Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.07■■■□□ 2.56
COL1A2P08123 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
COL1A2P08123 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.04■■■□□ 2.56
COL1A2P08123 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.04■■■□□ 2.56
COL1A2P08123 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
COL1A2P08123 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
COL1A2P08123 SUZ12P1-203ENST00000578195 985 ntBASIC31.02■■■□□ 2.56
COL1A2P08123 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
COL1A2P08123 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
COL1A2P08123 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
COL1A2P08123 AL133380.1-201ENST00000506013 324 ntBASIC30.99■■■□□ 2.55
COL1A2P08123 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
COL1A2P08123 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
COL1A2P08123 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.95■■■□□ 2.55
COL1A2P08123 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
COL1A2P08123 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.93■■■□□ 2.54
COL1A2P08123 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
COL1A2P08123 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.92■■■□□ 2.54
COL1A2P08123 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
COL1A2P08123 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.89■■■□□ 2.54
COL1A2P08123 CAHM-201ENST00000604200 896 ntBASIC30.89■■■□□ 2.54
COL1A2P08123 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.88■■■□□ 2.53
COL1A2P08123 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
COL1A2P08123 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.84■■■□□ 2.53
COL1A2P08123 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL1A2P08123 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL1A2P08123 AL391121.1-201ENST00000607967 1349 ntBASIC30.83■■■□□ 2.53
COL1A2P08123 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.82■■■□□ 2.52
COL1A2P08123 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.82■■■□□ 2.52
COL1A2P08123 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
COL1A2P08123 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
COL1A2P08123 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
COL1A2P08123 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
COL1A2P08123 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.77■■■□□ 2.52
COL1A2P08123 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
COL1A2P08123 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
COL1A2P08123 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
COL1A2P08123 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.73■■■□□ 2.51
COL1A2P08123 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
COL1A2P08123 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
COL1A2P08123 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.72■■■□□ 2.51
COL1A2P08123 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
COL1A2P08123 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
COL1A2P08123 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
COL1A2P08123 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
COL1A2P08123 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.64■■■□□ 2.5
COL1A2P08123 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
COL1A2P08123 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.63■■■□□ 2.49
COL1A2P08123 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
COL1A2P08123 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
COL1A2P08123 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
COL1A2P08123 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
COL1A2P08123 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.55■■■□□ 2.48
COL1A2P08123 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.54■■■□□ 2.48
COL1A2P08123 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
COL1A2P08123 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.54■■■□□ 2.48
COL1A2P08123 AP006261.1-201ENST00000584783 668 ntBASIC30.54■■■□□ 2.48
COL1A2P08123 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
COL1A2P08123 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
COL1A2P08123 RPS2P35-201ENST00000443417 897 ntBASIC30.52■■■□□ 2.48
COL1A2P08123 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
COL1A2P08123 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
COL1A2P08123 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.48■■■□□ 2.47
COL1A2P08123 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.47■■■□□ 2.47
COL1A2P08123 AL162393.1-201ENST00000437852 946 ntBASIC30.47■■■□□ 2.47
COL1A2P08123 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.46■■■□□ 2.47
COL1A2P08123 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.44■■■□□ 2.46
COL1A2P08123 WASH5P-204ENST00000632292 975 ntBASIC30.44■■■□□ 2.46
COL1A2P08123 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
COL1A2P08123 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
COL1A2P08123 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.44■■■□□ 2.46
COL1A2P08123 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
COL1A2P08123 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
COL1A2P08123 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.41■■■□□ 2.46
COL1A2P08123 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
COL1A2P08123 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
COL1A2P08123 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
COL1A2P08123 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.4■■■□□ 2.46
COL1A2P08123 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.39■■■□□ 2.46
COL1A2P08123 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
COL1A2P08123 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.38■■■□□ 2.45
COL1A2P08123 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
COL1A2P08123 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
COL1A2P08123 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
COL1A2P08123 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.37■■■□□ 2.45
COL1A2P08123 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
COL1A2P08123 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
COL1A2P08123 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.35■■■□□ 2.45
COL1A2P08123 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
COL1A2P08123 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.35■■■□□ 2.45
COL1A2P08123 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.34■■■□□ 2.45
COL1A2P08123 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
COL1A2P08123 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
COL1A2P08123 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
COL1A2P08123 MIR3665-201ENST00000578708 105 ntBASIC30.33■■■□□ 2.45
COL1A2P08123 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
COL1A2P08123 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
COL1A2P08123 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.32■■■□□ 2.44
COL1A2P08123 MIR762-201ENST00000390236 83 ntBASIC30.32■■■□□ 2.44
COL1A2P08123 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.31■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms