Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TRIM60Q495X7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
TRIM60Q495X7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
TRIM60Q495X7 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.49■■■□□ 2.63
TRIM60Q495X7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TRIM60Q495X7 AL133380.1-201ENST00000506013 324 ntBASIC31.47■■■□□ 2.63
TRIM60Q495X7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
TRIM60Q495X7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
TRIM60Q495X7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
TRIM60Q495X7 MIR7108-201ENST00000614319 87 ntBASIC31.45■■■□□ 2.63
TRIM60Q495X7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TRIM60Q495X7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.41■■■□□ 2.62
TRIM60Q495X7 ABHD17AP4-201ENST00000411545 909 ntBASIC31.41■■■□□ 2.62
TRIM60Q495X7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
TRIM60Q495X7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.37■■■□□ 2.61
TRIM60Q495X7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM60Q495X7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM60Q495X7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.36■■■□□ 2.61
TRIM60Q495X7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
TRIM60Q495X7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.34■■■□□ 2.61
TRIM60Q495X7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.34■■■□□ 2.61
TRIM60Q495X7 MIR3665-201ENST00000578708 105 ntBASIC31.34■■■□□ 2.61
TRIM60Q495X7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TRIM60Q495X7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.32■■■□□ 2.6
TRIM60Q495X7 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TRIM60Q495X7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.27■■■□□ 2.6
TRIM60Q495X7 AC087741.3-201ENST00000624270 1347 ntBASIC31.25■■■□□ 2.59
TRIM60Q495X7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.25■■■□□ 2.59
TRIM60Q495X7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
TRIM60Q495X7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.24■■■□□ 2.59
TRIM60Q495X7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
TRIM60Q495X7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
TRIM60Q495X7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
TRIM60Q495X7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
TRIM60Q495X7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.21■■■□□ 2.59
TRIM60Q495X7 DUX4L28-201ENST00000623687 678 ntBASIC31.21■■■□□ 2.59
TRIM60Q495X7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TRIM60Q495X7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.19■■■□□ 2.58
TRIM60Q495X7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.16■■■□□ 2.58
TRIM60Q495X7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.15■■■□□ 2.58
TRIM60Q495X7 HLA-V-202ENST00000446817 847 ntBASIC31.14■■■□□ 2.58
TRIM60Q495X7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TRIM60Q495X7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.14■■■□□ 2.58
TRIM60Q495X7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
TRIM60Q495X7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.12■■■□□ 2.57
TRIM60Q495X7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
TRIM60Q495X7 AC044849.2-201ENST00000606596 710 ntBASIC31.1■■■□□ 2.57
TRIM60Q495X7 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.1■■■□□ 2.57
TRIM60Q495X7 MIR762-201ENST00000390236 83 ntBASIC31.08■■■□□ 2.57
TRIM60Q495X7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.08■■■□□ 2.57
TRIM60Q495X7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
TRIM60Q495X7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
TRIM60Q495X7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.03■■■□□ 2.56
TRIM60Q495X7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
TRIM60Q495X7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.02■■■□□ 2.56
TRIM60Q495X7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.02■■■□□ 2.56
TRIM60Q495X7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
TRIM60Q495X7 AC005559.1-201ENST00000589661 871 ntBASIC31.02■■■□□ 2.56
TRIM60Q495X7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.98■■■□□ 2.55
TRIM60Q495X7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
TRIM60Q495X7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.97■■■□□ 2.55
TRIM60Q495X7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
TRIM60Q495X7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
TRIM60Q495X7 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
TRIM60Q495X7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.91■■■□□ 2.54
TRIM60Q495X7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.89■■■□□ 2.54
TRIM60Q495X7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.89■■■□□ 2.54
TRIM60Q495X7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.89■■■□□ 2.54
TRIM60Q495X7 ZNRF2P2-203ENST00000454624 420 ntBASIC30.88■■■□□ 2.53
TRIM60Q495X7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.87■■■□□ 2.53
TRIM60Q495X7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.87■■■□□ 2.53
TRIM60Q495X7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.87■■■□□ 2.53
TRIM60Q495X7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.87■■■□□ 2.53
TRIM60Q495X7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.87■■■□□ 2.53
TRIM60Q495X7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
TRIM60Q495X7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
TRIM60Q495X7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
TRIM60Q495X7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.82■■■□□ 2.52
TRIM60Q495X7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.82■■■□□ 2.52
TRIM60Q495X7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
TRIM60Q495X7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.8■■■□□ 2.52
TRIM60Q495X7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
TRIM60Q495X7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.78■■■□□ 2.52
TRIM60Q495X7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.78■■■□□ 2.52
TRIM60Q495X7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
TRIM60Q495X7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
TRIM60Q495X7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.75■■■□□ 2.51
TRIM60Q495X7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
TRIM60Q495X7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
TRIM60Q495X7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
TRIM60Q495X7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.71■■■□□ 2.51
TRIM60Q495X7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
TRIM60Q495X7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
TRIM60Q495X7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
TRIM60Q495X7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM60Q495X7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TRIM60Q495X7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
TRIM60Q495X7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
TRIM60Q495X7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM60Q495X7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.66■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms