Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 SUZ12P1-203ENST00000578195 985 ntBASIC35.73■■■■□ 3.31
COPS6Q7L5N1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC35.72■■■■□ 3.31
COPS6Q7L5N1 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
COPS6Q7L5N1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC35.68■■■■□ 3.3
COPS6Q7L5N1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
COPS6Q7L5N1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC35.68■■■■□ 3.3
COPS6Q7L5N1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
COPS6Q7L5N1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
COPS6Q7L5N1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
COPS6Q7L5N1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
COPS6Q7L5N1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
COPS6Q7L5N1 CAHM-201ENST00000604200 896 ntBASIC35.6■■■■□ 3.29
COPS6Q7L5N1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC35.59■■■■□ 3.29
COPS6Q7L5N1 AL133380.1-201ENST00000506013 324 ntBASIC35.59■■■■□ 3.29
COPS6Q7L5N1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC35.58■■■■□ 3.29
COPS6Q7L5N1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
COPS6Q7L5N1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC35.56■■■■□ 3.28
COPS6Q7L5N1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC35.56■■■■□ 3.28
COPS6Q7L5N1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC35.51■■■■□ 3.28
COPS6Q7L5N1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC35.48■■■■□ 3.27
COPS6Q7L5N1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
COPS6Q7L5N1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
COPS6Q7L5N1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC35.47■■■■□ 3.27
COPS6Q7L5N1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC35.47■■■■□ 3.27
COPS6Q7L5N1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
COPS6Q7L5N1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
COPS6Q7L5N1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC35.42■■■■□ 3.26
COPS6Q7L5N1 AL391121.1-201ENST00000607967 1349 ntBASIC35.42■■■■□ 3.26
COPS6Q7L5N1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC35.4■■■■□ 3.26
COPS6Q7L5N1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
COPS6Q7L5N1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
COPS6Q7L5N1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
COPS6Q7L5N1 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
COPS6Q7L5N1 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
COPS6Q7L5N1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC35.33■■■■□ 3.25
COPS6Q7L5N1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC35.32■■■■□ 3.24
COPS6Q7L5N1 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
COPS6Q7L5N1 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC35.29■■■■□ 3.24
COPS6Q7L5N1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC35.28■■■■□ 3.24
COPS6Q7L5N1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC35.28■■■■□ 3.24
COPS6Q7L5N1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC35.27■■■■□ 3.24
COPS6Q7L5N1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC35.27■■■■□ 3.24
COPS6Q7L5N1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC35.26■■■■□ 3.24
COPS6Q7L5N1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
COPS6Q7L5N1 RPS2P35-201ENST00000443417 897 ntBASIC35.25■■■■□ 3.23
COPS6Q7L5N1 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
COPS6Q7L5N1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC35.21■■■■□ 3.23
COPS6Q7L5N1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
COPS6Q7L5N1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
COPS6Q7L5N1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
COPS6Q7L5N1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
COPS6Q7L5N1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC35.18■■■■□ 3.22
COPS6Q7L5N1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
COPS6Q7L5N1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC35.15■■■■□ 3.22
COPS6Q7L5N1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC35.13■■■■□ 3.21
COPS6Q7L5N1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
COPS6Q7L5N1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC35.1■■■■□ 3.21
COPS6Q7L5N1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
COPS6Q7L5N1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC35.09■■■■□ 3.21
COPS6Q7L5N1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC35.07■■■■□ 3.2
COPS6Q7L5N1 AL162393.1-201ENST00000437852 946 ntBASIC35.06■■■■□ 3.2
COPS6Q7L5N1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
COPS6Q7L5N1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
COPS6Q7L5N1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC35.04■■■■□ 3.2
COPS6Q7L5N1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC35.04■■■■□ 3.2
COPS6Q7L5N1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
COPS6Q7L5N1 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
COPS6Q7L5N1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC35.02■■■■□ 3.2
COPS6Q7L5N1 HNRNPLP2-201ENST00000568980 1570 ntBASIC35.02■■■■□ 3.2
COPS6Q7L5N1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
COPS6Q7L5N1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
COPS6Q7L5N1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
COPS6Q7L5N1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
COPS6Q7L5N1 AP006261.1-201ENST00000584783 668 ntBASIC35■■■■□ 3.19
COPS6Q7L5N1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
COPS6Q7L5N1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC34.99■■■■□ 3.19
COPS6Q7L5N1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC34.98■■■■□ 3.19
COPS6Q7L5N1 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC34.97■■■■□ 3.19
COPS6Q7L5N1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
COPS6Q7L5N1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
COPS6Q7L5N1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
COPS6Q7L5N1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC34.95■■■■□ 3.18
COPS6Q7L5N1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC34.94■■■■□ 3.18
COPS6Q7L5N1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
COPS6Q7L5N1 WASH5P-204ENST00000632292 975 ntBASIC34.92■■■■□ 3.18
COPS6Q7L5N1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
COPS6Q7L5N1 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
COPS6Q7L5N1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC34.9■■■■□ 3.18
COPS6Q7L5N1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC34.9■■■■□ 3.18
COPS6Q7L5N1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC34.89■■■■□ 3.18
COPS6Q7L5N1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC34.88■■■■□ 3.17
COPS6Q7L5N1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC34.88■■■■□ 3.17
COPS6Q7L5N1 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
COPS6Q7L5N1 MIR762-201ENST00000390236 83 ntBASIC34.86■■■■□ 3.17
COPS6Q7L5N1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
COPS6Q7L5N1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
COPS6Q7L5N1 CHML-205ENST00000638160 705 ntTSL 3 BASIC34.84■■■■□ 3.17
COPS6Q7L5N1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC34.83■■■■□ 3.17
COPS6Q7L5N1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
COPS6Q7L5N1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC34.82■■■■□ 3.17
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms