Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SMRP1Q8NCR6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
SMRP1Q8NCR6 AL133380.1-201ENST00000506013 324 ntBASIC29.78■■■□□ 2.36
SMRP1Q8NCR6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
SMRP1Q8NCR6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
SMRP1Q8NCR6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SMRP1Q8NCR6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
SMRP1Q8NCR6 MIR7108-201ENST00000614319 87 ntBASIC29.74■■■□□ 2.35
SMRP1Q8NCR6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
SMRP1Q8NCR6 ABHD17AP4-201ENST00000411545 909 ntBASIC29.72■■■□□ 2.35
SMRP1Q8NCR6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.71■■■□□ 2.35
SMRP1Q8NCR6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.7■■■□□ 2.35
SMRP1Q8NCR6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.68■■■□□ 2.34
SMRP1Q8NCR6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.68■■■□□ 2.34
SMRP1Q8NCR6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
SMRP1Q8NCR6 MIR3665-201ENST00000578708 105 ntBASIC29.68■■■□□ 2.34
SMRP1Q8NCR6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.67■■■□□ 2.34
SMRP1Q8NCR6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.66■■■□□ 2.34
SMRP1Q8NCR6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SMRP1Q8NCR6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SMRP1Q8NCR6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.64■■■□□ 2.34
SMRP1Q8NCR6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SMRP1Q8NCR6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.6■■■□□ 2.33
SMRP1Q8NCR6 AC087741.3-201ENST00000624270 1347 ntBASIC29.58■■■□□ 2.33
SMRP1Q8NCR6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
SMRP1Q8NCR6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.56■■■□□ 2.32
SMRP1Q8NCR6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.56■■■□□ 2.32
SMRP1Q8NCR6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
SMRP1Q8NCR6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.55■■■□□ 2.32
SMRP1Q8NCR6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
SMRP1Q8NCR6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SMRP1Q8NCR6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
SMRP1Q8NCR6 DUX4L28-201ENST00000623687 678 ntBASIC29.52■■■□□ 2.32
SMRP1Q8NCR6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.49■■■□□ 2.31
SMRP1Q8NCR6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.48■■■□□ 2.31
SMRP1Q8NCR6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.48■■■□□ 2.31
SMRP1Q8NCR6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
SMRP1Q8NCR6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.48■■■□□ 2.31
SMRP1Q8NCR6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
SMRP1Q8NCR6 AC044849.2-201ENST00000606596 710 ntBASIC29.46■■■□□ 2.31
SMRP1Q8NCR6 HLA-V-202ENST00000446817 847 ntBASIC29.45■■■□□ 2.31
SMRP1Q8NCR6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.45■■■□□ 2.31
SMRP1Q8NCR6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
SMRP1Q8NCR6 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.44■■■□□ 2.3
SMRP1Q8NCR6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SMRP1Q8NCR6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.42■■■□□ 2.3
SMRP1Q8NCR6 MIR762-201ENST00000390236 83 ntBASIC29.39■■■□□ 2.3
SMRP1Q8NCR6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.39■■■□□ 2.3
SMRP1Q8NCR6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
SMRP1Q8NCR6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.38■■■□□ 2.29
SMRP1Q8NCR6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SMRP1Q8NCR6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SMRP1Q8NCR6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SMRP1Q8NCR6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.35■■■□□ 2.29
SMRP1Q8NCR6 AC005559.1-201ENST00000589661 871 ntBASIC29.35■■■□□ 2.29
SMRP1Q8NCR6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.34■■■□□ 2.29
SMRP1Q8NCR6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.33■■■□□ 2.29
SMRP1Q8NCR6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
SMRP1Q8NCR6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SMRP1Q8NCR6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.28■■■□□ 2.28
SMRP1Q8NCR6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.25■■■□□ 2.27
SMRP1Q8NCR6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
SMRP1Q8NCR6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SMRP1Q8NCR6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.24■■■□□ 2.27
SMRP1Q8NCR6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.23■■■□□ 2.27
SMRP1Q8NCR6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.23■■■□□ 2.27
SMRP1Q8NCR6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.22■■■□□ 2.27
SMRP1Q8NCR6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
SMRP1Q8NCR6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.21■■■□□ 2.27
SMRP1Q8NCR6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.21■■■□□ 2.27
SMRP1Q8NCR6 ZNRF2P2-203ENST00000454624 420 ntBASIC29.21■■■□□ 2.27
SMRP1Q8NCR6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.2■■■□□ 2.26
SMRP1Q8NCR6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
SMRP1Q8NCR6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.19■■■□□ 2.26
SMRP1Q8NCR6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
SMRP1Q8NCR6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.17■■■□□ 2.26
SMRP1Q8NCR6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.16■■■□□ 2.26
SMRP1Q8NCR6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.14■■■□□ 2.26
SMRP1Q8NCR6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
SMRP1Q8NCR6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
SMRP1Q8NCR6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
SMRP1Q8NCR6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.1■■■□□ 2.25
SMRP1Q8NCR6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
SMRP1Q8NCR6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
SMRP1Q8NCR6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SMRP1Q8NCR6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
SMRP1Q8NCR6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
SMRP1Q8NCR6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SMRP1Q8NCR6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
SMRP1Q8NCR6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.05■■■□□ 2.24
SMRP1Q8NCR6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.04■■■□□ 2.24
SMRP1Q8NCR6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
SMRP1Q8NCR6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.03■■■□□ 2.24
SMRP1Q8NCR6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SMRP1Q8NCR6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
SMRP1Q8NCR6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
SMRP1Q8NCR6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29■■■□□ 2.23
SMRP1Q8NCR6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29■■■□□ 2.23
SMRP1Q8NCR6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
SMRP1Q8NCR6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms