Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.21■■□□□ 1.95
CAPN1P07384 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC27.21■■□□□ 1.95
CAPN1P07384 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC27.21■■□□□ 1.95
CAPN1P07384 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC27.21■■□□□ 1.95
CAPN1P07384 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
CAPN1P07384 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.18■■□□□ 1.94
CAPN1P07384 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CAPN1P07384 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
CAPN1P07384 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CAPN1P07384 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CAPN1P07384 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.94
CAPN1P07384 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
CAPN1P07384 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CAPN1P07384 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CAPN1P07384 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CAPN1P07384 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
CAPN1P07384 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.1■■□□□ 1.93
CAPN1P07384 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.09■■□□□ 1.93
CAPN1P07384 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CAPN1P07384 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
CAPN1P07384 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.08■■□□□ 1.93
CAPN1P07384 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.08■■□□□ 1.93
CAPN1P07384 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.08■■□□□ 1.93
CAPN1P07384 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CAPN1P07384 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CAPN1P07384 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.06■■□□□ 1.92
CAPN1P07384 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
CAPN1P07384 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.05■■□□□ 1.92
CAPN1P07384 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CAPN1P07384 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
CAPN1P07384 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.04■■□□□ 1.92
CAPN1P07384 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.04■■□□□ 1.92
CAPN1P07384 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.04■■□□□ 1.92
CAPN1P07384 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.04■■□□□ 1.92
CAPN1P07384 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CAPN1P07384 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CAPN1P07384 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CAPN1P07384 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
CAPN1P07384 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CAPN1P07384 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CAPN1P07384 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
CAPN1P07384 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
CAPN1P07384 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CAPN1P07384 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.96■■□□□ 1.91
CAPN1P07384 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.95■■□□□ 1.9
CAPN1P07384 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CAPN1P07384 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CAPN1P07384 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
CAPN1P07384 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
CAPN1P07384 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
CAPN1P07384 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CAPN1P07384 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CAPN1P07384 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.9■■□□□ 1.9
CAPN1P07384 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.9■■□□□ 1.9
CAPN1P07384 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
CAPN1P07384 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.88■■□□□ 1.89
CAPN1P07384 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
CAPN1P07384 RARRES2P7-201ENST00000567349 469 ntBASIC26.87■■□□□ 1.89
CAPN1P07384 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.86■■□□□ 1.89
CAPN1P07384 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
CAPN1P07384 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CAPN1P07384 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CAPN1P07384 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.85■■□□□ 1.89
CAPN1P07384 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CAPN1P07384 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CAPN1P07384 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.82■■□□□ 1.88
CAPN1P07384 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CAPN1P07384 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CAPN1P07384 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CAPN1P07384 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CAPN1P07384 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.8■■□□□ 1.88
CAPN1P07384 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.8■■□□□ 1.88
CAPN1P07384 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CAPN1P07384 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
CAPN1P07384 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.78■■□□□ 1.88
CAPN1P07384 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.78■■□□□ 1.88
CAPN1P07384 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CAPN1P07384 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.76■■□□□ 1.88
CAPN1P07384 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CAPN1P07384 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.76■■□□□ 1.87
CAPN1P07384 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.75■■□□□ 1.87
CAPN1P07384 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CAPN1P07384 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
CAPN1P07384 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.74■■□□□ 1.87
CAPN1P07384 AC120057.4-201ENST00000624722 1615 ntBASIC26.73■■□□□ 1.87
CAPN1P07384 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CAPN1P07384 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
CAPN1P07384 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CAPN1P07384 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.72■■□□□ 1.87
CAPN1P07384 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.71■■□□□ 1.87
CAPN1P07384 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.71■■□□□ 1.87
CAPN1P07384 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
CAPN1P07384 SETD8P1-201ENST00000623146 1180 ntBASIC26.68■■□□□ 1.86
CAPN1P07384 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.67■■□□□ 1.86
CAPN1P07384 AC136428.2-201ENST00000563187 214 ntBASIC26.66■■□□□ 1.86
CAPN1P07384 AC097358.2-201ENST00000607541 1159 ntBASIC26.66■■□□□ 1.86
CAPN1P07384 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CAPN1P07384 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CAPN1P07384 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CAPN1P07384 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms