Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 AL133380.1-201ENST00000506013 324 ntBASIC30.61■■■□□ 2.49
TTC3P53804 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TTC3P53804 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.61■■■□□ 2.49
TTC3P53804 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
TTC3P53804 AL162393.1-201ENST00000437852 946 ntBASIC30.58■■■□□ 2.49
TTC3P53804 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.57■■■□□ 2.48
TTC3P53804 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
TTC3P53804 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.54■■■□□ 2.48
TTC3P53804 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.5■■■□□ 2.47
TTC3P53804 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.48■■■□□ 2.47
TTC3P53804 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
TTC3P53804 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
TTC3P53804 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.45■■■□□ 2.46
TTC3P53804 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.44■■■□□ 2.46
TTC3P53804 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
TTC3P53804 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.43■■■□□ 2.46
TTC3P53804 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
TTC3P53804 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
TTC3P53804 AP006261.1-201ENST00000584783 668 ntBASIC30.4■■■□□ 2.46
TTC3P53804 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
TTC3P53804 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
TTC3P53804 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TTC3P53804 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
TTC3P53804 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
TTC3P53804 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
TTC3P53804 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.32■■■□□ 2.44
TTC3P53804 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.32■■■□□ 2.44
TTC3P53804 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
TTC3P53804 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.31■■■□□ 2.44
TTC3P53804 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TTC3P53804 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.3■■■□□ 2.44
TTC3P53804 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TTC3P53804 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.29■■■□□ 2.44
TTC3P53804 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
TTC3P53804 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
TTC3P53804 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.28■■■□□ 2.44
TTC3P53804 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
TTC3P53804 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
TTC3P53804 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.23■■■□□ 2.43
TTC3P53804 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
TTC3P53804 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
TTC3P53804 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
TTC3P53804 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.2■■■□□ 2.42
TTC3P53804 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.19■■■□□ 2.42
TTC3P53804 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
TTC3P53804 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
TTC3P53804 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
TTC3P53804 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.18■■■□□ 2.42
TTC3P53804 MIR3665-201ENST00000578708 105 ntBASIC30.18■■■□□ 2.42
TTC3P53804 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
TTC3P53804 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
TTC3P53804 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.17■■■□□ 2.42
TTC3P53804 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
TTC3P53804 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.15■■■□□ 2.42
TTC3P53804 DUX4L28-201ENST00000623687 678 ntBASIC30.15■■■□□ 2.42
TTC3P53804 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
TTC3P53804 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
TTC3P53804 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.15■■■□□ 2.42
TTC3P53804 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
TTC3P53804 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
TTC3P53804 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.14■■■□□ 2.42
TTC3P53804 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
TTC3P53804 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.1■■■□□ 2.41
TTC3P53804 AC087741.3-201ENST00000624270 1347 ntBASIC30.08■■■□□ 2.41
TTC3P53804 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
TTC3P53804 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.06■■■□□ 2.4
TTC3P53804 AC044849.2-201ENST00000606596 710 ntBASIC30.05■■■□□ 2.4
TTC3P53804 MIR762-201ENST00000390236 83 ntBASIC30.04■■■□□ 2.4
TTC3P53804 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
TTC3P53804 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
TTC3P53804 AC005559.1-201ENST00000589661 871 ntBASIC30.03■■■□□ 2.4
TTC3P53804 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
TTC3P53804 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.01■■■□□ 2.39
TTC3P53804 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
TTC3P53804 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30■■■□□ 2.39
TTC3P53804 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30■■■□□ 2.39
TTC3P53804 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30■■■□□ 2.39
TTC3P53804 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.99■■■□□ 2.39
TTC3P53804 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
TTC3P53804 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
TTC3P53804 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.98■■■□□ 2.39
TTC3P53804 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
TTC3P53804 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
TTC3P53804 ABHD17AP4-201ENST00000411545 909 ntBASIC29.95■■■□□ 2.38
TTC3P53804 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
TTC3P53804 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
TTC3P53804 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.93■■■□□ 2.38
TTC3P53804 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
TTC3P53804 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.9■■■□□ 2.38
TTC3P53804 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.89■■■□□ 2.38
TTC3P53804 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
TTC3P53804 MIR7108-201ENST00000614319 87 ntBASIC29.89■■■□□ 2.38
TTC3P53804 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
TTC3P53804 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
TTC3P53804 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.84■■■□□ 2.37
TTC3P53804 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.83■■■□□ 2.37
TTC3P53804 WASH5P-204ENST00000632292 975 ntBASIC29.81■■■□□ 2.36
TTC3P53804 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TTC3P53804 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
TTC3P53804 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.79■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms