Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
VPS33BQ9H267 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC34.6■■■■□ 3.13
VPS33BQ9H267 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
VPS33BQ9H267 HNRNPLP2-201ENST00000568980 1570 ntBASIC34.59■■■■□ 3.13
VPS33BQ9H267 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
VPS33BQ9H267 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
VPS33BQ9H267 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC34.54■■■■□ 3.12
VPS33BQ9H267 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
VPS33BQ9H267 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC34.54■■■■□ 3.12
VPS33BQ9H267 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC34.53■■■■□ 3.12
VPS33BQ9H267 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC34.53■■■■□ 3.12
VPS33BQ9H267 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC34.49■■■■□ 3.11
VPS33BQ9H267 MIR3665-201ENST00000578708 105 ntBASIC34.48■■■■□ 3.11
VPS33BQ9H267 EBPL-202ENST00000378268 680 ntTSL 3 BASIC34.46■■■■□ 3.11
VPS33BQ9H267 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
VPS33BQ9H267 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
VPS33BQ9H267 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
VPS33BQ9H267 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC34.42■■■■□ 3.1
VPS33BQ9H267 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC34.41■■■■□ 3.1
VPS33BQ9H267 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC34.41■■■■□ 3.1
VPS33BQ9H267 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC34.41■■■■□ 3.1
VPS33BQ9H267 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC34.4■■■■□ 3.1
VPS33BQ9H267 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC34.4■■■■□ 3.1
VPS33BQ9H267 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
VPS33BQ9H267 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
VPS33BQ9H267 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
VPS33BQ9H267 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC34.39■■■■□ 3.1
VPS33BQ9H267 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC34.38■■■■□ 3.09
VPS33BQ9H267 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
VPS33BQ9H267 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC34.33■■■■□ 3.09
VPS33BQ9H267 ABHD17AP4-201ENST00000411545 909 ntBASIC34.32■■■■□ 3.08
VPS33BQ9H267 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
VPS33BQ9H267 AC087741.3-201ENST00000624270 1347 ntBASIC34.28■■■■□ 3.08
VPS33BQ9H267 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
VPS33BQ9H267 MLEC-202ENST00000412616 841 ntTSL 3 BASIC34.26■■■■□ 3.08
VPS33BQ9H267 CHML-205ENST00000638160 705 ntTSL 3 BASIC34.26■■■■□ 3.08
VPS33BQ9H267 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
VPS33BQ9H267 MIR7108-201ENST00000614319 87 ntBASIC34.24■■■■□ 3.07
VPS33BQ9H267 DUX4L28-201ENST00000623687 678 ntBASIC34.21■■■■□ 3.07
VPS33BQ9H267 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
VPS33BQ9H267 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC34.18■■■■□ 3.06
VPS33BQ9H267 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
VPS33BQ9H267 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
VPS33BQ9H267 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
VPS33BQ9H267 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC34.16■■■■□ 3.06
VPS33BQ9H267 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC34.16■■■■□ 3.06
VPS33BQ9H267 MIR762-201ENST00000390236 83 ntBASIC34.15■■■■□ 3.06
VPS33BQ9H267 AC044849.2-201ENST00000606596 710 ntBASIC34.15■■■■□ 3.06
VPS33BQ9H267 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC34.15■■■■□ 3.06
VPS33BQ9H267 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC34.14■■■■□ 3.06
VPS33BQ9H267 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC34.11■■■■□ 3.05
VPS33BQ9H267 AC005559.1-201ENST00000589661 871 ntBASIC34.08■■■■□ 3.05
VPS33BQ9H267 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC34.07■■■■□ 3.05
VPS33BQ9H267 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
VPS33BQ9H267 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
VPS33BQ9H267 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
VPS33BQ9H267 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC34.05■■■■□ 3.04
VPS33BQ9H267 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
VPS33BQ9H267 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC34.03■■■■□ 3.04
VPS33BQ9H267 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC34.02■■■■□ 3.04
VPS33BQ9H267 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC34.02■■■■□ 3.04
VPS33BQ9H267 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.04
VPS33BQ9H267 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
VPS33BQ9H267 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC33.99■■■■□ 3.03
VPS33BQ9H267 PVT1-219ENST00000523427 938 ntTSL 3 BASIC33.98■■■■□ 3.03
VPS33BQ9H267 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC33.97■■■■□ 3.03
VPS33BQ9H267 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC33.97■■■■□ 3.03
VPS33BQ9H267 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
VPS33BQ9H267 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC33.96■■■■□ 3.03
VPS33BQ9H267 DENR-202ENST00000455982 1052 ntTSL 5 BASIC33.96■■■■□ 3.03
VPS33BQ9H267 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
VPS33BQ9H267 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
VPS33BQ9H267 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC33.95■■■■□ 3.03
VPS33BQ9H267 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC33.92■■■■□ 3.02
VPS33BQ9H267 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC33.92■■■■□ 3.02
VPS33BQ9H267 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC33.92■■■■□ 3.02
VPS33BQ9H267 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC33.92■■■■□ 3.02
VPS33BQ9H267 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC33.92■■■■□ 3.02
VPS33BQ9H267 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
VPS33BQ9H267 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC33.88■■■■□ 3.01
VPS33BQ9H267 MBP-237ENST00000579129 1052 ntTSL 5 BASIC33.87■■■■□ 3.01
VPS33BQ9H267 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
VPS33BQ9H267 HLA-V-202ENST00000446817 847 ntBASIC33.86■■■■□ 3.01
VPS33BQ9H267 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC33.86■■■■□ 3.01
VPS33BQ9H267 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
VPS33BQ9H267 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
VPS33BQ9H267 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
VPS33BQ9H267 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
VPS33BQ9H267 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
VPS33BQ9H267 BOD1-206ENST00000480951 814 ntTSL 2 BASIC33.84■■■■□ 3.01
VPS33BQ9H267 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC33.84■■■■□ 3.01
VPS33BQ9H267 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC33.82■■■■□ 3
VPS33BQ9H267 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC33.82■■■■□ 3
VPS33BQ9H267 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC33.8■■■■□ 3
VPS33BQ9H267 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC33.79■■■■□ 3
VPS33BQ9H267 ZNRF2P2-203ENST00000454624 420 ntBASIC33.79■■■■□ 3
VPS33BQ9H267 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC33.78■■■■□ 3
VPS33BQ9H267 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
VPS33BQ9H267 WASH5P-204ENST00000632292 975 ntBASIC33.74■■■□□ 2.99
VPS33BQ9H267 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC33.71■■■□□ 2.99
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms