Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
BRD9Q9H8M2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
BRD9Q9H8M2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.08■■■□□ 2.25
BRD9Q9H8M2 AL391121.1-201ENST00000607967 1349 ntBASIC29.08■■■□□ 2.25
BRD9Q9H8M2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
BRD9Q9H8M2 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.07■■■□□ 2.24
BRD9Q9H8M2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
BRD9Q9H8M2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.05■■■□□ 2.24
BRD9Q9H8M2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
BRD9Q9H8M2 AL162393.1-201ENST00000437852 946 ntBASIC29.05■■■□□ 2.24
BRD9Q9H8M2 AL133380.1-201ENST00000506013 324 ntBASIC29.04■■■□□ 2.24
BRD9Q9H8M2 AP006261.1-201ENST00000584783 668 ntBASIC29.04■■■□□ 2.24
BRD9Q9H8M2 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
BRD9Q9H8M2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
BRD9Q9H8M2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
BRD9Q9H8M2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC29.01■■■□□ 2.23
BRD9Q9H8M2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
BRD9Q9H8M2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
BRD9Q9H8M2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
BRD9Q9H8M2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.96■■■□□ 2.23
BRD9Q9H8M2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.95■■■□□ 2.22
BRD9Q9H8M2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.94■■■□□ 2.22
BRD9Q9H8M2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
BRD9Q9H8M2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
BRD9Q9H8M2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
BRD9Q9H8M2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
BRD9Q9H8M2 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.91■■■□□ 2.22
BRD9Q9H8M2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
BRD9Q9H8M2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC28.89■■■□□ 2.22
BRD9Q9H8M2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.88■■■□□ 2.21
BRD9Q9H8M2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.88■■■□□ 2.21
BRD9Q9H8M2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
BRD9Q9H8M2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.87■■■□□ 2.21
BRD9Q9H8M2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC28.86■■■□□ 2.21
BRD9Q9H8M2 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
BRD9Q9H8M2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.85■■■□□ 2.21
BRD9Q9H8M2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
BRD9Q9H8M2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
BRD9Q9H8M2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
BRD9Q9H8M2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.82■■■□□ 2.2
BRD9Q9H8M2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
BRD9Q9H8M2 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC28.8■■■□□ 2.2
BRD9Q9H8M2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
BRD9Q9H8M2 MIR3665-201ENST00000578708 105 ntBASIC28.78■■■□□ 2.2
BRD9Q9H8M2 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
BRD9Q9H8M2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC28.77■■■□□ 2.2
BRD9Q9H8M2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
BRD9Q9H8M2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.76■■■□□ 2.19
BRD9Q9H8M2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC28.74■■■□□ 2.19
BRD9Q9H8M2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC28.74■■■□□ 2.19
BRD9Q9H8M2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
BRD9Q9H8M2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
BRD9Q9H8M2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.72■■■□□ 2.19
BRD9Q9H8M2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
BRD9Q9H8M2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
BRD9Q9H8M2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.69■■■□□ 2.18
BRD9Q9H8M2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
BRD9Q9H8M2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
BRD9Q9H8M2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
BRD9Q9H8M2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
BRD9Q9H8M2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
BRD9Q9H8M2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.65■■■□□ 2.18
BRD9Q9H8M2 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
BRD9Q9H8M2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.64■■■□□ 2.18
BRD9Q9H8M2 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.63■■■□□ 2.17
BRD9Q9H8M2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
BRD9Q9H8M2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
BRD9Q9H8M2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
BRD9Q9H8M2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.62■■■□□ 2.17
BRD9Q9H8M2 DUX4L28-201ENST00000623687 678 ntBASIC28.62■■■□□ 2.17
BRD9Q9H8M2 AC087741.3-201ENST00000624270 1347 ntBASIC28.62■■■□□ 2.17
BRD9Q9H8M2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
BRD9Q9H8M2 ABHD17AP4-201ENST00000411545 909 ntBASIC28.61■■■□□ 2.17
BRD9Q9H8M2 MIR762-201ENST00000390236 83 ntBASIC28.6■■■□□ 2.17
BRD9Q9H8M2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
BRD9Q9H8M2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.59■■■□□ 2.17
BRD9Q9H8M2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
BRD9Q9H8M2 MIR7108-201ENST00000614319 87 ntBASIC28.58■■■□□ 2.17
BRD9Q9H8M2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
BRD9Q9H8M2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
BRD9Q9H8M2 AC005559.1-201ENST00000589661 871 ntBASIC28.56■■■□□ 2.16
BRD9Q9H8M2 AC044849.2-201ENST00000606596 710 ntBASIC28.55■■■□□ 2.16
BRD9Q9H8M2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.54■■■□□ 2.16
BRD9Q9H8M2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.54■■■□□ 2.16
BRD9Q9H8M2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
BRD9Q9H8M2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.5■■■□□ 2.15
BRD9Q9H8M2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
BRD9Q9H8M2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.49■■■□□ 2.15
BRD9Q9H8M2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
BRD9Q9H8M2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.48■■■□□ 2.15
BRD9Q9H8M2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.46■■■□□ 2.15
BRD9Q9H8M2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
BRD9Q9H8M2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
BRD9Q9H8M2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.45■■■□□ 2.14
BRD9Q9H8M2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.44■■■□□ 2.14
BRD9Q9H8M2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
BRD9Q9H8M2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.41■■■□□ 2.14
BRD9Q9H8M2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
BRD9Q9H8M2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
BRD9Q9H8M2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.36■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms