Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HERC2O95714 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC2O95714 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HERC2O95714 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.54■□□□□ 0.56
HERC2O95714 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
HERC2O95714 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HERC2O95714 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HERC2O95714 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HERC2O95714 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HERC2O95714 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
HERC2O95714 MIR639-201ENST00000384974 98 ntBASIC18.48■□□□□ 0.55
HERC2O95714 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.47■□□□□ 0.55
HERC2O95714 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.47■□□□□ 0.55
HERC2O95714 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.47■□□□□ 0.55
HERC2O95714 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HERC2O95714 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HERC2O95714 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.46■□□□□ 0.55
HERC2O95714 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.46■□□□□ 0.55
HERC2O95714 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC18.46■□□□□ 0.55
HERC2O95714 DUX4L28-201ENST00000623687 678 ntBASIC18.44■□□□□ 0.54
HERC2O95714 ZNRF2P2-203ENST00000454624 420 ntBASIC18.44■□□□□ 0.54
HERC2O95714 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
HERC2O95714 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
HERC2O95714 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HERC2O95714 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC2O95714 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC2O95714 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HERC2O95714 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC2O95714 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HERC2O95714 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HERC2O95714 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.38■□□□□ 0.53
HERC2O95714 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HERC2O95714 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HERC2O95714 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.36■□□□□ 0.53
HERC2O95714 AC044849.2-201ENST00000606596 710 ntBASIC18.36■□□□□ 0.53
HERC2O95714 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.34■□□□□ 0.53
HERC2O95714 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HERC2O95714 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.33■□□□□ 0.53
HERC2O95714 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.32■□□□□ 0.52
HERC2O95714 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.32■□□□□ 0.52
HERC2O95714 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HERC2O95714 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC18.31■□□□□ 0.52
HERC2O95714 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.26■□□□□ 0.51
HERC2O95714 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC2O95714 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.26■□□□□ 0.51
HERC2O95714 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.26■□□□□ 0.51
HERC2O95714 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.25■□□□□ 0.51
HERC2O95714 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HERC2O95714 MIR762-201ENST00000390236 83 ntBASIC18.22■□□□□ 0.51
HERC2O95714 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.22■□□□□ 0.51
HERC2O95714 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HERC2O95714 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HERC2O95714 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC2O95714 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HERC2O95714 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC2O95714 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HERC2O95714 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.19■□□□□ 0.5
HERC2O95714 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.19■□□□□ 0.5
HERC2O95714 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.18■□□□□ 0.5
HERC2O95714 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HERC2O95714 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HERC2O95714 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HERC2O95714 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HERC2O95714 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HERC2O95714 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HERC2O95714 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HERC2O95714 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HERC2O95714 AL133380.1-201ENST00000506013 324 ntBASIC18.11■□□□□ 0.49
HERC2O95714 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HERC2O95714 AC005559.1-201ENST00000589661 871 ntBASIC18.11■□□□□ 0.49
HERC2O95714 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
HERC2O95714 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.1■□□□□ 0.49
HERC2O95714 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HERC2O95714 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.09■□□□□ 0.49
HERC2O95714 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.08■□□□□ 0.48
HERC2O95714 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HERC2O95714 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HERC2O95714 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HERC2O95714 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HERC2O95714 MIR3648-2-201ENST00000581792 180 ntBASIC18.07■□□□□ 0.48
HERC2O95714 MIR3648-1-201ENST00000615959 180 ntBASIC18.07■□□□□ 0.48
HERC2O95714 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
HERC2O95714 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.05■□□□□ 0.48
HERC2O95714 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.05■□□□□ 0.48
HERC2O95714 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.05■□□□□ 0.48
HERC2O95714 AC019069.1-201ENST00000610008 1333 ntBASIC18.05■□□□□ 0.48
HERC2O95714 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HERC2O95714 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.05■□□□□ 0.48
HERC2O95714 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HERC2O95714 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
HERC2O95714 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.03■□□□□ 0.48
HERC2O95714 RARRES2P2-201ENST00000394842 485 ntBASIC18.02■□□□□ 0.48
HERC2O95714 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.02■□□□□ 0.47
HERC2O95714 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HERC2O95714 AC016575.1-201ENST00000607026 382 ntBASIC18.01■□□□□ 0.47
HERC2O95714 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.01■□□□□ 0.47
HERC2O95714 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HERC2O95714 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
HERC2O95714 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18■□□□□ 0.47
HERC2O95714 CR559946.2-201ENST00000623684 991 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms