Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
NCLNQ969V3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.66■■□□□ 1.86
NCLNQ969V3 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NCLNQ969V3 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
NCLNQ969V3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.64■■□□□ 1.86
NCLNQ969V3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
NCLNQ969V3 AL031258.1-201ENST00000623562 325 ntBASIC26.63■■□□□ 1.85
NCLNQ969V3 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
NCLNQ969V3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
NCLNQ969V3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
NCLNQ969V3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
NCLNQ969V3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.61■■□□□ 1.85
NCLNQ969V3 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
NCLNQ969V3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NCLNQ969V3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.58■■□□□ 1.85
NCLNQ969V3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
NCLNQ969V3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NCLNQ969V3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NCLNQ969V3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NCLNQ969V3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.55■■□□□ 1.84
NCLNQ969V3 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NCLNQ969V3 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.54■■□□□ 1.84
NCLNQ969V3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NCLNQ969V3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NCLNQ969V3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NCLNQ969V3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.84
NCLNQ969V3 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NCLNQ969V3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NCLNQ969V3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
NCLNQ969V3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NCLNQ969V3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
NCLNQ969V3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NCLNQ969V3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
NCLNQ969V3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
NCLNQ969V3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.46■■□□□ 1.83
NCLNQ969V3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
NCLNQ969V3 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
NCLNQ969V3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
NCLNQ969V3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
NCLNQ969V3 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NCLNQ969V3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.41■■□□□ 1.82
NCLNQ969V3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.39■■□□□ 1.82
NCLNQ969V3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.39■■□□□ 1.82
NCLNQ969V3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.39■■□□□ 1.82
NCLNQ969V3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
NCLNQ969V3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.38■■□□□ 1.81
NCLNQ969V3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
NCLNQ969V3 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NCLNQ969V3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
NCLNQ969V3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.35■■□□□ 1.81
NCLNQ969V3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NCLNQ969V3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.34■■□□□ 1.81
NCLNQ969V3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NCLNQ969V3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
NCLNQ969V3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.32■■□□□ 1.8
NCLNQ969V3 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.32■■□□□ 1.8
NCLNQ969V3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.32■■□□□ 1.8
NCLNQ969V3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.32■■□□□ 1.8
NCLNQ969V3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NCLNQ969V3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NCLNQ969V3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.3■■□□□ 1.8
NCLNQ969V3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NCLNQ969V3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
NCLNQ969V3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NCLNQ969V3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NCLNQ969V3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.28■■□□□ 1.8
NCLNQ969V3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NCLNQ969V3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
NCLNQ969V3 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.27■■□□□ 1.8
NCLNQ969V3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
NCLNQ969V3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
NCLNQ969V3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NCLNQ969V3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.23■■□□□ 1.79
NCLNQ969V3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NCLNQ969V3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NCLNQ969V3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.21■■□□□ 1.79
NCLNQ969V3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
NCLNQ969V3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
NCLNQ969V3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.19■■□□□ 1.78
NCLNQ969V3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NCLNQ969V3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NCLNQ969V3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
NCLNQ969V3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.16■■□□□ 1.78
NCLNQ969V3 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.15■■□□□ 1.78
NCLNQ969V3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
NCLNQ969V3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NCLNQ969V3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NCLNQ969V3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.11■■□□□ 1.77
NCLNQ969V3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.11■■□□□ 1.77
NCLNQ969V3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
NCLNQ969V3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.09■■□□□ 1.77
NCLNQ969V3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.08■■□□□ 1.77
NCLNQ969V3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.08■■□□□ 1.77
NCLNQ969V3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
NCLNQ969V3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.07■■□□□ 1.76
NCLNQ969V3 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NCLNQ969V3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.05■■□□□ 1.76
NCLNQ969V3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.05■■□□□ 1.76
NCLNQ969V3 RARRES2P7-201ENST00000567349 469 ntBASIC26.04■■□□□ 1.76
NCLNQ969V3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms