6V7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
DDX49Q9Y6V7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
DDX49Q9Y6V7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
DDX49Q9Y6V7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.29■■■□□ 2.76
DDX49Q9Y6V7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms