Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.86■■■□□ 2.21
RFX6Q8HWS3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RFX6Q8HWS3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
RFX6Q8HWS3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
RFX6Q8HWS3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC28.84■■■□□ 2.21
RFX6Q8HWS3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RFX6Q8HWS3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC28.82■■■□□ 2.2
RFX6Q8HWS3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.82■■■□□ 2.2
RFX6Q8HWS3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.81■■■□□ 2.2
RFX6Q8HWS3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
RFX6Q8HWS3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
RFX6Q8HWS3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.78■■■□□ 2.2
RFX6Q8HWS3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
RFX6Q8HWS3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
RFX6Q8HWS3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
RFX6Q8HWS3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.77■■■□□ 2.2
RFX6Q8HWS3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
RFX6Q8HWS3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.75■■■□□ 2.19
RFX6Q8HWS3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.75■■■□□ 2.19
RFX6Q8HWS3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
RFX6Q8HWS3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
RFX6Q8HWS3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
RFX6Q8HWS3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.73■■■□□ 2.19
RFX6Q8HWS3 AP002365.1-201ENST00000603448 772 ntBASIC28.72■■■□□ 2.19
RFX6Q8HWS3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
RFX6Q8HWS3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.71■■■□□ 2.19
RFX6Q8HWS3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.71■■■□□ 2.19
RFX6Q8HWS3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
RFX6Q8HWS3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.69■■■□□ 2.18
RFX6Q8HWS3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.69■■■□□ 2.18
RFX6Q8HWS3 AL031258.1-201ENST00000623562 325 ntBASIC28.68■■■□□ 2.18
RFX6Q8HWS3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.68■■■□□ 2.18
RFX6Q8HWS3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
RFX6Q8HWS3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RFX6Q8HWS3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RFX6Q8HWS3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
RFX6Q8HWS3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.66■■■□□ 2.18
RFX6Q8HWS3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RFX6Q8HWS3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RFX6Q8HWS3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RFX6Q8HWS3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RFX6Q8HWS3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
RFX6Q8HWS3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.62■■■□□ 2.17
RFX6Q8HWS3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.62■■■□□ 2.17
RFX6Q8HWS3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.61■■■□□ 2.17
RFX6Q8HWS3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.6■■■□□ 2.17
RFX6Q8HWS3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
RFX6Q8HWS3 AC120057.4-201ENST00000624722 1615 ntBASIC28.59■■■□□ 2.17
RFX6Q8HWS3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.59■■■□□ 2.17
RFX6Q8HWS3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
RFX6Q8HWS3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
RFX6Q8HWS3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
RFX6Q8HWS3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RFX6Q8HWS3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.53■■■□□ 2.16
RFX6Q8HWS3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
RFX6Q8HWS3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
RFX6Q8HWS3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RFX6Q8HWS3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.51■■■□□ 2.15
RFX6Q8HWS3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RFX6Q8HWS3 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.5■■■□□ 2.15
RFX6Q8HWS3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.5■■■□□ 2.15
RFX6Q8HWS3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.48■■■□□ 2.15
RFX6Q8HWS3 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RFX6Q8HWS3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.44■■■□□ 2.14
RFX6Q8HWS3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
RFX6Q8HWS3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.43■■■□□ 2.14
RFX6Q8HWS3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
RFX6Q8HWS3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
RFX6Q8HWS3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
RFX6Q8HWS3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
RFX6Q8HWS3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.42■■■□□ 2.14
RFX6Q8HWS3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
RFX6Q8HWS3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
RFX6Q8HWS3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
RFX6Q8HWS3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
RFX6Q8HWS3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RFX6Q8HWS3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
RFX6Q8HWS3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RFX6Q8HWS3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
RFX6Q8HWS3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.33■■■□□ 2.13
RFX6Q8HWS3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RFX6Q8HWS3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RFX6Q8HWS3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
RFX6Q8HWS3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
RFX6Q8HWS3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.3■■■□□ 2.12
RFX6Q8HWS3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.3■■■□□ 2.12
RFX6Q8HWS3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.3■■■□□ 2.12
RFX6Q8HWS3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
RFX6Q8HWS3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
RFX6Q8HWS3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
RFX6Q8HWS3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.29■■■□□ 2.12
RFX6Q8HWS3 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
RFX6Q8HWS3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.28■■■□□ 2.12
RFX6Q8HWS3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RFX6Q8HWS3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
RFX6Q8HWS3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.26■■■□□ 2.11
RFX6Q8HWS3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
RFX6Q8HWS3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
RFX6Q8HWS3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
RFX6Q8HWS3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms