Protein–RNA interactions for Protein: P01911

HLA-DRB1, HLA class II histocompatibility antigen, DRB1-15 beta chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1P01911 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
HLA-DRB1P01911 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
HLA-DRB1P01911 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC22.1■■□□□ 1.13
HLA-DRB1P01911 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC22.09■■□□□ 1.13
HLA-DRB1P01911 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
HLA-DRB1P01911 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HLA-DRB1P01911 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HLA-DRB1P01911 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
HLA-DRB1P01911 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC22.07■■□□□ 1.12
HLA-DRB1P01911 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HLA-DRB1P01911 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC22.06■■□□□ 1.12
HLA-DRB1P01911 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HLA-DRB1P01911 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
HLA-DRB1P01911 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC22.04■■□□□ 1.12
HLA-DRB1P01911 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
HLA-DRB1P01911 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HLA-DRB1P01911 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
HLA-DRB1P01911 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC22.03■■□□□ 1.12
HLA-DRB1P01911 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
HLA-DRB1P01911 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
HLA-DRB1P01911 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HLA-DRB1P01911 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
HLA-DRB1P01911 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC22■■□□□ 1.11
HLA-DRB1P01911 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC22■■□□□ 1.11
HLA-DRB1P01911 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22■■□□□ 1.11
HLA-DRB1P01911 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC22■■□□□ 1.11
HLA-DRB1P01911 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22■■□□□ 1.11
HLA-DRB1P01911 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DRB1P01911 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.98■■□□□ 1.11
HLA-DRB1P01911 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.98■■□□□ 1.11
HLA-DRB1P01911 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC21.97■■□□□ 1.11
HLA-DRB1P01911 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HLA-DRB1P01911 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.96■■□□□ 1.11
HLA-DRB1P01911 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.96■■□□□ 1.11
HLA-DRB1P01911 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DRB1P01911 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DRB1P01911 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HLA-DRB1P01911 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.94■■□□□ 1.1
HLA-DRB1P01911 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.93■■□□□ 1.1
HLA-DRB1P01911 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DRB1P01911 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC21.91■■□□□ 1.1
HLA-DRB1P01911 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DRB1P01911 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.89■■□□□ 1.1
HLA-DRB1P01911 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HLA-DRB1P01911 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
HLA-DRB1P01911 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HLA-DRB1P01911 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HLA-DRB1P01911 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.85■■□□□ 1.09
HLA-DRB1P01911 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
HLA-DRB1P01911 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HLA-DRB1P01911 RARRES2P7-201ENST00000567349 469 ntBASIC21.84■■□□□ 1.09
HLA-DRB1P01911 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21.83■■□□□ 1.09
HLA-DRB1P01911 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.82■■□□□ 1.08
HLA-DRB1P01911 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-DRB1P01911 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HLA-DRB1P01911 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.8■■□□□ 1.08
HLA-DRB1P01911 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DRB1P01911 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DRB1P01911 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HLA-DRB1P01911 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.79■■□□□ 1.08
HLA-DRB1P01911 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.79■■□□□ 1.08
HLA-DRB1P01911 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HLA-DRB1P01911 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HLA-DRB1P01911 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.78■■□□□ 1.08
HLA-DRB1P01911 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HLA-DRB1P01911 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.76■■□□□ 1.07
HLA-DRB1P01911 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.76■■□□□ 1.07
HLA-DRB1P01911 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
HLA-DRB1P01911 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
HLA-DRB1P01911 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DRB1P01911 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HLA-DRB1P01911 AC120057.4-201ENST00000624722 1615 ntBASIC21.74■■□□□ 1.07
HLA-DRB1P01911 SETD8P1-201ENST00000623146 1180 ntBASIC21.73■■□□□ 1.07
HLA-DRB1P01911 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DRB1P01911 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.72■■□□□ 1.07
HLA-DRB1P01911 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DRB1P01911 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.72■■□□□ 1.07
HLA-DRB1P01911 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DRB1P01911 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DRB1P01911 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DRB1P01911 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DRB1P01911 AL133380.1-201ENST00000506013 324 ntBASIC21.71■■□□□ 1.07
HLA-DRB1P01911 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DRB1P01911 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.71■■□□□ 1.07
HLA-DRB1P01911 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DRB1P01911 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
HLA-DRB1P01911 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DRB1P01911 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DRB1P01911 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DRB1P01911 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DRB1P01911 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
HLA-DRB1P01911 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DRB1P01911 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
HLA-DRB1P01911 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DRB1P01911 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
HLA-DRB1P01911 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
HLA-DRB1P01911 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DRB1P01911 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
HLA-DRB1P01911 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DRB1P01911 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms