Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC47.17■■■■■ 5.14
CHMP7Q8WUX9 MVK-208ENST00000539696 608 ntTSL 5 BASIC47.16■■■■■ 5.14
CHMP7Q8WUX9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC47.15■■■■■ 5.14
CHMP7Q8WUX9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC47.15■■■■■ 5.14
CHMP7Q8WUX9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC47.15■■■■■ 5.14
CHMP7Q8WUX9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC47.14■■■■■ 5.14
CHMP7Q8WUX9 MIR3665-201ENST00000578708 105 ntBASIC47.14■■■■■ 5.14
CHMP7Q8WUX9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC47.13■■■■■ 5.14
CHMP7Q8WUX9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC47.13■■■■■ 5.14
CHMP7Q8WUX9 AL133380.1-201ENST00000506013 324 ntBASIC47.12■■■■■ 5.13
CHMP7Q8WUX9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC47.1■■■■■ 5.13
CHMP7Q8WUX9 AC145285.7-201ENST00000614819 1539 ntBASIC47.1■■■■■ 5.13
CHMP7Q8WUX9 HLA-V-202ENST00000446817 847 ntBASIC47.09■■■■■ 5.13
CHMP7Q8WUX9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC47.07■■■■■ 5.13
CHMP7Q8WUX9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC47.03■■■■■ 5.12
CHMP7Q8WUX9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC47.03■■■■■ 5.12
CHMP7Q8WUX9 AC087741.3-201ENST00000624270 1347 ntBASIC47.03■■■■■ 5.12
CHMP7Q8WUX9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC47.02■■■■■ 5.12
CHMP7Q8WUX9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC47■■■■■ 5.12
CHMP7Q8WUX9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC47■■■■■ 5.11
CHMP7Q8WUX9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC46.97■■■■■ 5.11
CHMP7Q8WUX9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC46.97■■■■■ 5.11
CHMP7Q8WUX9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC46.92■■■■■ 5.1
CHMP7Q8WUX9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC46.9■■■■■ 5.1
CHMP7Q8WUX9 DUX4L28-201ENST00000623687 678 ntBASIC46.9■■■■■ 5.1
CHMP7Q8WUX9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC46.89■■■■■ 5.1
CHMP7Q8WUX9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC46.89■■■■■ 5.1
CHMP7Q8WUX9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC46.88■■■■■ 5.1
CHMP7Q8WUX9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC46.86■■■■■ 5.09
CHMP7Q8WUX9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC46.76■■■■■ 5.08
CHMP7Q8WUX9 AC044849.2-201ENST00000606596 710 ntBASIC46.76■■■■■ 5.08
CHMP7Q8WUX9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC46.75■■■■■ 5.07
CHMP7Q8WUX9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC46.73■■■■■ 5.07
CHMP7Q8WUX9 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC46.73■■■■■ 5.07
CHMP7Q8WUX9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC46.73■■■■■ 5.07
CHMP7Q8WUX9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC46.72■■■■■ 5.07
CHMP7Q8WUX9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC46.72■■■■■ 5.07
CHMP7Q8WUX9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC46.72■■■■■ 5.07
CHMP7Q8WUX9 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC46.72■■■■■ 5.07
CHMP7Q8WUX9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC46.71■■■■■ 5.07
CHMP7Q8WUX9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC46.68■■■■■ 5.06
CHMP7Q8WUX9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC46.66■■■■■ 5.06
CHMP7Q8WUX9 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC46.66■■■■■ 5.06
CHMP7Q8WUX9 CHML-205ENST00000638160 705 ntTSL 3 BASIC46.66■■■■■ 5.06
CHMP7Q8WUX9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC46.64■■■■■ 5.06
CHMP7Q8WUX9 MIR762-201ENST00000390236 83 ntBASIC46.6■■■■■ 5.05
CHMP7Q8WUX9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC46.57■■■■■ 5.05
CHMP7Q8WUX9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC46.56■■■■■ 5.04
CHMP7Q8WUX9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC46.55■■■■■ 5.04
CHMP7Q8WUX9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC46.54■■■■■ 5.04
CHMP7Q8WUX9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC46.53■■■■■ 5.04
CHMP7Q8WUX9 ZNRF2P2-203ENST00000454624 420 ntBASIC46.52■■■■■ 5.04
CHMP7Q8WUX9 AC005559.1-201ENST00000589661 871 ntBASIC46.52■■■■■ 5.04
CHMP7Q8WUX9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC46.5■■■■■ 5.03
CHMP7Q8WUX9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC46.48■■■■■ 5.03
CHMP7Q8WUX9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC46.48■■■■■ 5.03
CHMP7Q8WUX9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC46.47■■■■■ 5.03
CHMP7Q8WUX9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC46.47■■■■■ 5.03
CHMP7Q8WUX9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC46.46■■■■■ 5.03
CHMP7Q8WUX9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC46.44■■■■■ 5.02
CHMP7Q8WUX9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC46.43■■■■■ 5.02
CHMP7Q8WUX9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC46.43■■■■■ 5.02
CHMP7Q8WUX9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC46.4■■■■■ 5.02
CHMP7Q8WUX9 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC46.38■■■■■ 5.02
CHMP7Q8WUX9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC46.38■■■■■ 5.01
CHMP7Q8WUX9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC46.33■■■■■ 5.01
CHMP7Q8WUX9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC46.31■■■■■ 5
CHMP7Q8WUX9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC46.31■■■■■ 5
CHMP7Q8WUX9 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC46.3■■■■■ 5
CHMP7Q8WUX9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC46.3■■■■■ 5
CHMP7Q8WUX9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC46.3■■■■■ 5
CHMP7Q8WUX9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC46.3■■■■■ 5
CHMP7Q8WUX9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC46.29■■■■■ 5
CHMP7Q8WUX9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC46.27■■■■■ 5
CHMP7Q8WUX9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC46.27■■■■■ 5
CHMP7Q8WUX9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC46.22■■■■■ 4.99
CHMP7Q8WUX9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC46.22■■■■■ 4.99
CHMP7Q8WUX9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC46.21■■■■■ 4.99
CHMP7Q8WUX9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC46.2■■■■■ 4.99
CHMP7Q8WUX9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC46.2■■■■■ 4.99
CHMP7Q8WUX9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC46.19■■■■■ 4.98
CHMP7Q8WUX9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC46.19■■■■■ 4.98
CHMP7Q8WUX9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC46.19■■■■■ 4.98
CHMP7Q8WUX9 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC46.16■■■■■ 4.98
CHMP7Q8WUX9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC46.14■■■■■ 4.98
CHMP7Q8WUX9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC46.13■■■■■ 4.98
CHMP7Q8WUX9 MIR4449-201ENST00000578365 66 ntBASIC46.11■■■■■ 4.97
CHMP7Q8WUX9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC46.11■■■■■ 4.97
CHMP7Q8WUX9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC46.06■■■■■ 4.96
CHMP7Q8WUX9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC46.05■■■■■ 4.96
CHMP7Q8WUX9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC46■■■■■ 4.95
CHMP7Q8WUX9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC46■■■■■ 4.95
CHMP7Q8WUX9 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC45.99■■■■■ 4.95
CHMP7Q8WUX9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC45.99■■■■■ 4.95
CHMP7Q8WUX9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC45.99■■■■■ 4.95
CHMP7Q8WUX9 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC45.94■■■■■ 4.95
CHMP7Q8WUX9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC45.94■■■■■ 4.94
CHMP7Q8WUX9 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC45.89■■■■■ 4.94
CHMP7Q8WUX9 MIR639-201ENST00000384974 98 ntBASIC45.89■■■■■ 4.94
CHMP7Q8WUX9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC45.89■■■■■ 4.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms