Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRGV3P03979 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRGV3P03979 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.73■■□□□ 1.07
TRGV3P03979 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.71■■□□□ 1.07
TRGV3P03979 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.7■■□□□ 1.06
TRGV3P03979 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC21.69■■□□□ 1.06
TRGV3P03979 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC21.68■■□□□ 1.06
TRGV3P03979 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.68■■□□□ 1.06
TRGV3P03979 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRGV3P03979 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRGV3P03979 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TRGV3P03979 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
TRGV3P03979 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.67■■□□□ 1.06
TRGV3P03979 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC21.67■■□□□ 1.06
TRGV3P03979 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRGV3P03979 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.65■■□□□ 1.06
TRGV3P03979 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TRGV3P03979 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC21.65■■□□□ 1.06
TRGV3P03979 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.65■■□□□ 1.06
TRGV3P03979 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRGV3P03979 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRGV3P03979 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRGV3P03979 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRGV3P03979 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRGV3P03979 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRGV3P03979 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRGV3P03979 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.62■■□□□ 1.05
TRGV3P03979 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRGV3P03979 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.61■■□□□ 1.05
TRGV3P03979 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRGV3P03979 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.59■■□□□ 1.05
TRGV3P03979 RARRES2P7-201ENST00000567349 469 ntBASIC21.58■■□□□ 1.05
TRGV3P03979 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRGV3P03979 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.54■■□□□ 1.04
TRGV3P03979 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.53■■□□□ 1.04
TRGV3P03979 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.53■■□□□ 1.04
TRGV3P03979 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRGV3P03979 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRGV3P03979 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.5■■□□□ 1.03
TRGV3P03979 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRGV3P03979 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRGV3P03979 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRGV3P03979 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TRGV3P03979 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRGV3P03979 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRGV3P03979 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRGV3P03979 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRGV3P03979 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRGV3P03979 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRGV3P03979 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRGV3P03979 SETD8P1-201ENST00000623146 1180 ntBASIC21.44■■□□□ 1.02
TRGV3P03979 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRGV3P03979 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRGV3P03979 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
TRGV3P03979 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRGV3P03979 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21.42■■□□□ 1.02
TRGV3P03979 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.41■■□□□ 1.02
TRGV3P03979 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.41■■□□□ 1.02
TRGV3P03979 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRGV3P03979 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRGV3P03979 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.4■■□□□ 1.02
TRGV3P03979 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRGV3P03979 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRGV3P03979 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRGV3P03979 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.38■■□□□ 1.01
TRGV3P03979 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.38■■□□□ 1.01
TRGV3P03979 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRGV3P03979 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
TRGV3P03979 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRGV3P03979 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC21.36■■□□□ 1.01
TRGV3P03979 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TRGV3P03979 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRGV3P03979 AL133380.1-201ENST00000506013 324 ntBASIC21.35■■□□□ 1.01
TRGV3P03979 AC120057.4-201ENST00000624722 1615 ntBASIC21.35■■□□□ 1.01
TRGV3P03979 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRGV3P03979 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
TRGV3P03979 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRGV3P03979 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.32■■□□□ 1
TRGV3P03979 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRGV3P03979 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRGV3P03979 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRGV3P03979 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
TRGV3P03979 AC097358.2-201ENST00000607541 1159 ntBASIC21.3■■□□□ 1
TRGV3P03979 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRGV3P03979 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRGV3P03979 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRGV3P03979 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRGV3P03979 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRGV3P03979 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRGV3P03979 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
TRGV3P03979 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRGV3P03979 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRGV3P03979 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRGV3P03979 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRGV3P03979 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRGV3P03979 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TRGV3P03979 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
TRGV3P03979 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRGV3P03979 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.26■□□□□ 0.99
TRGV3P03979 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms