Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
AP3D1O14617 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
AP3D1O14617 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
AP3D1O14617 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
AP3D1O14617 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.71
AP3D1O14617 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.7■■□□□ 1.7
AP3D1O14617 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
AP3D1O14617 DYNLL1-208ENST00000550178 581 ntBASIC25.7■■□□□ 1.7
AP3D1O14617 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.7■■□□□ 1.7
AP3D1O14617 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
AP3D1O14617 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
AP3D1O14617 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC25.69■■□□□ 1.7
AP3D1O14617 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
AP3D1O14617 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
AP3D1O14617 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.67■■□□□ 1.7
AP3D1O14617 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
AP3D1O14617 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
AP3D1O14617 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
AP3D1O14617 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
AP3D1O14617 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
AP3D1O14617 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
AP3D1O14617 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
AP3D1O14617 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
AP3D1O14617 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
AP3D1O14617 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
AP3D1O14617 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
AP3D1O14617 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC25.6■■□□□ 1.69
AP3D1O14617 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
AP3D1O14617 AP002365.1-201ENST00000603448 772 ntBASIC25.59■■□□□ 1.69
AP3D1O14617 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
AP3D1O14617 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
AP3D1O14617 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC25.57■■□□□ 1.68
AP3D1O14617 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
AP3D1O14617 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
AP3D1O14617 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
AP3D1O14617 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC25.56■■□□□ 1.68
AP3D1O14617 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
AP3D1O14617 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.55■■□□□ 1.68
AP3D1O14617 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
AP3D1O14617 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.54■■□□□ 1.68
AP3D1O14617 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC25.53■■□□□ 1.68
AP3D1O14617 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
AP3D1O14617 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
AP3D1O14617 AL031258.1-201ENST00000623562 325 ntBASIC25.52■■□□□ 1.68
AP3D1O14617 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
AP3D1O14617 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
AP3D1O14617 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
AP3D1O14617 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.5■■□□□ 1.67
AP3D1O14617 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.5■■□□□ 1.67
AP3D1O14617 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.48■■□□□ 1.67
AP3D1O14617 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.48■■□□□ 1.67
AP3D1O14617 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.66
AP3D1O14617 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
AP3D1O14617 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
AP3D1O14617 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
AP3D1O14617 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.43■■□□□ 1.66
AP3D1O14617 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
AP3D1O14617 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
AP3D1O14617 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
AP3D1O14617 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
AP3D1O14617 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
AP3D1O14617 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
AP3D1O14617 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
AP3D1O14617 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
AP3D1O14617 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
AP3D1O14617 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.37■■□□□ 1.65
AP3D1O14617 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.36■■□□□ 1.65
AP3D1O14617 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
AP3D1O14617 AC120057.4-201ENST00000624722 1615 ntBASIC25.35■■□□□ 1.65
AP3D1O14617 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
AP3D1O14617 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
AP3D1O14617 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC25.33■■□□□ 1.65
AP3D1O14617 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
AP3D1O14617 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
AP3D1O14617 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
AP3D1O14617 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC25.32■■□□□ 1.64
AP3D1O14617 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.31■■□□□ 1.64
AP3D1O14617 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
AP3D1O14617 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.3■■□□□ 1.64
AP3D1O14617 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
AP3D1O14617 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
AP3D1O14617 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.28■■□□□ 1.64
AP3D1O14617 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.27■■□□□ 1.64
AP3D1O14617 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
AP3D1O14617 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
AP3D1O14617 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.27■■□□□ 1.64
AP3D1O14617 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
AP3D1O14617 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
AP3D1O14617 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
AP3D1O14617 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
AP3D1O14617 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.23■■□□□ 1.63
AP3D1O14617 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.23■■□□□ 1.63
AP3D1O14617 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
AP3D1O14617 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
AP3D1O14617 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.2■■□□□ 1.62
AP3D1O14617 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
AP3D1O14617 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.18■■□□□ 1.62
AP3D1O14617 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.18■■□□□ 1.62
AP3D1O14617 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
AP3D1O14617 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms