Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 MIR3665-201ENST00000578708 105 ntBASIC26.79■■□□□ 1.88
RRP8O43159 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.78■■□□□ 1.88
RRP8O43159 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.78■■□□□ 1.88
RRP8O43159 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
RRP8O43159 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
RRP8O43159 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RRP8O43159 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
RRP8O43159 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RRP8O43159 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.74■■□□□ 1.87
RRP8O43159 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.74■■□□□ 1.87
RRP8O43159 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
RRP8O43159 HLA-V-202ENST00000446817 847 ntBASIC26.72■■□□□ 1.87
RRP8O43159 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
RRP8O43159 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.69■■□□□ 1.86
RRP8O43159 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.68■■□□□ 1.86
RRP8O43159 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.67■■□□□ 1.86
RRP8O43159 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.66■■□□□ 1.86
RRP8O43159 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RRP8O43159 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.65■■□□□ 1.86
RRP8O43159 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.64■■□□□ 1.86
RRP8O43159 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.64■■□□□ 1.86
RRP8O43159 AL133380.1-201ENST00000506013 324 ntBASIC26.63■■□□□ 1.85
RRP8O43159 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.62■■□□□ 1.85
RRP8O43159 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
RRP8O43159 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RRP8O43159 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RRP8O43159 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.59■■□□□ 1.85
RRP8O43159 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.58■■□□□ 1.85
RRP8O43159 AC044849.2-201ENST00000606596 710 ntBASIC26.58■■□□□ 1.85
RRP8O43159 AC087741.3-201ENST00000624270 1347 ntBASIC26.58■■□□□ 1.85
RRP8O43159 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RRP8O43159 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RRP8O43159 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
RRP8O43159 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RRP8O43159 AC145285.7-201ENST00000614819 1539 ntBASIC26.53■■□□□ 1.84
RRP8O43159 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RRP8O43159 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
RRP8O43159 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.5■■□□□ 1.83
RRP8O43159 DUX4L28-201ENST00000623687 678 ntBASIC26.48■■□□□ 1.83
RRP8O43159 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.47■■□□□ 1.83
RRP8O43159 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
RRP8O43159 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.47■■□□□ 1.83
RRP8O43159 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.47■■□□□ 1.83
RRP8O43159 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
RRP8O43159 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
RRP8O43159 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.44■■□□□ 1.82
RRP8O43159 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
RRP8O43159 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
RRP8O43159 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
RRP8O43159 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RRP8O43159 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
RRP8O43159 AC005559.1-201ENST00000589661 871 ntBASIC26.41■■□□□ 1.82
RRP8O43159 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.4■■□□□ 1.82
RRP8O43159 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.39■■□□□ 1.82
RRP8O43159 MIR762-201ENST00000390236 83 ntBASIC26.39■■□□□ 1.82
RRP8O43159 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.39■■□□□ 1.82
RRP8O43159 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.39■■□□□ 1.82
RRP8O43159 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RRP8O43159 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RRP8O43159 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.36■■□□□ 1.81
RRP8O43159 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RRP8O43159 ZNRF2P2-203ENST00000454624 420 ntBASIC26.35■■□□□ 1.81
RRP8O43159 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.34■■□□□ 1.81
RRP8O43159 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.33■■□□□ 1.81
RRP8O43159 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.32■■□□□ 1.8
RRP8O43159 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RRP8O43159 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.32■■□□□ 1.8
RRP8O43159 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.32■■□□□ 1.8
RRP8O43159 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.32■■□□□ 1.8
RRP8O43159 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.29■■□□□ 1.8
RRP8O43159 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RRP8O43159 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.27■■□□□ 1.8
RRP8O43159 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RRP8O43159 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RRP8O43159 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RRP8O43159 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.23■■□□□ 1.79
RRP8O43159 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RRP8O43159 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.23■■□□□ 1.79
RRP8O43159 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RRP8O43159 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.22■■□□□ 1.79
RRP8O43159 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.22■■□□□ 1.79
RRP8O43159 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RRP8O43159 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
RRP8O43159 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
RRP8O43159 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RRP8O43159 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RRP8O43159 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RRP8O43159 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
RRP8O43159 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
RRP8O43159 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RRP8O43159 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RRP8O43159 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.12■■□□□ 1.77
RRP8O43159 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
RRP8O43159 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
RRP8O43159 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.09■■□□□ 1.77
RRP8O43159 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.09■■□□□ 1.77
RRP8O43159 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RRP8O43159 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RRP8O43159 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.07■■□□□ 1.76
RRP8O43159 MIR4449-201ENST00000578365 66 ntBASIC26.07■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms