Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.52■■■□□ 2
PHC3Q8NDX5 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.52■■■□□ 2
PHC3Q8NDX5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC27.52■■■□□ 2
PHC3Q8NDX5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC27.52■■■□□ 2
PHC3Q8NDX5 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.52■■■□□ 2
PHC3Q8NDX5 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.51■■■□□ 2
PHC3Q8NDX5 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.49■■□□□ 1.99
PHC3Q8NDX5 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PHC3Q8NDX5 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PHC3Q8NDX5 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PHC3Q8NDX5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC27.48■■□□□ 1.99
PHC3Q8NDX5 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PHC3Q8NDX5 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
PHC3Q8NDX5 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
PHC3Q8NDX5 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.44■■□□□ 1.98
PHC3Q8NDX5 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PHC3Q8NDX5 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PHC3Q8NDX5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC27.41■■□□□ 1.98
PHC3Q8NDX5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PHC3Q8NDX5 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC27.39■■□□□ 1.98
PHC3Q8NDX5 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PHC3Q8NDX5 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PHC3Q8NDX5 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
PHC3Q8NDX5 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PHC3Q8NDX5 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PHC3Q8NDX5 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PHC3Q8NDX5 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.34■■□□□ 1.97
PHC3Q8NDX5 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
PHC3Q8NDX5 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PHC3Q8NDX5 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PHC3Q8NDX5 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
PHC3Q8NDX5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.29■■□□□ 1.96
PHC3Q8NDX5 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PHC3Q8NDX5 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.28■■□□□ 1.96
PHC3Q8NDX5 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
PHC3Q8NDX5 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.25■■□□□ 1.95
PHC3Q8NDX5 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PHC3Q8NDX5 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.24■■□□□ 1.95
PHC3Q8NDX5 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
PHC3Q8NDX5 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.23■■□□□ 1.95
PHC3Q8NDX5 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PHC3Q8NDX5 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.22■■□□□ 1.95
PHC3Q8NDX5 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PHC3Q8NDX5 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PHC3Q8NDX5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.21■■□□□ 1.95
PHC3Q8NDX5 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PHC3Q8NDX5 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PHC3Q8NDX5 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PHC3Q8NDX5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.18■■□□□ 1.94
PHC3Q8NDX5 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PHC3Q8NDX5 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.16■■□□□ 1.94
PHC3Q8NDX5 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PHC3Q8NDX5 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PHC3Q8NDX5 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.14■■□□□ 1.94
PHC3Q8NDX5 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PHC3Q8NDX5 AL161658.1-201ENST00000623641 1967 ntBASIC27.13■■□□□ 1.93
PHC3Q8NDX5 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
PHC3Q8NDX5 RARRES2P7-201ENST00000567349 469 ntBASIC27.13■■□□□ 1.93
PHC3Q8NDX5 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PHC3Q8NDX5 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
PHC3Q8NDX5 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PHC3Q8NDX5 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PHC3Q8NDX5 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
PHC3Q8NDX5 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
PHC3Q8NDX5 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.09■■□□□ 1.93
PHC3Q8NDX5 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC27.09■■□□□ 1.93
PHC3Q8NDX5 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PHC3Q8NDX5 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
PHC3Q8NDX5 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PHC3Q8NDX5 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PHC3Q8NDX5 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.07■■□□□ 1.92
PHC3Q8NDX5 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.07■■□□□ 1.92
PHC3Q8NDX5 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PHC3Q8NDX5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.05■■□□□ 1.92
PHC3Q8NDX5 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.05■■□□□ 1.92
PHC3Q8NDX5 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PHC3Q8NDX5 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.04■■□□□ 1.92
PHC3Q8NDX5 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
PHC3Q8NDX5 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PHC3Q8NDX5 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
PHC3Q8NDX5 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.03■■□□□ 1.92
PHC3Q8NDX5 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
PHC3Q8NDX5 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PHC3Q8NDX5 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
PHC3Q8NDX5 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PHC3Q8NDX5 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.02■■□□□ 1.92
PHC3Q8NDX5 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.01■■□□□ 1.91
PHC3Q8NDX5 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PHC3Q8NDX5 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
PHC3Q8NDX5 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
PHC3Q8NDX5 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.98■■□□□ 1.91
PHC3Q8NDX5 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PHC3Q8NDX5 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PHC3Q8NDX5 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PHC3Q8NDX5 SETD8P1-201ENST00000623146 1180 ntBASIC26.97■■□□□ 1.91
PHC3Q8NDX5 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
PHC3Q8NDX5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PHC3Q8NDX5 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PHC3Q8NDX5 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PHC3Q8NDX5 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.95■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms