Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC28.47■■■□□ 2.15
NPC1O15118 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
NPC1O15118 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
NPC1O15118 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC28.42■■■□□ 2.14
NPC1O15118 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC28.42■■■□□ 2.14
NPC1O15118 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NPC1O15118 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NPC1O15118 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.4■■■□□ 2.14
NPC1O15118 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
NPC1O15118 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NPC1O15118 AL133380.1-201ENST00000506013 324 ntBASIC28.38■■■□□ 2.13
NPC1O15118 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
NPC1O15118 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
NPC1O15118 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
NPC1O15118 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC28.35■■■□□ 2.13
NPC1O15118 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
NPC1O15118 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC28.34■■■□□ 2.13
NPC1O15118 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC28.34■■■□□ 2.13
NPC1O15118 CAHM-201ENST00000604200 896 ntBASIC28.34■■■□□ 2.13
NPC1O15118 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.34■■■□□ 2.13
NPC1O15118 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NPC1O15118 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC28.32■■■□□ 2.12
NPC1O15118 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
NPC1O15118 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NPC1O15118 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC28.3■■■□□ 2.12
NPC1O15118 AL391121.1-201ENST00000607967 1349 ntBASIC28.3■■■□□ 2.12
NPC1O15118 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
NPC1O15118 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NPC1O15118 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
NPC1O15118 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
NPC1O15118 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
NPC1O15118 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
NPC1O15118 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
NPC1O15118 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
NPC1O15118 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC28.22■■■□□ 2.11
NPC1O15118 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.21■■■□□ 2.11
NPC1O15118 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
NPC1O15118 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.19■■■□□ 2.1
NPC1O15118 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
NPC1O15118 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
NPC1O15118 AP006261.1-201ENST00000584783 668 ntBASIC28.17■■■□□ 2.1
NPC1O15118 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
NPC1O15118 RPS2P35-201ENST00000443417 897 ntBASIC28.15■■■□□ 2.1
NPC1O15118 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.14■■■□□ 2.1
NPC1O15118 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.13■■■□□ 2.09
NPC1O15118 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
NPC1O15118 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.07■■■□□ 2.08
NPC1O15118 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
NPC1O15118 AL162393.1-201ENST00000437852 946 ntBASIC28.02■■■□□ 2.08
NPC1O15118 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.02■■■□□ 2.08
NPC1O15118 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
NPC1O15118 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.98■■■□□ 2.07
NPC1O15118 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.98■■■□□ 2.07
NPC1O15118 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
NPC1O15118 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.97■■■□□ 2.07
NPC1O15118 MIR3665-201ENST00000578708 105 ntBASIC27.97■■■□□ 2.07
NPC1O15118 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
NPC1O15118 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
NPC1O15118 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.96■■■□□ 2.07
NPC1O15118 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.95■■■□□ 2.06
NPC1O15118 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
NPC1O15118 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
NPC1O15118 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.92■■■□□ 2.06
NPC1O15118 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
NPC1O15118 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
NPC1O15118 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.91■■■□□ 2.06
NPC1O15118 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
NPC1O15118 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.91■■■□□ 2.06
NPC1O15118 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
NPC1O15118 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
NPC1O15118 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
NPC1O15118 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.88■■■□□ 2.05
NPC1O15118 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.86■■■□□ 2.05
NPC1O15118 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
NPC1O15118 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
NPC1O15118 MIR762-201ENST00000390236 83 ntBASIC27.84■■■□□ 2.05
NPC1O15118 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.84■■■□□ 2.05
NPC1O15118 WASH5P-204ENST00000632292 975 ntBASIC27.84■■■□□ 2.05
NPC1O15118 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
NPC1O15118 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC27.84■■■□□ 2.05
NPC1O15118 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
NPC1O15118 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
NPC1O15118 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
NPC1O15118 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
NPC1O15118 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.79■■■□□ 2.04
NPC1O15118 AC005559.1-201ENST00000589661 871 ntBASIC27.78■■■□□ 2.04
NPC1O15118 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
NPC1O15118 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.78■■■□□ 2.04
NPC1O15118 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
NPC1O15118 DUX4L28-201ENST00000623687 678 ntBASIC27.76■■■□□ 2.03
NPC1O15118 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
NPC1O15118 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
NPC1O15118 AC087741.3-201ENST00000624270 1347 ntBASIC27.74■■■□□ 2.03
NPC1O15118 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
NPC1O15118 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
NPC1O15118 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.73■■■□□ 2.03
NPC1O15118 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
NPC1O15118 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
NPC1O15118 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.71■■■□□ 2.03
NPC1O15118 AC044849.2-201ENST00000606596 710 ntBASIC27.7■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms