Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC38.34■■■■□ 3.73
COL1A2P08123 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC37.41■■■■□ 3.58
COL1A2P08123 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC37.32■■■■□ 3.57
COL1A2P08123 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.56
COL1A2P08123 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
COL1A2P08123 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC37.07■■■■□ 3.53
COL1A2P08123 AL356512.1-201ENST00000607453 1739 ntBASIC36.95■■■■□ 3.51
COL1A2P08123 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.75■■■■□ 3.47
COL1A2P08123 HES6-203ENST00000409160 1600 ntTSL 2 BASIC36.09■■■■□ 3.37
COL1A2P08123 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC36.02■■■■□ 3.36
COL1A2P08123 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.88■■■■□ 3.33
COL1A2P08123 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC35.82■■■■□ 3.33
COL1A2P08123 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC35.8■■■■□ 3.32
COL1A2P08123 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.72■■■■□ 3.31
COL1A2P08123 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC35.68■■■■□ 3.3
COL1A2P08123 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC35.65■■■■□ 3.3
COL1A2P08123 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.49■■■■□ 3.27
COL1A2P08123 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC35.46■■■■□ 3.27
COL1A2P08123 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
COL1A2P08123 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC35.12■■■■□ 3.21
COL1A2P08123 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC35.11■■■■□ 3.21
COL1A2P08123 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
COL1A2P08123 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
COL1A2P08123 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.89■■■■□ 3.18
COL1A2P08123 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
COL1A2P08123 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
COL1A2P08123 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
COL1A2P08123 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
COL1A2P08123 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC34.58■■■■□ 3.13
COL1A2P08123 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC34.45■■■■□ 3.11
COL1A2P08123 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC34.44■■■■□ 3.1
COL1A2P08123 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
COL1A2P08123 INO80B-203ENST00000409917 796 ntTSL 2 BASIC34.39■■■■□ 3.1
COL1A2P08123 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
COL1A2P08123 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC34.27■■■■□ 3.08
COL1A2P08123 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC34.17■■■■□ 3.06
COL1A2P08123 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
COL1A2P08123 AC015813.7-201ENST00000623294 581 ntBASIC34■■■■□ 3.03
COL1A2P08123 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
COL1A2P08123 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC33.88■■■■□ 3.01
COL1A2P08123 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.88■■■■□ 3.01
COL1A2P08123 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
COL1A2P08123 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.85■■■■□ 3.01
COL1A2P08123 AC006077.2-201ENST00000623591 457 ntBASIC33.85■■■■□ 3.01
COL1A2P08123 ZNRF2P1-201ENST00000441407 443 ntBASIC33.73■■■□□ 2.99
COL1A2P08123 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.7■■■□□ 2.98
COL1A2P08123 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
COL1A2P08123 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.64■■■□□ 2.98
COL1A2P08123 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.63■■■□□ 2.97
COL1A2P08123 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC33.48■■■□□ 2.95
COL1A2P08123 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33.48■■■□□ 2.95
COL1A2P08123 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.46■■■□□ 2.95
COL1A2P08123 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC33.45■■■□□ 2.94
COL1A2P08123 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
COL1A2P08123 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
COL1A2P08123 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
COL1A2P08123 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.3■■■□□ 2.92
COL1A2P08123 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC33.28■■■□□ 2.92
COL1A2P08123 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
COL1A2P08123 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
COL1A2P08123 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
COL1A2P08123 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
COL1A2P08123 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC33.09■■■□□ 2.89
COL1A2P08123 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC33■■■□□ 2.87
COL1A2P08123 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.96■■■□□ 2.87
COL1A2P08123 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
COL1A2P08123 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
COL1A2P08123 AP002365.1-201ENST00000603448 772 ntBASIC32.92■■■□□ 2.86
COL1A2P08123 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
COL1A2P08123 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
COL1A2P08123 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.82■■■□□ 2.84
COL1A2P08123 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
COL1A2P08123 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
COL1A2P08123 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC32.75■■■□□ 2.83
COL1A2P08123 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.74■■■□□ 2.83
COL1A2P08123 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.72■■■□□ 2.83
COL1A2P08123 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.72■■■□□ 2.83
COL1A2P08123 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
COL1A2P08123 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.7■■■□□ 2.83
COL1A2P08123 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.63■■■□□ 2.81
COL1A2P08123 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
COL1A2P08123 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
COL1A2P08123 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC32.6■■■□□ 2.81
COL1A2P08123 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
COL1A2P08123 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.8
COL1A2P08123 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.55■■■□□ 2.8
COL1A2P08123 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.55■■■□□ 2.8
COL1A2P08123 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
COL1A2P08123 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
COL1A2P08123 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.49■■■□□ 2.79
COL1A2P08123 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
COL1A2P08123 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
COL1A2P08123 DYNLL1-208ENST00000550178 581 ntBASIC32.45■■■□□ 2.79
COL1A2P08123 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.43■■■□□ 2.78
COL1A2P08123 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.41■■■□□ 2.78
COL1A2P08123 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
COL1A2P08123 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
COL1A2P08123 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC32.4■■■□□ 2.78
COL1A2P08123 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.37■■■□□ 2.77
COL1A2P08123 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.37■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms