Protein–RNA interactions for Protein: Q5TBB1

RNASEH2B, Ribonuclease H2 subunit B, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNASEH2BQ5TBB1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RNASEH2BQ5TBB1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RNASEH2BQ5TBB1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
RNASEH2BQ5TBB1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
RNASEH2BQ5TBB1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.46■■■□□ 2.15
RNASEH2BQ5TBB1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.46■■■□□ 2.15
RNASEH2BQ5TBB1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RNASEH2BQ5TBB1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
RNASEH2BQ5TBB1 AC006077.2-201ENST00000623591 457 ntBASIC28.44■■■□□ 2.14
RNASEH2BQ5TBB1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.43■■■□□ 2.14
RNASEH2BQ5TBB1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
RNASEH2BQ5TBB1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
RNASEH2BQ5TBB1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.42■■■□□ 2.14
RNASEH2BQ5TBB1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.39■■■□□ 2.14
RNASEH2BQ5TBB1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
RNASEH2BQ5TBB1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
RNASEH2BQ5TBB1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.38■■■□□ 2.13
RNASEH2BQ5TBB1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RNASEH2BQ5TBB1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RNASEH2BQ5TBB1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RNASEH2BQ5TBB1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RNASEH2BQ5TBB1 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RNASEH2BQ5TBB1 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RNASEH2BQ5TBB1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
RNASEH2BQ5TBB1 AC120057.4-201ENST00000624722 1615 ntBASIC28.32■■■□□ 2.12
RNASEH2BQ5TBB1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.31■■■□□ 2.12
RNASEH2BQ5TBB1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
RNASEH2BQ5TBB1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC28.3■■■□□ 2.12
RNASEH2BQ5TBB1 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
RNASEH2BQ5TBB1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
RNASEH2BQ5TBB1 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.29■■■□□ 2.12
RNASEH2BQ5TBB1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.29■■■□□ 2.12
RNASEH2BQ5TBB1 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RNASEH2BQ5TBB1 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
RNASEH2BQ5TBB1 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
RNASEH2BQ5TBB1 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
RNASEH2BQ5TBB1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.24■■■□□ 2.11
RNASEH2BQ5TBB1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
RNASEH2BQ5TBB1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RNASEH2BQ5TBB1 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RNASEH2BQ5TBB1 ZNRF2P1-201ENST00000441407 443 ntBASIC28.19■■■□□ 2.1
RNASEH2BQ5TBB1 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.19■■■□□ 2.1
RNASEH2BQ5TBB1 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.19■■■□□ 2.1
RNASEH2BQ5TBB1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
RNASEH2BQ5TBB1 MVK-208ENST00000539696 608 ntTSL 5 BASIC28.18■■■□□ 2.1
RNASEH2BQ5TBB1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RNASEH2BQ5TBB1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
RNASEH2BQ5TBB1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RNASEH2BQ5TBB1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RNASEH2BQ5TBB1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
RNASEH2BQ5TBB1 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RNASEH2BQ5TBB1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
RNASEH2BQ5TBB1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.14■■■□□ 2.1
RNASEH2BQ5TBB1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC28.13■■■□□ 2.09
RNASEH2BQ5TBB1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
RNASEH2BQ5TBB1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.13■■■□□ 2.09
RNASEH2BQ5TBB1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RNASEH2BQ5TBB1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RNASEH2BQ5TBB1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RNASEH2BQ5TBB1 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.11■■■□□ 2.09
RNASEH2BQ5TBB1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
RNASEH2BQ5TBB1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
RNASEH2BQ5TBB1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
RNASEH2BQ5TBB1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RNASEH2BQ5TBB1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC28.06■■■□□ 2.08
RNASEH2BQ5TBB1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
RNASEH2BQ5TBB1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
RNASEH2BQ5TBB1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
RNASEH2BQ5TBB1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RNASEH2BQ5TBB1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RNASEH2BQ5TBB1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.04■■■□□ 2.08
RNASEH2BQ5TBB1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC28.03■■■□□ 2.08
RNASEH2BQ5TBB1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.02■■■□□ 2.08
RNASEH2BQ5TBB1 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
RNASEH2BQ5TBB1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
RNASEH2BQ5TBB1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
RNASEH2BQ5TBB1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.99■■■□□ 2.07
RNASEH2BQ5TBB1 ABCB10P1-201ENST00000614297 2181 ntBASIC27.99■■■□□ 2.07
RNASEH2BQ5TBB1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
RNASEH2BQ5TBB1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RNASEH2BQ5TBB1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
RNASEH2BQ5TBB1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.94■■■□□ 2.06
RNASEH2BQ5TBB1 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RNASEH2BQ5TBB1 DYNLL1-208ENST00000550178 581 ntBASIC27.92■■■□□ 2.06
RNASEH2BQ5TBB1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
RNASEH2BQ5TBB1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RNASEH2BQ5TBB1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.92■■■□□ 2.06
RNASEH2BQ5TBB1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.91■■■□□ 2.06
RNASEH2BQ5TBB1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.91■■■□□ 2.06
RNASEH2BQ5TBB1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
RNASEH2BQ5TBB1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
RNASEH2BQ5TBB1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
RNASEH2BQ5TBB1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RNASEH2BQ5TBB1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RNASEH2BQ5TBB1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
RNASEH2BQ5TBB1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
RNASEH2BQ5TBB1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
RNASEH2BQ5TBB1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.81■■■□□ 2.04
RNASEH2BQ5TBB1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RNASEH2BQ5TBB1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms