Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.15■■□□□ 1.78
COL21A1Q96P44 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL21A1Q96P44 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.13■■□□□ 1.77
COL21A1Q96P44 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL21A1Q96P44 AL031258.1-201ENST00000623562 325 ntBASIC26.12■■□□□ 1.77
COL21A1Q96P44 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
COL21A1Q96P44 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
COL21A1Q96P44 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.11■■□□□ 1.77
COL21A1Q96P44 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
COL21A1Q96P44 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.09■■□□□ 1.77
COL21A1Q96P44 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
COL21A1Q96P44 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
COL21A1Q96P44 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
COL21A1Q96P44 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
COL21A1Q96P44 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
COL21A1Q96P44 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
COL21A1Q96P44 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL21A1Q96P44 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
COL21A1Q96P44 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.01■■□□□ 1.75
COL21A1Q96P44 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
COL21A1Q96P44 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
COL21A1Q96P44 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL21A1Q96P44 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.99■■□□□ 1.75
COL21A1Q96P44 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.99■■□□□ 1.75
COL21A1Q96P44 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.98■■□□□ 1.75
COL21A1Q96P44 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL21A1Q96P44 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL21A1Q96P44 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
COL21A1Q96P44 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL21A1Q96P44 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.97■■□□□ 1.75
COL21A1Q96P44 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL21A1Q96P44 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL21A1Q96P44 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
COL21A1Q96P44 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.95■■□□□ 1.74
COL21A1Q96P44 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
COL21A1Q96P44 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
COL21A1Q96P44 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL21A1Q96P44 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL21A1Q96P44 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL21A1Q96P44 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
COL21A1Q96P44 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.88■■□□□ 1.73
COL21A1Q96P44 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
COL21A1Q96P44 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.86■■□□□ 1.73
COL21A1Q96P44 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
COL21A1Q96P44 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL21A1Q96P44 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.84■■□□□ 1.73
COL21A1Q96P44 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.84■■□□□ 1.73
COL21A1Q96P44 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL21A1Q96P44 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
COL21A1Q96P44 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.81■■□□□ 1.72
COL21A1Q96P44 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL21A1Q96P44 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
COL21A1Q96P44 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL21A1Q96P44 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.79■■□□□ 1.72
COL21A1Q96P44 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.79■■□□□ 1.72
COL21A1Q96P44 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL21A1Q96P44 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
COL21A1Q96P44 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL21A1Q96P44 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
COL21A1Q96P44 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.77■■□□□ 1.72
COL21A1Q96P44 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL21A1Q96P44 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.77■■□□□ 1.72
COL21A1Q96P44 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL21A1Q96P44 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
COL21A1Q96P44 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.75■■□□□ 1.71
COL21A1Q96P44 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL21A1Q96P44 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL21A1Q96P44 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.74■■□□□ 1.71
COL21A1Q96P44 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL21A1Q96P44 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL21A1Q96P44 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
COL21A1Q96P44 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL21A1Q96P44 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.72■■□□□ 1.71
COL21A1Q96P44 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL21A1Q96P44 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.71■■□□□ 1.71
COL21A1Q96P44 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL21A1Q96P44 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL21A1Q96P44 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.69■■□□□ 1.7
COL21A1Q96P44 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL21A1Q96P44 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.66■■□□□ 1.7
COL21A1Q96P44 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
COL21A1Q96P44 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.65■■□□□ 1.7
COL21A1Q96P44 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL21A1Q96P44 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.64■■□□□ 1.7
COL21A1Q96P44 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
COL21A1Q96P44 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.63■■□□□ 1.69
COL21A1Q96P44 AC120057.4-201ENST00000624722 1615 ntBASIC25.63■■□□□ 1.69
COL21A1Q96P44 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.62■■□□□ 1.69
COL21A1Q96P44 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL21A1Q96P44 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.61■■□□□ 1.69
COL21A1Q96P44 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL21A1Q96P44 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.59■■□□□ 1.69
COL21A1Q96P44 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL21A1Q96P44 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
COL21A1Q96P44 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
COL21A1Q96P44 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL21A1Q96P44 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL21A1Q96P44 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.54■■□□□ 1.68
COL21A1Q96P44 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.54■■□□□ 1.68
COL21A1Q96P44 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms