Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CDK7P50613 AL133380.1-201ENST00000506013 324 ntBASIC31.43■■■□□ 2.62
CDK7P50613 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDK7P50613 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDK7P50613 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
CDK7P50613 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDK7P50613 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDK7P50613 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.41■■■□□ 2.62
CDK7P50613 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CDK7P50613 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CDK7P50613 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CDK7P50613 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
CDK7P50613 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.31■■■□□ 2.6
CDK7P50613 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.3■■■□□ 2.6
CDK7P50613 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CDK7P50613 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CDK7P50613 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CDK7P50613 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.25■■■□□ 2.59
CDK7P50613 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.25■■■□□ 2.59
CDK7P50613 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
CDK7P50613 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.21■■■□□ 2.59
CDK7P50613 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.19■■■□□ 2.58
CDK7P50613 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.19■■■□□ 2.58
CDK7P50613 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
CDK7P50613 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.19■■■□□ 2.58
CDK7P50613 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDK7P50613 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDK7P50613 MIR3665-201ENST00000578708 105 ntBASIC31.18■■■□□ 2.58
CDK7P50613 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CDK7P50613 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CDK7P50613 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CDK7P50613 ABHD17AP4-201ENST00000411545 909 ntBASIC31.14■■■□□ 2.58
CDK7P50613 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.14■■■□□ 2.58
CDK7P50613 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
CDK7P50613 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CDK7P50613 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.11■■■□□ 2.57
CDK7P50613 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31.09■■■□□ 2.57
CDK7P50613 AC087741.3-201ENST00000624270 1347 ntBASIC31.08■■■□□ 2.57
CDK7P50613 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CDK7P50613 MIR7108-201ENST00000614319 87 ntBASIC31.07■■■□□ 2.56
CDK7P50613 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CDK7P50613 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CDK7P50613 DUX4L28-201ENST00000623687 678 ntBASIC31.05■■■□□ 2.56
CDK7P50613 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CDK7P50613 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
CDK7P50613 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
CDK7P50613 CHML-205ENST00000638160 705 ntTSL 3 BASIC31■■■□□ 2.55
CDK7P50613 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.98■■■□□ 2.55
CDK7P50613 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.98■■■□□ 2.55
CDK7P50613 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CDK7P50613 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.97■■■□□ 2.55
CDK7P50613 MIR762-201ENST00000390236 83 ntBASIC30.96■■■□□ 2.55
CDK7P50613 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CDK7P50613 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.95■■■□□ 2.55
CDK7P50613 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.93■■■□□ 2.54
CDK7P50613 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CDK7P50613 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CDK7P50613 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CDK7P50613 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.9■■■□□ 2.54
CDK7P50613 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.9■■■□□ 2.54
CDK7P50613 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CDK7P50613 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
CDK7P50613 AC044849.2-201ENST00000606596 710 ntBASIC30.89■■■□□ 2.54
CDK7P50613 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CDK7P50613 AC005559.1-201ENST00000589661 871 ntBASIC30.87■■■□□ 2.53
CDK7P50613 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.85■■■□□ 2.53
CDK7P50613 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CDK7P50613 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.83■■■□□ 2.53
CDK7P50613 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CDK7P50613 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.83■■■□□ 2.53
CDK7P50613 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.82■■■□□ 2.52
CDK7P50613 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CDK7P50613 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CDK7P50613 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
CDK7P50613 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.79■■■□□ 2.52
CDK7P50613 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.79■■■□□ 2.52
CDK7P50613 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CDK7P50613 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.78■■■□□ 2.52
CDK7P50613 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
CDK7P50613 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.78■■■□□ 2.52
CDK7P50613 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.77■■■□□ 2.52
CDK7P50613 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.77■■■□□ 2.52
CDK7P50613 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.76■■■□□ 2.51
CDK7P50613 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.75■■■□□ 2.51
CDK7P50613 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
CDK7P50613 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CDK7P50613 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CDK7P50613 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CDK7P50613 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.73■■■□□ 2.51
CDK7P50613 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CDK7P50613 HLA-V-202ENST00000446817 847 ntBASIC30.72■■■□□ 2.51
CDK7P50613 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.5
CDK7P50613 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.69■■■□□ 2.5
CDK7P50613 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
CDK7P50613 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CDK7P50613 ZNRF2P2-203ENST00000454624 420 ntBASIC30.65■■■□□ 2.5
CDK7P50613 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.64■■■□□ 2.5
CDK7P50613 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.64■■■□□ 2.5
CDK7P50613 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.64■■■□□ 2.5
CDK7P50613 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms