Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC35.34■■■■□ 3.25
COL11A2P13942 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
COL11A2P13942 AP006261.1-201ENST00000584783 668 ntBASIC35.33■■■■□ 3.25
COL11A2P13942 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC35.29■■■■□ 3.24
COL11A2P13942 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
COL11A2P13942 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC35.24■■■■□ 3.23
COL11A2P13942 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
COL11A2P13942 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC35.23■■■■□ 3.23
COL11A2P13942 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC35.23■■■■□ 3.23
COL11A2P13942 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC35.2■■■■□ 3.23
COL11A2P13942 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC35.16■■■■□ 3.22
COL11A2P13942 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
COL11A2P13942 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
COL11A2P13942 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC35.14■■■■□ 3.22
COL11A2P13942 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
COL11A2P13942 EBPL-202ENST00000378268 680 ntTSL 3 BASIC35.12■■■■□ 3.21
COL11A2P13942 DUX4L28-201ENST00000623687 678 ntBASIC35.08■■■■□ 3.21
COL11A2P13942 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
COL11A2P13942 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC35.04■■■■□ 3.2
COL11A2P13942 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC35.03■■■■□ 3.2
COL11A2P13942 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC35.03■■■■□ 3.2
COL11A2P13942 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC35.02■■■■□ 3.2
COL11A2P13942 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC35.02■■■■□ 3.2
COL11A2P13942 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC35.02■■■■□ 3.2
COL11A2P13942 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC35.01■■■■□ 3.19
COL11A2P13942 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
COL11A2P13942 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
COL11A2P13942 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
COL11A2P13942 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
COL11A2P13942 AC087741.3-201ENST00000624270 1347 ntBASIC34.96■■■■□ 3.19
COL11A2P13942 MIR7108-201ENST00000614319 87 ntBASIC34.95■■■■□ 3.18
COL11A2P13942 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC34.93■■■■□ 3.18
COL11A2P13942 MIR3665-201ENST00000578708 105 ntBASIC34.93■■■■□ 3.18
COL11A2P13942 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC34.91■■■■□ 3.18
COL11A2P13942 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC34.91■■■■□ 3.18
COL11A2P13942 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
COL11A2P13942 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC34.9■■■■□ 3.18
COL11A2P13942 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
COL11A2P13942 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
COL11A2P13942 MLEC-202ENST00000412616 841 ntTSL 3 BASIC34.87■■■■□ 3.17
COL11A2P13942 AC044849.2-201ENST00000606596 710 ntBASIC34.85■■■■□ 3.17
COL11A2P13942 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
COL11A2P13942 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC34.83■■■■□ 3.17
COL11A2P13942 ABHD17AP4-201ENST00000411545 909 ntBASIC34.81■■■■□ 3.16
COL11A2P13942 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
COL11A2P13942 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC34.81■■■■□ 3.16
COL11A2P13942 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
COL11A2P13942 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC34.8■■■■□ 3.16
COL11A2P13942 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
COL11A2P13942 HLA-V-202ENST00000446817 847 ntBASIC34.75■■■■□ 3.15
COL11A2P13942 AC005559.1-201ENST00000589661 871 ntBASIC34.75■■■■□ 3.15
COL11A2P13942 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC34.75■■■■□ 3.15
COL11A2P13942 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC34.74■■■■□ 3.15
COL11A2P13942 MIR762-201ENST00000390236 83 ntBASIC34.74■■■■□ 3.15
COL11A2P13942 PVT1-219ENST00000523427 938 ntTSL 3 BASIC34.73■■■■□ 3.15
COL11A2P13942 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
COL11A2P13942 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
COL11A2P13942 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC34.69■■■■□ 3.14
COL11A2P13942 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC34.69■■■■□ 3.14
COL11A2P13942 CHML-205ENST00000638160 705 ntTSL 3 BASIC34.67■■■■□ 3.14
COL11A2P13942 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
COL11A2P13942 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC34.66■■■■□ 3.14
COL11A2P13942 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC34.64■■■■□ 3.14
COL11A2P13942 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC34.64■■■■□ 3.14
COL11A2P13942 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
COL11A2P13942 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC34.62■■■■□ 3.13
COL11A2P13942 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC34.62■■■■□ 3.13
COL11A2P13942 DENR-202ENST00000455982 1052 ntTSL 5 BASIC34.61■■■■□ 3.13
COL11A2P13942 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
COL11A2P13942 MBP-237ENST00000579129 1052 ntTSL 5 BASIC34.58■■■■□ 3.13
COL11A2P13942 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
COL11A2P13942 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
COL11A2P13942 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC34.55■■■■□ 3.12
COL11A2P13942 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC34.55■■■■□ 3.12
COL11A2P13942 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
COL11A2P13942 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
COL11A2P13942 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC34.53■■■■□ 3.12
COL11A2P13942 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC34.53■■■■□ 3.12
COL11A2P13942 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC34.53■■■■□ 3.12
COL11A2P13942 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
COL11A2P13942 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC34.52■■■■□ 3.12
COL11A2P13942 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
COL11A2P13942 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC34.5■■■■□ 3.11
COL11A2P13942 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC34.5■■■■□ 3.11
COL11A2P13942 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC34.5■■■■□ 3.11
COL11A2P13942 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
COL11A2P13942 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
COL11A2P13942 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC34.47■■■■□ 3.11
COL11A2P13942 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
COL11A2P13942 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
COL11A2P13942 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.1
COL11A2P13942 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
COL11A2P13942 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
COL11A2P13942 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
COL11A2P13942 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC34.42■■■■□ 3.1
COL11A2P13942 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC34.4■■■■□ 3.1
COL11A2P13942 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
COL11A2P13942 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
COL11A2P13942 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
COL11A2P13942 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms