Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
PCDHGB3Q9Y5G1 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHGB3Q9Y5G1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.19■■□□□ 1.78
PCDHGB3Q9Y5G1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.19■■□□□ 1.78
PCDHGB3Q9Y5G1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.18■■□□□ 1.78
PCDHGB3Q9Y5G1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
PCDHGB3Q9Y5G1 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHGB3Q9Y5G1 DYNLL1-208ENST00000550178 581 ntBASIC26.17■■□□□ 1.78
PCDHGB3Q9Y5G1 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHGB3Q9Y5G1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGB3Q9Y5G1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHGB3Q9Y5G1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHGB3Q9Y5G1 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHGB3Q9Y5G1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
PCDHGB3Q9Y5G1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHGB3Q9Y5G1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHGB3Q9Y5G1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHGB3Q9Y5G1 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHGB3Q9Y5G1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.09■■□□□ 1.77
PCDHGB3Q9Y5G1 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHGB3Q9Y5G1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHGB3Q9Y5G1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHGB3Q9Y5G1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHGB3Q9Y5G1 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.06■■□□□ 1.76
PCDHGB3Q9Y5G1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHGB3Q9Y5G1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHGB3Q9Y5G1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHGB3Q9Y5G1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHGB3Q9Y5G1 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.04■■□□□ 1.76
PCDHGB3Q9Y5G1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.03■■□□□ 1.76
PCDHGB3Q9Y5G1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGB3Q9Y5G1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
PCDHGB3Q9Y5G1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.03■■□□□ 1.76
PCDHGB3Q9Y5G1 AL031258.1-201ENST00000623562 325 ntBASIC26.02■■□□□ 1.76
PCDHGB3Q9Y5G1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHGB3Q9Y5G1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.02■■□□□ 1.76
PCDHGB3Q9Y5G1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
PCDHGB3Q9Y5G1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.01■■□□□ 1.75
PCDHGB3Q9Y5G1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26■■□□□ 1.75
PCDHGB3Q9Y5G1 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
PCDHGB3Q9Y5G1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26■■□□□ 1.75
PCDHGB3Q9Y5G1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHGB3Q9Y5G1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHGB3Q9Y5G1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHGB3Q9Y5G1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.97■■□□□ 1.75
PCDHGB3Q9Y5G1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.96■■□□□ 1.75
PCDHGB3Q9Y5G1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHGB3Q9Y5G1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
PCDHGB3Q9Y5G1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHGB3Q9Y5G1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
PCDHGB3Q9Y5G1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.91■■□□□ 1.74
PCDHGB3Q9Y5G1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHGB3Q9Y5G1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHGB3Q9Y5G1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.89■■□□□ 1.74
PCDHGB3Q9Y5G1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.88■■□□□ 1.73
PCDHGB3Q9Y5G1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
PCDHGB3Q9Y5G1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHGB3Q9Y5G1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHGB3Q9Y5G1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHGB3Q9Y5G1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHGB3Q9Y5G1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHGB3Q9Y5G1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHGB3Q9Y5G1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHGB3Q9Y5G1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHGB3Q9Y5G1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
PCDHGB3Q9Y5G1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHGB3Q9Y5G1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.8■■□□□ 1.72
PCDHGB3Q9Y5G1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.8■■□□□ 1.72
PCDHGB3Q9Y5G1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.78■■□□□ 1.72
PCDHGB3Q9Y5G1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHGB3Q9Y5G1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHGB3Q9Y5G1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHGB3Q9Y5G1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
PCDHGB3Q9Y5G1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.76■■□□□ 1.71
PCDHGB3Q9Y5G1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.75■■□□□ 1.71
PCDHGB3Q9Y5G1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.75■■□□□ 1.71
PCDHGB3Q9Y5G1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.74■■□□□ 1.71
PCDHGB3Q9Y5G1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGB3Q9Y5G1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGB3Q9Y5G1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGB3Q9Y5G1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHGB3Q9Y5G1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.72■■□□□ 1.71
PCDHGB3Q9Y5G1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.7■■□□□ 1.7
PCDHGB3Q9Y5G1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.7■■□□□ 1.7
PCDHGB3Q9Y5G1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHGB3Q9Y5G1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHGB3Q9Y5G1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHGB3Q9Y5G1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.67■■□□□ 1.7
PCDHGB3Q9Y5G1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.66■■□□□ 1.7
PCDHGB3Q9Y5G1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGB3Q9Y5G1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGB3Q9Y5G1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.65■■□□□ 1.7
PCDHGB3Q9Y5G1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
PCDHGB3Q9Y5G1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHGB3Q9Y5G1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHGB3Q9Y5G1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.6■■□□□ 1.69
PCDHGB3Q9Y5G1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGB3Q9Y5G1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHGB3Q9Y5G1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHGB3Q9Y5G1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms